Sorghum bicolor (sorghum): 8059044
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Entry
8059044 CDS
T01086
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
8059044
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbi04040
]
8059044
Ion channels [BR:
sbi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
8059044
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
8059044
NCBI-ProteinID:
XP_002453627
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Position
4:complement(11172971..11185478)
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AA seq
642 aa
AA seq
DB search
MKPSSARVLDPRGPFLQKWNKIFVISCLVSVSVDSLFFYVPAIDGDNSCLYLDDNLQKIA
SILRSLTDLFYLLRVIFQFRTGFAARSSSGAFGRGVLVHDMLAIAKRYLSTYFLNDILAI
LPLPQVFVWLMRPHLQGSKVMTAKNVLMFIILFQYVPRLIRIIPLYLEITRSAGTVMDTA
WPGAAFNLVVYILASHVLGALWYILAIQRQDTCWREACNSQDGCDLATLYCGSTAFGNNT
FLQDACSTNGGDDVDPIFGIYLPVLQNVSESTGFFEKLFYCFWWGLQSLCSYGQNLKTST
YIWENMFAVFVSMSGLVLFALLIGNVQTYLQSASGHIEEMRVIRRDTEQWMSYRLLPEHI
KQRILRHDQYRWQETQGVDEEGLLINLPKDLRRDIKRHLCLSLLLRVPMFENMDDQLLDA
MCDHVKPMLYTEGSCIIREGDPVNEMFFIMGGRLESMTTDGGRTGFFNSNVLQGGDFCGE
ELLTWALDPASGSSLPSSTRTVKALSELEGFALRAHHLKFVANQYRRLHSKQLRHTFRFY
SQQWRTWAACFIQEAWHRYCRRKLEDSLSLYEKERMFQAAIVTDVDSSSRSLGAALYAAR
FASNMLRILRRNAARKTRLLERVSSGLLLQKPAEPNFFADEG
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccagcagcgcaagagttcttgatccccgggggccatttctacagaaatggaac
aagatatttgtgatatcatgccttgtttcagtctccgtggactcgctcttcttctatgtc
ccggcaatcgacggcgacaacagctgcctgtatctggatgacaatctgcaaaagatagct
agcatcctgcgctctctcaccgatctcttctatctactccgcgtaatattccagttcagg
acaggcttcgcagctcgctcatcttccggagcgtttggtcgtggggtcttggttcatgac
atgttggcaatagcaaagcggtatctatcgacatattttctgaatgacatcttagctatt
ctgccccttcctcaggtttttgtgtggttaatgcggccacatctccaaggttcaaaggtt
atgactgcaaaaaacgtactgatgttcataatcttgttccaatatgtgcctcgactgatc
agaataataccactctaccttgaaatcacgagatcagctggtacagtaatggatactgca
tggccgggtgctgcctttaatcttgtagtttatatactcgctagtcatgtccttggagct
ctttggtacattcttgccatacagcgacaagacacctgttggagagaagcttgtaatagc
caggatggttgtgatctggcaactttatattgtggaagtactgcatttggaaacaatacg
ttcttacaagatgcttgctcaacaaatggcggtgacgatgtagatccaatatttggaatt
tatctaccagttctccagaatgtttcagaatcaacaggtttcttcgaaaaattattctac
tgcttttggtgggggctacaaagtctatgttcttatggtcaaaacctgaaaacaagcact
tacatatgggagaatatgtttgctgtttttgtctcaatgtcaggtttagttttgtttgct
ctcctcataggaaatgttcagacctatttacaatcagcctccggccatatagaggaaatg
agagtgataagacgtgacacggagcaatggatgtcatacagattgcttccagagcatatc
aagcaacgaatattgcgtcatgatcaatatagatggcaagaaacacaaggtgtggatgaa
gagggtcttcttataaaccttcctaaggatctcaggagggatataaagcgtcatctttgt
ctatcacttctcttgagggttccaatgtttgaaaacatggacgatcagctcttagacgcc
atgtgtgatcacgtaaaacccatgctgtacacagaaggaagctgcatcatccgcgaaggc
gacccagtgaacgagatgttcttcatcatgggagggagacttgagagcatgacaacagat
ggcgggcgaacgggcttcttcaactccaatgtcctccaaggcggcgatttctgcggcgaa
gagctcctcacatgggctctggatcctgcttcgggctcaagcctccccagctcaaccagg
acggtgaaggcgctgtcggagctcgaaggtttcgccttgagggctcatcacctgaagttt
gtggccaaccagtacaggaggctccacagcaagcagctccggcacaccttcagattctac
tcccagcaatggcgtacgtgggctgcttgcttcatacaggaagcttggcacaggtattgc
agaaggaagctggaggacagcctgagcctgtacgagaaggagaggatgttccaagcagca
attgtgactgacgtcgactctagttctcgcagccttggcgcggcgctctacgctgcccgt
ttcgcttccaacatgctacggatcttacggagaaacgctgcccgaaagacgcgtttgctg
gaaagagtgtcttcagggctgttgttacagaagccagcagaacccaacttcttcgctgat
gaagggtga
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