Sorghum bicolor (sorghum): 8059671
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Entry
8059671 CDS
T01086
Name
(RefSeq) pentatricopeptide repeat-containing protein At5g04810, chloroplastic
Organism
sbi
Sorghum bicolor (sorghum)
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Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
PPR_3
PPR_1
PPR_long
TPR_19
Clathrin
Motif
Other DBs
NCBI-GeneID:
8059671
NCBI-ProteinID:
XP_002452434
UniProt:
A0A921R5X7
C5XXB5
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Position
4:56181212..56186197
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AA seq
682 aa
AA seq
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MRALLSLSRLARRVPASLAPVSAPTTFLLRHIHADVPPPPPPPPPHDSPLFVSRILESEP
SLTPNAESEPASDPILDEFLARFVAAFRPRLTAAFPNHDRDVLDEMLRLVADAVLCRLTG
ADRGPDAIELNDDLWAVVWEVSASVREAMRRDQVRADLRQYLHCDEVKEMTRFAVDVGIR
GAMLRELRFKWAREKLDEVEFYRGLDDKRSDAEAAADPAPAPVPRLTALPKRKGEVKFTM
YGLDMSDPKWAEVAERVAEAEAHFVPEEAKAVEGRAKKAEERLLLVDPRRGDPVPAIEEW
KEDLRPKRVDWIALLERIKARNVELYLKVAEILLDQESFEANIRDYSKLIDLHAKANHVE
SAERVLGKMKEKGIAPDVITSIVLVHMYSKAGNLEQAKEAFEFIRREGFKPDLKLFSSMI
NCYINHGEPEEAENLIKSMRGTRVIVKPTREIYTDIVRAYAQRGMMTCAQRVLNMMTHDE
IKPTEELYAICIEAYGRIGDPIQARAMFDQIRRRLGHEPGDSSIAGVVAAHIEKNQLDEA
LQWLLSLEKEGVELGVKTNLVLLDWLSMLQLVLEAEQLVQKIKKLGEEPIEVHVFLAGMY
AKSRQEEKARRSLKILEEKKKLLKSDQFERVIRGLLDGGFSEEANKYYKMMKSCGFEPSE
TIEVGVKASLRIRGASRHIGRH
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgagagccctcctctccctctcccgtcttgcccgacgggttccagcttctctcgcccct
gtaagcgcgccgacaacattcctcctccggcacatccatgccgacgtccctccgccgccg
ccgccaccgccacctcatgactcgccgctcttcgtctcccgcatcctcgaatcggagccg
agcctgaccccgaacgccgagtcggagccggcatccgatccgatcctcgacgagtttctc
gcgcgattcgtggctgccttccgcccgcgactcacggctgccttccccaaccatgaccgt
gacgtgctcgacgaaatgctccgcctcgtcgcggacgccgtgctgtgccgcctcactggg
gccgaccgggggcccgatgctatcgagctcaatgacgacctctgggcggtcgtatgggag
gtcagcgcctccgtgcgcgaggctatgcgccgggatcaggtccgcgccgacctccgccaa
taccttcactgcgacgaggttaaggagatgacgcggttcgctgtcgatgtcggcatccgc
ggtgccatgctccgggagctccgcttcaagtgggcccgcgagaagctcgatgaggtcgag
ttctatcgaggccttgatgacaagcgctccgatgctgaggccgccgctgacccggcgcct
gcgcctgtgccgaggctgaccgctttgccgaagaggaagggagaggtgaagttcacgatg
tacggactggacatgtctgacccaaagtgggctgaggtggcggagcgagtggcggaggct
gaggcgcattttgtgcctgaggaggccaaggctgtagaagggagggcgaagaaggccgag
gagcggctgctgttggttgacccgaggagaggagatccggtgcctgccattgaggagtgg
aaggaggatctccggccaaaacgtgttgattggatagcactgcttgagcggattaaggca
cggaatgtcgagttgtacctcaaggttgctgaaattctgctagatcaagaatcttttgag
gcaaacatccgagattactcaaaattaattgatcttcacgctaaagcaaatcatgtggaa
agcgcagagagagtacttggtaaaatgaaagagaagggtattgcacctgatgtcatcaca
tccatcgtattagtccacatgtatagcaaggcaggcaatctagagcaggccaaggaggct
tttgaatttattcgaagggagggttttaaaccagatctgaaactcttcagttcaatgatt
aattgctatatcaaccatggagaaccagaagaagcagaaaatctgataaaatctatgagg
ggcacacgtgtcattgtcaaacccactagagaaatctacacagacattgtacgagcatat
gctcagcgaggcatgatgacatgtgcacagagggttcttaatatgatgacacatgatgaa
atcaagcctacagaggaactctatgcaatatgtatagaagcatatggacgtattggtgat
cctattcaagcccgtgccatgtttgatcaaatcaggaggaggcttggacacgaaccaggt
gacagttcaattgctggtgtggtggctgcgcacatcgagaagaaccaactagacgaggct
ttgcagtggttgctgagtttagagaaggaaggagttgaacttggtgtcaagacgaacctc
gtgttactggattggctgtctatgttgcagctagttctggaggctgaacagcttgtgcag
aagataaagaagcttggagaagagcccatagaagtccatgtgttccttgccggtatgtat
gcaaagtctcgccaggaagagaaagcccgcaggtccctcaagatcttggaagagaagaag
aaactattgaagtctgatcagtttgagagggttataagaggccttcttgatggtgggttc
tcagaagaggcaaataaatactacaaaatgatgaaatcctgtggttttgaaccatcagaa
acaatcgaggtcggtgttaaggctagtctcaggattaggggtgcttctcgtcacattggc
aggcattga
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