Sorghum bicolor (sorghum): 8058857
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Entry
8058857 CDS
T01086
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
8058857
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbi04040
]
8058857
Ion channels [BR:
sbi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
8058857
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
8058857
NCBI-ProteinID:
XP_021305320
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All DBs
Position
10:44648956..44671903
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AA seq
691 aa
AA seq
DB search
MMMGREDKYVRFQDWRSEQSVSSDNIVAPHRDDVSVFSSLKERTARVFALLGNLLHSETS
NRSMFDERKSGRGTLHPQGPFLQKWNRIFVISCIFAVSVDPLFLYIPVINDEKPCWYLDR
KLEMAASVLRFFTDIFYILHIIFQFRTGFIASSPTTFGRGVLNEDRCAIIKRYLSTYFFI
DVFAILPIPQVIILVVLPNLQGSKVMKAKNVLMLIIICQYVPRLIRIRPLYLQITRSAGV
ITETARAGAAFNLLLYMLASHVLGALWYLLSIQRQDSCWRQHCRSNKTCNLSYLYCGDYD
NDEGNAFLTKSCQPRNQPNLPDPYFGIYAPAIQNVSQSKSFFEKLFFCVWWGLQNLSSLG
QNLKTSTYAWENLFAVFVSISGLVLFALLIGNVQTYLQSASLRIEEMRVKSRDTDQWMSY
RHLPENLKERIRRYEQYRWQETSGVDEEQLLMNLPKDLRRDIKRHLCLSLLMRVCSHLSP
ILYTEGSCVIREGDPVNERLFVMRGNLMSMTTNGGRTGFFNSDVLKAGDFCGEELLTWAL
DPTSTSSLPSSTRTVKTMSEVEAFALRAEDLRFVATQFRRLHSKQLQHTFRFYSQQWRTW
AACFIQAAWHRYCRKKIEDSLRAKEKRLQFAIANDSSTSLSFMAALYASRFAGNMIRILR
RNATRKARLQERVPARLLQKPAEPNFSAEEQ
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgggaagagaggacaaatatgtgagatttcaggactggagatcagagcagtct
gttagttctgacaacatagttgctccacatagagatgatgtttcagtattcagttcactt
aaagaaaggactgccagggtttttgcattgctaggaaatcttttgcactcagaaacttca
aatagatcaatgtttgatgaaagaaagtctggaagaggaacacttcatcctcaagggcca
tttctgcagaaatggaacaggatatttgtgatatcatgtatatttgcagtttcagtggat
ccattgttcttgtatatcccagttatcaatgatgaaaaaccttgctggtatttggataga
aagttggaaatggcagcaagtgtcctgcgttttttcacagatattttctacatactccat
atcatatttcagttccggacaggctttattgcatcatctcctacaacctttgggcggggt
gtcttaaacgaagatagatgtgcaataataaagcgctacttatcaacatatttttttatt
gatgtctttgctattctgcccatccctcaggttattattttggttgtgctacctaatctt
caaggctcaaaggttatgaaagccaaaaatgtgttaatgcttataattatatgccagtat
gtgcctcggctaatccgaataaggccactgtacctccaaatcacaaggtctgctggtgta
attacagagacagcacgggctggtgctgctttcaaccttttgctttacatgcttgccagc
catgtccttggagctctttggtacttgctttctattcaacgccaagattcctgctggaga
cagcattgtagaagcaataagacatgtaatctttcctatttgtactgtggagattatgat
aacgatgagggaaatgctttcttaactaaaagttgccaaccaagaaatcagccaaacctt
ccagatccgtactttgggatttatgcaccagctatacaaaatgtatcacagtcaaaaagt
ttctttgagaaattgttcttctgtgtttggtggggtcttcaaaatcttagttctcttggc
caaaacctgaaaacaagcacttatgcatgggagaacttattcgcagtgtttgtctcaata
tcaggtttagttctgtttgcattgctgatcggtaatgtgcagacctatttgcaatcagcc
tctctgagaatagaagaaatgagagtgaaaagccgtgacacagatcagtggatgtcatat
cgacatcttcctgagaacctcaaggaaagaatacggcgttatgaacagtatagatggcaa
gaaacaagtggtgttgatgaagagcaacttcttatgaacctccccaaagatcttaggagg
gatataaaacgacatctctgtttatcgcttctcatgagggtatgttctcatctgtccccc
atcctatacacagaaggtagctgtgttattcgtgaaggagatccagtaaatgaaaggctc
ttcgtcatgaggggaaacctaatgagcatgacgacaaatggtggaagaactggcttcttt
aactctgatgttctgaaagctggagatttctgtggcgaagagctcctcacctgggctctt
gaccccacatcaacatccagcctccccagctcaacaaggacagtgaagacaatgtctgaa
gtcgaagcttttgctttgagggctgaagacttaaggtttgtggcaactcagttccgacga
ctccacagcaaacaactccagcacactttcagattctactcgcaacaatggagaacctgg
gccgcatgtttcatccaagcagcctggcaccggtactgcagaaagaagattgaagattct
ttgcgtgcgaaggagaagagattgcaattcgcgattgccaatgacagctccacttcgctt
agcttcatggcagcactatatgcttcgcgtttcgctggaaacatgatacggatcctgagg
agaaatgccacgcgcaaggccaggctgcaggaaagagtgcctgcaagactgttgcagaaa
ccagcagagcccaacttttcggcagaagagcagtag
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