Sorghum bicolor (sorghum): 8060309
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Entry
8060309 CDS
T01086
Name
(RefSeq) polygalacturonase At1g48100
Organism
sbi
Sorghum bicolor (sorghum)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
NosD
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
8060309
NCBI-ProteinID:
XP_002455500
UniProt:
C5XI35
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All DBs
Position
3:14045882..14048328
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AA seq
506 aa
AA seq
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MEFTARTRTAIALLLSLAAFSSFLCGGVQGGRHHHHHAKHTKHNSARPPSAHAPGPASGG
RRHASPPPHARRPVSPPAPPPSSSGGYPTPGAAAPEPAPAPAAAGSVYDVVKDFGAVGDG
VTDDTDAVKTAWDTACQDDGDSVVLAAAGYSFLVHSTVFTGPCQGSVTIQLDGTIVAPSD
PDKWPANSKRNWLLFYQAHGMSLKGAGLIDGKGQKWWELPCKSQKGHGGSSGHGAACDSP
VAMRFFMTNNVTLQGLKVQNSPEFHIRFDSCRGVVASGLSISSPALSPNTDGIHVENSQD
VVITNTAVSNGDDCVSIGAGTLNMHVENVTCGPGGHGISIGSLGKQGSRACVANVTVRNA
VIRHSDNGVRIKTWQGGSGAVSAVSFENVRMDAVRNPIIIDQYYCLSKSCENATSAVFVN
GVSYAGIRGTYDARTPPIHFGCSDAVPCTNITLSDVELLPASGETIDDPFCWNVYGSAAT
PTVPPVPCLMEGVPRNVEDNSSLKCY
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggagttcaccgccaggaccaggaccgccattgctctgcttctttcgctcgccgccttc
tccagcttcctctgcggcggcgtgcagggcggccgccaccaccaccaccacgccaagcac
accaagcacaactccgcgcgcccgccgtccgcgcacgctccgggcccggcgagcggcggg
aggcggcacgcgtctcctcctccgcacgcgcggcggcccgtgtctcccccggccccgccg
ccgtcgtcgtcgggcggctacccgacgcctggcgccgccgcgccggagccagcaccggca
cccgcggccgccggctccgtgtacgacgtcgtcaaggacttcggcgccgtcggggacggc
gtgacggacgacaccgacgccgtcaagaccgcgtgggacaccgcgtgccaggacgacggc
gacagcgtcgtgctcgccgccgccggctactcgttcctcgtgcactccaccgtcttcacc
ggcccgtgccaggggagcgtcacgattcagctcgacgggacgatcgtggcgccgagcgac
cccgacaagtggccggccaacagcaagcgcaactggctgctgttctaccaggcgcacggc
atgtcgctgaagggcgccggcctcatcgacggcaagggacagaagtggtgggagctcccc
tgcaagtctcagaagggccatggcggatcaagcggccacggtgcagcctgtgacagccca
gtggcgatgaggtttttcatgaccaacaacgtgacgctgcaaggcctcaaggtgcagaac
agccccgagttccacatccggttcgacagctgccgcggcgtggtcgccagcggcctgtcc
atcagctcgccggcgctgagccccaacacggacggcatccacgtggagaacagtcaggac
gtcgtcatcaccaacaccgccgtctccaacggcgacgactgcgtctccatcggcgccggc
accctcaacatgcacgtcgagaacgtcacctgcggccccggcggccacggcatcagcatt
gggagcctgggcaagcagggttcgcgggcgtgcgtggccaacgtgaccgtgcgcaacgcc
gtgatccgccactcggacaacggcgtccggatcaagacgtggcagggcggctccggcgcc
gtctccgccgtgtccttcgagaacgtgcgcatggacgccgtccgcaaccccatcatcatc
gaccagtactactgcctctccaagagctgcgagaacgccacctccgccgtcttcgtcaat
ggcgtctcctacgccggcatccggggcacctacgacgcgcgcacaccgcccatccacttc
ggctgcagcgacgccgtaccgtgcacaaacatcacgctctccgacgtcgagctgctcccg
gcgtccggcgagaccatcgacgaccctttctgctggaacgtgtacggcagcgccgccacg
cccacggtgccgccggtgccgtgcctcatggaaggcgtgcccaggaacgtcgaggataac
agcagcctcaaatgctactag
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