Sorghum bicolor (sorghum): 8059045
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Entry
8059045 CDS
T01086
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
8059045
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbi04040
]
8059045
Ion channels [BR:
sbi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
8059045
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
8059045
NCBI-ProteinID:
XP_021314842
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Position
4:complement(11186436..11198298)
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AA seq
704 aa
AA seq
DB search
MAGREERYVRFQDWKSEQSVSVTSDRVNSERGHTIFGLLKDTTAGAFSFLGNSSHSEALN
KSGPEEKKSKTRVLDPQGPFLQRWNKIFVISCLFAVFVDPLFLYIPVIDGGKNCLYLDKK
LETVASILRFFTDIFYLLHMLFQFRTGFIAPSSRVFGRGVLVKDTFAIAKRYISTLFLVD
FLAVLPLPQVFVLVVLPTLQGPEVMKAKIVLLVIIICQYVPRLLRIIPLYLQITRSAGIL
TETAWAGAAFNLIIYMLASHGFGALWYILSIQREDTCWRQACNNQTSCELTSLYCGYHPL
ANNSFLQSACPTNSTSNSNPDPIFGIFLPALQNVSQSTSFFEKLFYCFWWGLQNLSSLGQ
NMKTSTNTLENLFAVFVSTSGLVLFALLIGNVQTYLQSASVRIEEMRVKRRDTEQWMAHR
LLPENLKDRIMHHEQYRWQETRGVDEEGLLKNLPKDLRREIKRHLCLSLLMKVPMFENMD
EQLLDAMCDRLKPMLYTEGSCIIREGDPVNEMLFIMRGTLESTTTNGGQTGFFNSNVLKG
GDFCGEELLTWALDPTSASNLPGSTRTVKTLSEVEAFALRADDLKFVATQFRRLHSKQLQ
HTFRFYSQQWRTWAACFIQAAWHRYCRKKLEEALYEKEKRLQAAIVSDGTTSLSLGAALY
ASRFAGNMMRILRRNATRKARLQERVPARLLQKPAEPNFFAEDS
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccgggaggagagatatgtgaggtttcaggactggaaatcagagcaatctgtt
tctgttacttcagatagggtaaactcagaaagagggcataccatctttggtttgttaaag
gacacaactgcaggagccttttcattcctggggaactcttcacattctgaagctctaaac
aaatcaggcccagaggaaaagaagtccaaaacaagagttcttgatcctcaagggccattt
ttgcagagatggaacaagatatttgtgatatcatgtctttttgcagtttttgtggaccca
ttgttcttgtatatcccagtaattgatggtggcaagaactgcctgtacttggacaagaag
ttagagaccgtagcaagtatcctgcgctttttcacagacatcttctatttactccatatg
ctatttcagttcagaacaggctttattgctccctcttctagagtgttcggtcggggtgtc
ttggtcaaggacacatttgcaatagcaaagcgatatatatcaacactgttcctggtggat
ttcttagcagttctgcccctccctcaggtttttgtgttggtggtgctgcctactctccaa
ggtcctgaagttatgaaggcaaaaattgtactactggttattattatttgtcagtatgtg
cctcgactgctccgaataataccactttaccttcaaatcacgagatctgctggcatactt
acagagacagcatgggctggtgctgctttcaaccttataatttatatgcttgccagtcat
ggctttggagctctttggtacattctttccatacagcgagaagacacctgttggagacaa
gcatgtaacaatcagactagctgtgagcttacatctttatactgtgggtatcatccactt
gcaaataattctttcttacaaagtgcatgcccaacaaatagcacttccaattccaatcca
gacccgatatttggaatctttctaccagctctccaaaatgtttcacaatcaacaagtttc
tttgaaaaactattctattgcttttggtggggcctacagaatctaagttcccttggccag
aacatgaaaacaagcactaatacgttggagaatctgtttgctgtttttgtctcgacatcg
ggtttggttctatttgcactacttattggtaatgtgcagacctatttacagtcagcttct
gtgcgtatagaagaaatgagagtgaaaaggcgtgatacagagcagtggatggcacatagg
ttactccctgagaatctcaaggatcggattatgcaccatgaacaatataggtggcaagaa
acaagaggggttgacgaagagggccttcttaaaaatcttcccaaggatcttagaagagaa
ataaagagacatctttgtttgtcgcttctcatgaaggttccaatgtttgaaaacatggat
gaacaactgttggatgccatgtgtgatcgtctgaagcctatgctgtacacagaaggaagc
tgcatcattcgggaaggtgacccagtgaatgaaatgctcttcatcatgagaggaacacta
gagagtaccacaacaaatggtggacaaactgggttcttcaactctaatgttctaaaaggt
ggagacttctgtggtgaagagctcctcacatgggcccttgaccccacttcagcttcaaat
cttcctggctcaactaggacagtgaagacgttgtctgaagttgaagcttttgctctgagg
gctgatgacttgaagtttgttgccacacaattcaggaggctccacagcaaacaactccaa
cataccttccgattttactcacagcaatggaggacctgggctgcttgcttcatacaggca
gcttggcacagatactgcagaaagaagctggaagaggctttatatgagaaggagaagagg
ttacaagcagcaattgtaagtgatggcactacttcgctcagtcttggtgcagcgctctat
gcttcacgttttgctggcaacatgatgcggatcttacggagaaacgccaccagaaaggcc
cgtttgcaggaaagagtacctgcaagactgttacaaaagccagcagaacccaacttcttc
gctgaagatagctga
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