Sorghum bicolor (sorghum): 8059696
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Entry
8059696 CDS
T01086
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 36b
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
8059696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbi03009
]
8059696
Ribosome biogenesis [BR:
sbi03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
8059696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
PCMT
Methyltransf_31
Methyltr_RsmB-F
Motif
Other DBs
NCBI-GeneID:
8059696
NCBI-ProteinID:
XP_002453060
UniProt:
C5XW06
LinkDB
All DBs
Position
4:67852923..67855921
Genome browser
AA seq
307 aa
AA seq
DB search
MRPPARGGRGGRGGRFDGGGRGGGGGRGFGGGRGGGGGRGGRGGRTPRGGRGGGGRGGRG
GGMKGGSKAVVVPHKHAGVFISKSKEDALCTKNMVPGESVYAEKRVSVQNEDGTKVEYRV
WNPFRSKLAAAVLGGVDNIWIAPGTRVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRS
GRDLVNMAKKRTNVIPIIEDARHPARYRMLVGMVDVIFSDVAQPDQARILALNASYFLKN
GGHFVISIKANCIDSTLPAEAVFAAEVEKLKADQFKPAEQVTLEPYERDHACVVGGYRMP
KKQKATS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaggccaccggctagaggcggacgcggcgggaggggaggcaggttcgatggcggcggt
cgtgggggcggcggtggccgggggtttggtggtggtagaggcggtggcggaggcaggggc
gggagaggtggaaggacgccgaggggtggccgcggtggcggtggccggggcggccgtggt
ggtggcatgaagggagggagcaaggccgtcgttgtgccgcacaagcacgccggtgtcttc
atctccaagtccaaggaggatgcgctctgcaccaagaacatggtcccgggagagtctgtc
tacgcagagaagcgtgtctctgttcagaatgaggatggaacaaaggttgaatacagggtt
tggaaccccttccgttccaagttggctgctgctgtgcttggtggtgttgacaacatctgg
attgctcctggtactcgtgtcctatatcttggtgctgcttctggcacaactgtttctcac
gtgtctgatatcgtaggaccggatggactggtctatgctgttgagttctctcacaggagt
ggaagagaccttgtcaacatggcaaagaagaggaccaatgttatccccattattgaggat
gccaggcacccggcaaggtaccggatgctggttggcatggttgatgttatcttctctgat
gttgcacagccagaccaggctaggatcttagcccttaatgcttcatactttttgaagaat
ggaggccactttgtcatttcaatcaaggcgaactgtattgactccaccctgcccgcggag
gccgtgtttgctgctgaagtggagaagctcaaggcagatcagttcaagcctgctgagcag
gttaccttggagccctacgagcgtgaccatgcctgtgttgtgggtggttacaggatgccc
aagaagcagaaggctacctcttag
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