KEGG   Sorghum bicolor (sorghum): 8058454
Entry
8058454           CDS       T01086                                 
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g18940, chloroplastic
  KO
K17710  pentatricopeptide repeat domain-containing protein 1
Organism
sbi  Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sbi03016]
    8058454
   03029 Mitochondrial biogenesis [BR:sbi03029]
    8058454
Transfer RNA biogenesis [BR:sbi03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    8058454
Mitochondrial biogenesis [BR:sbi03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    8058454
SSDB
Motif
Pfam: PPR_2 PPR PPR_3 PPR_1 PPR_long TPR_14 TPR_19 TPR_12 ECSIT_N Exog_C Clathrin Mtf2 TPR-S TPR_16 ENCP4 RPN7 DUF4256
Other DBs
NCBI-GeneID: 8058454
NCBI-ProteinID: XP_002437396
LinkDB
Position
10:55836457..55839475
AA seq 786 aa
MEATGRGLFPNKPTLPAGPRKRGPLIPAAPPPPSPSSLPLDSLLLHLTAAPAPAPAPRRS
HPTPTPPHSFLSPAAQALVLAISSHPLPTLPAFLASRRDELLPADIPSLLKALELSGHWE
WALALLRWAGAEGAADASALEMVVRALGREGQHDAVCALLDEMPLPPGSRLDVRAYTTVL
HALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGV
EPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALR
VLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYG
NIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRV
TWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEM
TSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNI
AGIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSM
LSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQV
KPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEARE
VINYMIQHNLKPMELTYRRVVDSYCKAKRFEEARSFLSEVSETDPNFDKKVLHTLAAYIE
DAQFGR
NT seq 2361 nt   +upstreamnt  +downstreamnt
atggaggccaccggccggggcctgttcccgaacaagcccaccctcccggcggggccgagg
aagcggggcccgctcatcccggccgcgcccccgccgccgtcgccctcctcgctcccgctc
gactcgctcctgctccacctcaccgcggcgccggcgccggcccccgcgccgcggcggtcg
cacccgacaccgacgccgccgcactccttcctctcccccgccgcgcaggcgctggtgctc
gccatctcctcgcacccgctcccgacactcccggccttcctcgcctcccgccgcgacgag
ctcctccccgcggacatcccgtccttgctcaaggcgctcgagctctcggggcactgggag
tgggcgctcgcgctcctccgatgggccggcgccgagggcgccgccgacgcgtccgcgctc
gagatggtcgtccgcgcgctggggcgcgagggccagcacgacgccgtctgcgcgctgctc
gacgaaatgccgctcccgcccgggtcccgcctcgacgtccgcgcctacaccaccgtgctg
cacgcgctctcccgggcgggtcggtacgagcgcgcggtcgagctcttcgccgagctccgg
cggcagggggtggcgcccacgctcgtcacctacaacgtcgtgctcgacgtgtacggccgg
atgggccgctcgtggccacggattgttgccctcctagatgagatgcgggccgccggggtc
gagcctgacgacttcactgccagcacggtgatcgccgcgtgctgccgtgatgggcttgtt
gatgaggcggtggcattcttcgaggacctcaaggcccggggccacaccccatgcgtcgtc
acctacaatgcgctgctccaggtgtttggcaaggccggaaactacacggaggcgctgcgt
gtgcttaaggagatggagcaggacggctgtcagccagatgctgtgacgtacaatgagctc
gccggaacatatgcccgggctgggttctacgaggaggctgccaagtgcctggacacaatg
acatccaagggtttattgccaaacgcattcacatataacaccgtcatgacagcttatggg
aatattgggaaggtggatgaggcacttgccctgtttgaccagatgaagaagagcgggtgt
gtgccgaatgtgaacacatacaattttatccttggcatgcttggcaagaaatcaaggttc
actgtgatgctagagatgcttggagagatgtcaaggagtggatgcacaccaaatcgggtc
acatggaacacaatgcttgcggtctgtgggaagcgtggcatggaggactatgtcacccgg
gttctggaggggatgaagtcttgtggggttgaactgagccgagacacctacaacaccctg
atagctgcatatggtcggtgtggctcaaggactaatgctttcaagatgtacaatgaaatg
accagtgctgggttcgccccctgcctcaccacatacaacgcattgttgaatgtgctatca
cgacaaggtgattggtccactgctcagtcaatcgtaagcaaaatgaggaccaaggggttt
aagccaaatgatcagtcatattcactattgctccagtgttatgcaaaagggggcaacatt
gcagggatagatgcaatcgaaaaagaagtttacggaggtaccgttttcccaagttgggtt
atcttgaggacccttgtcattgccaatttcaagtgccgacgattgggtggcattgagaag
gcatttcaagaggtaaaggccagaggttacaatcctgacctcgtcatattcaactccatg
ctgtcaatgtatgcaaaaaacgggatgtacagcaaggtcaccgagatcttcgattcaatc
aagcagagcgggctaagccccgacctcatcacttacaatagcttgatggacatgtacgca
aagtgtagtgaatcgtgggaggctgagaagatactgaatcagctcaaaagctctcaggtg
aagcctgacgttgtgtcctataacacggtcataaacggattctgcaagcaagggctgatc
aaagaagctcagaggatcctctccgagatgatcgctgacggcatggctccctgtgttgta
acctatcacacactcgttgggggatacgccagcctggagatgttcagcgaagctagagag
gttatcaactacatgattcagcacaacctgaagcccatggagctgacctacaggagagta
gtcgatagttactgcaaagcgaagcgatttgaggaggctcgcagcttcctgtctgaggtt
tcagaaactgacccgaattttgataagaaagtgctgcatacgctcgcagcctatatagag
gatgcacagtttggaaggtag

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