Sorghum bicolor (sorghum): 8058425
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Entry
8058425 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC8058425
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
8058425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8058425
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
8058425
DNA repair and recombination proteins [BR:
sbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
8058425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
8058425
NCBI-ProteinID:
XP_002438758
UniProt:
C5Z6U0
LinkDB
All DBs
Position
10:complement(55349832..55353361)
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AA seq
412 aa
AA seq
DB search
MAGAPRVRSLNIAVPEAEARPVLVPGGNKARSGPANARKPSPKPLRKAVGTPEKPAAAAP
KAEEGAKRNAVGGGGGGAPKGASPMPSPRRTPPGPPLRRSDAPLLHPGLPLSASSCSSDA
SAESVRVRAFTGKVEKGRSGPMAASKQGKTMGKTAESKPVVVEFVAPVTPEVVEGKRRCA
WATPTTDPCYVTFHDEEWGVPVHNDRRLFELLVLSGALAELTWPEILKRRQLFREIFMEF
DPAAISKINEKKLVAPGSTAHSLLSEQKLRVVLENARQILKIVDEFGSFDRYCWGFLNHK
PIVSKFRYPRQVPVKSPKADIISKDMMRRGFRGVGPTVIYSFMQAAGLTNDHLVSCFRFE
QCNAIPTLCTSDIDRVNMKADPKKDEMTTKIYCEEITTNPEMPRTIDALIVS
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggccggggcaccgagggtccggtccctgaacatcgcggttccggaggcagaggcgagg
ccggtgctggtgccggggggcaacaaggccaggtcgggcccggcgaacgcccggaaaccg
tcgccgaagcccctgaggaaggcggtggggacgccagagaagcctgcggctgccgcaccc
aaggcggaggagggcgcaaagaggaatgcagtcggcgggggcggaggtggcgcgcccaag
ggtgcgtcccctatgccgtcgccgcggcgcacaccccctgggccgccgttgaggaggagc
gacgcgccgctgttgcatccgggcttgccgctcagcgcgtcgtcttgctcctcggatgcc
tccgcggagtcggtccgcgtccgggctttcactgggaaagtggagaagggccggtcgggg
ccgatggctgcgtcgaagcaaggcaaaactatgggtaagacggcagagagcaagcccgtc
gtggtggagtttgttgctccggtgacaccagaggttgtggaagggaagaggaggtgcgct
tgggcgactccaactactgatccttgctatgtcactttccatgatgaggagtggggggtt
cctgtgcacaatgacaggagattgtttgagctacttgtactatctggtgcattggctgag
cttacatggcctgaaattctcaagaggaggcaacttttcagggaaattttcatggagttt
gaccctgctgctatctctaaaataaatgagaagaagcttgtggcacctggaagcactgcc
cattctcttttgtcagagcaaaagctccgagtggtccttgagaatgctcgccagatacta
aagattgttgatgaatttggatcctttgatcggtactgctggggttttctgaaccacaag
cctatagtgagcaagttccgatatccaagacaagttcctgtcaagagcccaaaggcagat
ataatcagcaaagacatgatgagaaggggattccgaggtgtgggcccaacggtcatatat
tccttcatgcaggctgcaggtctaacaaatgatcacctggtcagttgcttccggttcgaa
caatgcaatgccattccaactctttgcacaagtgacattgacagggtaaacatgaaggca
gatccaaaaaaagatgagatgacaacgaagatttattgtgaagagattaccacaaaccca
gagatgccaaggacgattgatgctcttattgtttcgtag
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