Sorghum bicolor (sorghum): 8060584
Help
Entry
8060584 CDS
T01086
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
8060584
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbi01002
]
8060584
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8060584
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
8060584
Peptidases and inhibitors [BR:
sbi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
8060584
Ubiquitin system [BR:
sbi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
8060584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-UBP
Rubredoxin_2
Motif
Other DBs
NCBI-GeneID:
8060584
NCBI-ProteinID:
XP_021321404
LinkDB
All DBs
Position
7:complement(62098167..62105351)
Genome browser
AA seq
1026 aa
AA seq
DB search
MGKTPPKEEAEGSPRNKAPRVDDAAPTTGSVASAPSPTGKTPPKGEEAEGSPRKKAPRLD
DAALALARGASKPNPTGKSPTKEEAEGSPPKRSRSPRSKSPRRQDKRPLAALPVPTVPES
SELIVEGAGRCKCNHVMTDSAIEELSAIEELFPVFKSNDAWTCYGCWDEDKKGIVKVRPE
KRDLLICVTCYDHLCCGVGSIAYPFGHSRAHALKKKHWFAVLYCDPERGYCFKCNAEVPK
PVKFGAGDNKVGHQEIRDIVSPELLAPPASVGQTKAEVNPKKVKMTGKVQAESCPSVVGV
DHANKLPRYESRSSDAQGYAIRGIPNRGNTCYMSAVLQCLFVLGKLRERMLALDRPKSRL
AKVLKKLFLEASAAGDLLNPNEVLECVRKDCAPQFGVGAMEDSHDLLTALRELWNQGEEN
DSWQNDAPTVMDSIFGFVMARTLSCKKCGHLSPPVPYPFQDLSLGFPSNGHPTKSAALSQ
TNESPRSRNREIVVQLFPADVQRNLEKIQTVPASGYSDVIGSEVAVEETQKPLEVGEFMI
APALIKIMLDSADSTKVQRISQRKDVQSPLLIQEGKSVDSLTADSVSIQDLLLLFSEDHQ
VAWRCPNCTIDHEESSASQSKNGEQTVGSGNEDKTVVRDQIEQSDRTACHGKESECHGGI
LPAEKQTDLLGTVKQSEQARTAYLLKDSKNVETDDVGDSSMIYRFTMLPPVLTLHLKRSR
HDTVGSKISGHVRFMEYLDVEQFMDPSFVDEGSTCYRLAGVVEHIGKDTLRSGHYIAYVR
ARRLGNQQEGSSCSSSWFRANDHCIGQVTLEQVLNSEAYILFYERVEDQDISGMPEVAED
IENCWEMIQSDEIVNCNTNLKDRCYELKLEDNSWSARLIHNKYNKYVVNIFENNRSNVER
LQKGCKWLGQFGPLLDYILPIPVCTLAANASLRISKARKAAELMGQVFEKLQSVVPPTEH
VTALVVSNEMEVRDAVERWNNSGRSKLYFMVLDYGLDNDQARAVKELLQELDAMELLFDL
KFCDSD
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggggaagacgcctccgaaggaggaggccgagggaagcccccggaataaagctccgcgg
gtggacgacgcggctccgactacgggttctgtggcgtcggcaccgagtccgacggggaag
acgccgccgaagggggaggaggcggagggaagtccgcggaagaaagctccgcggctggac
gacgcggctctggctctggctcgtggggcgtcgaagccgaacccgacggggaagtcgcca
acgaaggaggaggcggaggggagcccgccgaagagatctcgaagcccgcggagtaaatct
ccgcggcggcaggacaaacggccattggcggctctgcctgtgcctacggttcctgagtca
tcagagctgatcgtggaaggggcggggcggtgcaagtgcaatcatgtcatgactgacagt
gctattgaggaattgagtgctatcgaggaattgtttccagtcttcaagtccaatgacgca
tggacttgctatggttgttgggacgaagacaagaaggggatcgtgaaagtcaggcccgag
aagcgagatctcttgatctgcgtgacatgctacgaccatctctgctgcggggttgggtca
attgcttacccgtttgggcactctcgagcacacgccctgaagaagaagcactggtttgct
gttctgtactgtgatccagaaagaggatactgcttcaagtgtaacgctgaggtgccaaag
ccggtcaaattcggggcaggtgacaacaaggttggtcatcaagagatccgcgatattgtc
agtccagagttactagctcccccggcatctgttggtcaaactaaggcggaggtcaatcca
aagaaggtgaaaatgacaggcaaagttcaggctgaaagctgtccatctgtggttggtgtg
gatcatgcaaacaaattgcctaggtatgagtccagatcatctgatgcgcaaggctatgct
atcagagggataccaaatcgcggaaacacatgctacatgagtgcagtattgcagtgccta
tttgtgcttggtaagctgcgagaaaggatgttagcattggatcgtccaaaaagtcgcctt
gccaaggtactcaagaagctttttctggaggcaagtgctgcaggagacttgctgaaccca
aatgaagttttggaatgtgtacgcaaggactgtgcgccgcaattcggagttggggctatg
gaagacagccacgatttgcttacggccttgcgcgagctttggaatcaaggtgaggagaat
gatagctggcaaaatgatgctcctacagtgatggattccatttttgggtttgtgatggct
cggacgctatcctgcaaaaaatgtggtcatttgtctcctccggttccctatcctttccag
gacctgtcattgggtttcccatcaaacgggcatccaaccaaaagtgctgcattatcacaa
acaaatgagagtcccagatctcgaaacagggagattgttgttcaattatttccagcagat
gtgcagagaaacttggaaaagatacaaacagttcctgcaagtggttattctgatgttatt
ggttcagaggtggctgtggaggaaacacagaagcctttggaagttggtgagtttatgatt
gctcctgcacttattaaaattatgcttgattctgcagattctactaaagtgcaacgtatc
agtcaaaggaaggatgttcagagtcctttgctgattcaggagggcaagtctgttgattca
ctgacagcagattctgtatcgattcaagacttgttgttgcttttttctgaagatcatcag
gtagcttggcgctgtccaaattgtaccatagatcatgaggagtcaagtgccagtcaaagt
aaaaatggtgagcagacggtgggaagcggcaatgaagacaaaacagttgttcgggaccag
attgaacaatcagacaggacagcatgccacggtaaagaatctgaatgtcatggaggtatt
cttccagctgaaaaacagactgacctgttgggaacggtgaagcaatcagagcaggctcgt
acagcatacctattgaaagacagcaaaaatgtggagacagatgatgttggagatagtagt
atgatttatcgttttaccatgcttccacctgtattaactcttcaccttaagagatcccgc
catgacactgttgggagcaaaataagtggccatgtgagatttatggagtaccttgatgta
gagcagttcatggaccccagctttgttgacgaaggtagcacctgctatcgtctagctggt
gttgtagagcacattggcaaggataccttgaggtcaggacactacattgcctacgttaga
gcaagaaggcttggaaatcagcaagagggtagcagctgctcttcctcatggtttcgtgca
aacgaccattgcattggacaagtcactcttgaacaagttctcaacagtgaggcctatatt
cttttctatgagagggtggaagaccaagacatttctggcatgccagaggtggctgaggat
attgagaattgttgggaaatgatacaatctgatgagattgtgaactgcaacacaaattta
aaagacagatgctatgaactaaagttagaggacaattcatggagtgctagactcatacac
aacaagtacaacaagtatgttgtgaatatatttgaaaacaataggagcaatgttgagagg
ttacaaaaaggatgtaaatggcttgggcaatttggtccgttgcttgattatatattacct
ataccggtgtgcactctcgctgccaatgcatcattgcgtattagtaaggctagaaaggca
gctgaacttatgggccaagtatttgagaaactgcaatctgttgtacctcccacagaacat
gtgacagctcttgttgtgtccaacgaaatggaagtaagagatgcagttgaaagatggaat
aactccggacgatctaagttgtacttcatggtgttagattatgggctggacaatgatcaa
gcccgcgcagtgaaggagctattgcaggaactagatgctatggagttactctttgacctc
aagttttgtgattctgactag
DBGET
integrated database retrieval system
