Sorghum bicolor (sorghum): 8060701
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Entry
8060701 CDS
T01086
Name
(RefSeq) probable polyribonucleotide nucleotidyltransferase 1, chloroplastic
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
8060701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8060701
03016 Transfer RNA biogenesis [BR:
sbi03016
]
8060701
Enzymes [BR:
sbi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
8060701
Messenger RNA biogenesis [BR:
sbi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
8060701
Transfer RNA biogenesis [BR:
sbi03016
]
Prokaryotic type
tRNA degradation factors
8060701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
Motif
Other DBs
NCBI-GeneID:
8060701
NCBI-ProteinID:
XP_021308339
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All DBs
Position
2:complement(4314755..4325396)
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AA seq
885 aa
AA seq
DB search
MLACPAALHLLLPAPPPPSHQHQHHHVAFPAPPLHASLPCSRRARRRAPRPRHGVARASA
AVAEEASSSGPAKFSVRIPVGDREILVETGHIGRQASASVMVTDGETILYCSVCLADTPN
DPADFFPLSVHYQERLSAAGRTSGGFFKREGKTKDHEVLVCRLIDRPLRPTMPKGFYYET
QILSWVFSYDGIHSPDCLAITAAGIAVALSEIPNKQTIAGVRIGLIDDQFVVNPTTEQME
NSELDLMMAGTDSAILMIEGYCDFLTEEKLLEAVEAGQVAIREICKAIDVLVQSCGKKKM
VDAISLPPPELYRHVEDISGDELVKALQIKGKIPRRKALSALEDKVISILSEQGYVSKDA
SSGVTESLADIVEDEDEDEIIVDGEVDEGDVHIKPVSRKPPPQLFAEVDVKLVFKEVSSK
YLRRRIVEGGRRSDGRSPWELRPINSQCGLLPRAHGSALFTRGETQSLAVVTLGGYQMAQ
RIDNLVDTEDSKSFYLQYSFPPSCVGEVGRIGAPSRREIGHGMLAERALEPILPPEEDFP
YTIRVESTITESNGSSSMASVCGGCLALQDAGVPIKFPVAGIAMGLVLDTQEFGGDGSPL
ILSDITGAEDASGDMDLKIAGNESGISAFQMDIKVVGITLPVMEQALFQARDGRQHILNE
MSKSSPPPSKALSPYAPLIHVMKVKPNKVNLIIGSGGKTIKSIIEETGVDAIDTGDDGTV
KITARDLSSLEKSKTIIANLTMVPKVGEIYRNCEIKSIAPYGAFVEIAPGREGLCHISEL
SSGWLAKAEDAFKVGDRIDVKLIEINDKGQLRLSSRALLPDADSESNSGSTKEKAPQKDD
AIKMTSRRPRRKRQSEPFGAENATIKTLEKSAAAPAGSKGSEVGK
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcgtgccccgccgcgctccacctcctcctcccggcgccgccgccgccgtcgcac
cagcaccagcaccaccacgtcgccttccccgcgccgccgctccacgcctcgctcccgtgc
tcgcgccgcgcgcggaggagagcgcccaggccaaggcatggcgtcgccagggcctccgcc
gcagtggcggaggaggccagtagctccggaccggccaagttctccgtgaggatccccgtt
ggcgaccgcgagatattggtggaaacgggccacattgggaggcaagcgagcgcttctgta
atggtcaccgacggtgaaacgattctctactgttctgtctgtctggcggatactccaaac
gaccctgctgactttttccctttatcggttcactatcaagagcgcctttcagctgctgga
agaactagtggtggtttcttcaaacgagaaggcaagacaaaagaccatgaggttttggtt
tgcagattgatagacaggcccctacgacctactatgcctaagggtttctactatgaaact
caaattctatcctgggtcttcagttatgatggcattcactccccggactgcttggctatc
acagctgctggtatagccgtggccctctctgaaattccaaataaacaaacaattgctgga
gtaagaattggcctgattgacgaccagtttgttgttaatccaactactgaacagatggag
aactcagagttagatttgatgatggctgggactgatagtgccattttgatgattgagggc
tactgtgattttctgactgaggagaagctgcttgaagctgtggaagctgggcaggtggca
attagagaaatctgcaaagcaattgatgttctcgtccagagttgtgggaagaagaaaatg
gtcgatgctatcagcctaccgcctcctgaactctacaggcatgttgaagatatttctgga
gatgagttggtgaaggcattacaaataaaaggaaagattcccagaagaaaagctctttca
gcattggaggacaaagttataagtatactttctgaacagggttatgtttccaaagatgcc
tcatctggagtcactgaaagtttggctgatattgttgaggatgaggatgaggatgaaatt
atagttgatggagaagtagatgaaggtgatgttcacatcaagccggtttcaaggaagccc
cctcctcagctatttgcagaagttgatgtcaagctagtcttcaaggaagtttcatctaaa
tatttacgaaggcggattgtagagggagggaggcgaagtgatggacggagtccttgggaa
cttcgacccattaattctcagtgtggtttacttccaagagctcatggtagtgctctgttc
acgaggggagaaacacagtcactggctgtggtcactttaggtggctatcagatggcacaa
cgaattgacaaccttgttgatacagaggattcaaaaagcttctatcttcagtactcattt
cctccatcatgtgttggcgaagttggtcgaattggagcacctagccggagagagattggg
catgggatgcttgcagaaagggcactggagccaattttacctccagaagaggattttccg
tacactattcgtgtcgagagtactatcactgaaagtaatggttcgtccagcatggcttct
gtttgtggaggttgtttagcacttcaagatgctggggttcctataaagtttcctgttgct
ggaattgcaatgggcctggtccttgatacacaggaatttggtggagatggtagcccactt
atactttctgatattactggagctgaagatgcctctggtgacatggatttgaagattgct
ggtaatgaaagtggcatatctgcatttcagatggacattaaggtagtcgggataactcta
cctgtgatggagcaagcactctttcaagctagggacgggagacagcatattctgaatgaa
atgtcaaaatcttcacctccaccatcaaaagcactatctccgtatgctcccttaattcat
gttatgaaggtcaaacctaacaaggtgaatttaataattggttctggtggaaagacaata
aaaagcataattgaggagactggagtagatgctattgatactggagacgatggcacggta
aaaattactgcaagagacctatcaagcttagagaagtcaaaaactataatagctaacctt
accatggttccaaaagtcggagaaatatacaggaattgtgagatcaagtcaatagctcca
tatggtgcttttgttgaaattgctccagggcgtgagggtttatgtcatatcagcgagtta
agttcaggctggttggccaaggctgaggatgcttttaaagttggagatcgcatagacgtc
aagcttattgagataaatgataaaggtcaactacggttaagttcccgagctttgcttcct
gacgcggattcagaatccaacagcggttcaacaaaagaaaaggcaccgcaaaaagatgat
gccatcaagatgacatcgaggagacccaggcgcaagagacagtctgagccatttggagct
gaaaatgccacaataaagactcttgagaaaagtgctgcggctccagctggttcaaagggc
agtgaagttgggaagtag
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