Sorghum bicolor (sorghum): 8061137
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Entry
8061137 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC8061137
Organism
sbi
Sorghum bicolor (sorghum)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOV_C
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
8061137
NCBI-ProteinID:
XP_021306975
LinkDB
All DBs
Position
1:3711220..3724424
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AA seq
2773 aa
AA seq
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MSRRDHHQWPRPTHGYDPRAAAAAQFYGGASMPFPDPAAAALHGMNPYGFAPNPFFNSFL
FQNPAALAAYQLQQQQAQAQAQHFASHAYQQAPTGNANHRPTKPAAADKPAPPGSQPQPQ
PQPPPPVGNQHAVLDRAQEAARKAREELVKGGEGVTAWKVAQAVLVALKADSWDSLGVQP
QDVPLLRDLFLIEGKVNAFIHCYVAARKIVTVYDLEVEICKNEGVVQFEELGLGPFLQHP
LVAHYFLVPDDLSVVPKLSSEEVINVLLKFVDKSKKKITIVDFLNHLAEKKSVSGKEKLG
VRVQSLGLHISLIQQAKQTETSAAKLLGNMSGSGNSSREKDLLKNASFRTHKKALDKRFI
SLTNRIKQLPGINKHIHFDSTDDETNGDTSSEDGKSDDNENKNEYSVLDKKDGDKRVNSC
PYPSKTEELERLGLKSEINKRPSLENSKPKESRKKGKVSEKRKFEEIRSPSCSCKQPKKQ
QKLQKHEASPNCFLSIGKLENFVTTWKETCREHPVQQVLEMLANYYGRTPTEKKGIINFC
SQYPGIGLLNVAVKSMGCGLLDSIYDVIQLASENNVSSSPLPNTTTEVMEIEPPSKENTG
CTDGAHKKSEDNRTGHSVAIDDVIRRITEYIESNSKVSGDVTMQVRALNDCETWVTTQFS
ANQFSALGHGTFLEFLDKHCHQFRTALSSFLKEGTCNPSSLEVSVLQQQIEFLLYQAESN
WLEDGGFSEDSFVMLLKRQFPTISFNIVQDKSGEGVPGFIEGQKKDIQTNSLKFSISLLE
KRWSGTLPSRHGNVDELGKSVAEQSYYCGTVCSREAINCLLRAPMLSDLLLWSHWDSLFA
PTLGSFVHWLMNTGPIQELACIATTDGRFIRVDSSATVDQFLEAIIQRSPFQVAVKLLSL
LYVYNGSTSTPMSLLKCYAQRAIKLIVDNNNDLMNAKSENKIFMPDEPQNLISESSTCFA
DQCQESSQVSSARLIRSESLPNFDNTVHLIAKFVLDCLGHLPLEFRSLAADILLAGFRVV
TKNWHAVMLHEATENGQLCMLHDIGLSLGVVEWVEDCRRLCLTEEVHVQTEMHSSAKLAS
EGATHENSNGHISSDVNMMGERRQLFPGINDRVGMDNEDNNNKMLNPAGTEADIAELHTS
RSSMMEETNLEEASLVIETIRREEFGLDQALSDTENSLLKKQHARLGRALHCLSQELYSQ
DSHLLLELVQNADDNTYPKDVEPTLAFVLQENGIAVLNNERGFSAENIRALCDIGNSTKK
GSNQGYIGNKGIGFKSVFRVTDAPEIHSNGFHVKFDITDGQIGFVLPTAVPPYSTTSFSR
MLAVEDDKDAHPLWNTCILLPFRSKFREGTGMCSIVSLFSDLHPSLLLFLHRLKCIKFKN
LFDDTLLIMRREVLGDGIVRISHGIETMSWLVVSKRLQGTIVRHDVCTTEIAVAFTLQQT
EKGDYEPYLKQQPVFAFLPLRNYGLKFIIQGDFVLPSSREEVDADSAWNQWLLSEFPSLF
VCAQESFCALPCFERCPGKAVTAFLSFIPLAGEVHGFFSQLPHLILSKLRVTCCMFLDGS
TVQWVYPCNTLRGWDEQTKMLLSEGLLHEHLGLGYLSKDIIISDNLSRALGIHDYGPNIL
LDTISSICRIDGCIESLGLEWLCAWFVNLYLTLLSHSRNVSSARSLEDALLDKVRKIPCI
PLSDGSFSSVSDGPIWLPYDVVSSIPECRSSIENFPVLYGNLRTVSPNLLSACCKNKYLM
EEVRIDDLADMLQKIGVRKLSGHDIIKNHIMVSLRNGLDANVTDRMIREYVSFIMVHLQS
SCTSCNFEKEGIVSELRKSPIFLTNHGYKSPADEPIHFSKDYGNSVDVSRLLQNVEISWI
ELDSSYLIHHGSESSSFEREKWRRFFEEMGVTDFVQVVKVEKSLSQVDSLLAGGLSLADV
SAKPCTVYDWESPELSRILSIFSSKRCRENCVYLLEVLDRFWDDYYSPKSMILTDATHCG
ENRAVESSFMKCIQSFKWIASRMDEDLHYPTDLFYDSENVRSLFGSVAPYAVPQVSSSSL
KKAIGFKTEVSYCDALMVLKYWITSKVPFRASMSQMCKFYTFLSEGVADSKIDIKREFMS
SPSIFTPLQRPRASEVIPGSFLAPEDLYWHDPTGCFEITEDFIATRNRSMFPRRMLSAAY
PNLCELFTLTCGVPKAPTTSNYVEMLLRLSTIALPSQAANHVFCVFVRWAKYLQSESDKM
NDILYLKESLQKLETTILPTSADKWVSLHPSFGLVCWVDDDELKQQFINSSNVYFIQFGD
LSSEDKQMLYGRVAALMKSLGIQALSKVVYREAIFYGTSENREKVSLICWLLPYMQRYIY
KMHRDTYINFQKNDIMKITNLQVVVVDKLFHKYVLRGLESSSKKRFKCHCLLQGDTLYAT
QDADSHSVFLELSRIFFDGSPDLHFANFLHMIKTMAESGTHAEQIESFIVNNQNVPELPK
HEAVWSFSSLSAVDQGSANQGGADTQGVDFQPVREFSAPNHQKAPGMVSSWPLNHWRTAP
VFRTPLINQHASMQEAKVNDAGLSSNLNMPGMYGHTEDSLLSVDLEGDWIIEEKPRTETT
LLGDISTEIFDEPQMAMSAEPFNAPAYLNLEEAGSSSPTVHVELTNFDEKLANLAEDRNQ
RPSDASQLRTGRLGEALVEKYFAKQLGSNNVRWVNDKIETGLPYDIVITHPEGFTEYVEV
KTTVSSRKDWFDVSPREWQFALEKGDLFSIARVMLGTKKASIEMLKNPHKLYKQKALRLG
LLISRHTISSAAT
NT seq
8322 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcagggatcaccaccagtggcctcggcccacccacggttacgaccctcgcgcc
gccgccgccgcgcaattttatggcggcgcctcgatgccgttccccgaccctgccgcggcg
gcgctgcacgggatgaacccctacggcttcgcccctaaccccttcttcaatagcttcctc
ttccagaaccccgctgccctagctgcctaccaactccagcagcagcaggcgcaggcgcag
gctcaacacttcgcctcccatgcctaccaacaagctcctaccggtaacgccaaccaccgg
ccgaccaaacccgccgccgctgacaaaccagcgccgccgggctcccagccgcagccgcag
ccgcagccgccgccgccagtgggcaaccagcacgccgtgctcgaccgggcgcaagaggcg
gcgaggaaggctcgggaggagctcgtgaagggcggggagggcgtcacggcgtggaaggtg
gcgcaggcggtgctggtggcgctcaaggctgactcatgggactccctcggcgtccagccc
caggatgtgcctctcctgcgggacctcttcctaatcgagggcaaggtgaatgcattcata
cattgctatgttgcagcaagaaaaattgtaacggtttatgatctggaggttgagatatgc
aagaatgagggggttgtgcaatttgaagagctgggtttgggacctttccttcagcaccca
ctagttgcacattattttttagtgccagatgatttgtctgtggtgcctaagctttctagt
gaggaggttatcaatgtcctgctgaaatttgtggacaaatctaagaaaaaaatcacaatt
gtagatttcttgaatcatcttgcagagaaaaaatcagtctctgggaaggaaaaacttggt
gtgcgggtacagagcttggggttgcatatttccttgatacaacaggccaagcaaacagaa
acgtctgctgcaaagcttctaggaaatatgagtggatctggtaatagtagtcgggagaag
gatttgttgaaaaatgcaagtttccgtactcacaagaaggctttggacaagaggttcatt
tctttaactaatcgtataaagcagttaccaggcatcaataagcatatccattttgattca
accgatgatgaaactaatggtgatacgagttctgaggatggtaaatctgatgacaatgag
aataagaatgaatattctgttcttgacaaaaaggatggtgataagcgtgttaatagctgc
ccatatccgtcaaaaactgaagaactggaaaggcttggtttgaaatctgaaattaataaa
aggccatccttagagaatagcaagccaaaagagagcagaaaaaaggggaaagtaagtgaa
aaaagaaaatttgaagaaatcaggagtcctagctgttcgtgcaagcagcctaagaagcag
caaaagttgcaaaagcatgaagcatcaccgaattgtttcctaagtattggtaagctggag
aattttgtaacaacatggaaggaaacatgtcgtgagcatccagttcaacaggttctggaa
atgttagcaaattactatggaagaacaccaacagagaagaagggaataataaatttctgc
tcacagtacccaggcattggccttctcaatgttgctgttaaatcaatgggatgtggtctg
ctggatagcatttatgatgtgatacagcttgctagtgagaataatgtatcatcaagccct
cttccgaacaccaccaccgaggttatggaaatcgagcctccaagtaaagaaaatactggt
tgtactgatggagcccataagaagagtgaagacaacaggactggacacagtgttgctatt
gacgatgtcatcaggaggataacggaatatattgaatctaacagtaaagtctcaggtgat
gtgactatgcaagtgagggcacttaatgattgtgaaacatgggtaactactcaattttca
gcaaatcaattcagtgctcttggccatgggacattccttgagtttttggacaaacattgt
catcagttccgaactgctttgagtagtttcttgaaggagggtacttgtaacccttcatct
ctggaagtttctgtactgcagcagcaaattgaatttttactctatcaagctgagagtaat
tggctggaagatggtgggttttcagaggatagtttcgttatgcttcttaaaaggcaattt
ccaacaataagctttaatatcgtgcaagataaatctggtgaaggagttcctggctttatc
gaggggcagaagaaagacatacaaacaaatagtttaaaattttccatctctttgttggag
aaacggtggtctggaactttgccaagtagacatgggaatgttgatgaactggggaaaagt
gtcgctgagcaatcttattattgtggaacagtttgctcaagagaggcaattaattgttta
ctgagggctcctatgctgtctgatctgcttctttggtcccattgggattcgctatttgct
cctacactgggctcctttgtacattggttgatgaatactggtccaattcaagagcttgca
tgcattgcgaccacagatggtaggtttattagagtagattcatcagccacagttgatcag
tttctggaagctattatccaacgctcaccatttcaagtggcagtgaaactgctttcactg
ctatacgtttacaatggttctacgagcaccccaatgtcattgctaaaatgttatgcacag
cgagcaataaagctcatagtagataacaacaatgatttgatgaatgctaaatctgaaaac
aaaatatttatgcctgacgagccccaaaacctaattagtgaaagctctacttgttttgct
gatcagtgtcaagaaagctctcaggtgtcttctgcaagattgatcaggtctgaaagcttg
ccaaactttgataacactgttcatttgatcgcaaaatttgtacttgattgtcttggccat
ctacctctggaattccgtagtcttgcagcagacatactattggcaggatttcgggttgtt
actaagaactggcatgcagttatgttgcatgaagccactgaaaacgggcagctttgcatg
cttcatgatattggcttgtcacttggagttgtagaatgggttgaagattgccgtaggttg
tgtttaactgaagaagttcatgtgcagacagaaatgcattcttctgccaagcttgcatct
gagggagccacacatgaaaattctaacgggcatatttctagtgatgttaatatgatgggt
gagagaagacaattgtttcctggcataaatgatcgggttggtatggataatgaagacaat
aataataagatgttaaatcctgctggaactgaggcagatattgcagaactacatactagc
agatcttccatgatggaagaaacaaatcttgaggaagcatctcttgttattgagactata
cgtcgtgaagagtttggtctggatcaggcactaagtgacactgagaatagcttgttaaag
aagcagcatgctcgacttggcagagcattgcattgcctttcacaagaactatattcccag
gattctcatctacttcttgagctggtacagaatgctgacgacaatacatatcctaaggat
gttgaaccaacattagcattcgttctccaagagaatggtattgctgttctaaacaatgag
aggggcttctctgctgagaacattagagcactctgtgatattggtaactcgacaaagaaa
ggatcaaaccagggttatattggaaataaaggcattggatttaaatcagttttccgggta
actgatgctccggagatccattcaaatggtttccatgtgaaatttgatatcacagatggc
cagattggttttgtgttgccaactgcagttccaccttacagtaccacttcttttagcaga
atgttagccgttgaagatgacaaggatgcccatccgttgtggaacacttgcattttactt
cccttcagatcaaaatttagggagggcactggtatgtgctccattgtgtctttgttttca
gatctgcacccatctctactgctgttccttcatcgactaaaatgtatcaagtttaagaat
ttgtttgatgacacacttctgattatgagaagggaggttcttggtgatggcattgtgaga
atctcgcatgggattgagacaatgagttggttggtggtcagtaagaggttacaaggtacc
attgtgcggcatgatgtgtgcaccacagagatagctgtggcatttactttgcagcagact
gagaaaggagattatgaaccttacttgaagcagcaacctgtgtttgcttttcttcctcta
aggaattacggtcttaaattcattattcaaggagattttgttttaccatcttccagagag
gaagtggatgcggatagtgcatggaatcagtggttgttgtctgaattcccttctttgttt
gtctgtgcccaagaatccttttgtgctcttccctgttttgagaggtgccctggaaaagct
gtcacagccttcttgagttttattcctctagcaggagaggttcatggattcttcagccag
cttcctcacttgatcctttccaagttgcgtgtgacctgctgcatgtttttggatggctct
actgtgcaatgggtctatccatgcaatacgcttaggggttgggatgaacaaactaaaatg
ctattgtccgaaggcttacttcatgaacatcttggtcttggttacctctcaaaagatatt
attatatctgataatttatcaagggccctaggtattcatgactatggaccaaacattttg
ctagataccatctcatctatttgccgaattgatggttgtattgagtcactgggcctggaa
tggctgtgtgcttggtttgttaacctttatctgacgttgctgtctcattctcgaaatgtt
tcctcagcaagaagccttgaagatgctcttttggataaagttaggaaaataccatgcatc
ccactttcagatggttcatttagctctgtttcagatggtcctatatggttgccatatgat
gttgtcagttccattcctgaatgcagaagtagcattgagaattttcctgttctatatggt
aatcttcgaactgtaagtccaaatcttctctctgcatgctgcaaaaataaatacctcatg
gaggaagtcagaatagatgatctggcagacatgctccaaaagattggggtgcgaaagttg
tctgggcatgacattattaaaaaccacatcatggtgtccttgcgtaacggtttagatgct
aatgtgactgatagaatgattagagagtatgtgagctttattatggttcatcttcagtct
tcttgcaccagctgtaactttgaaaaagaagggatagtgtcagaacttcggaagagtcct
atcttccttacaaaccatggatacaagagcccagctgatgaaccaattcacttcagcaaa
gattatgggaattccgtggatgttagcagactgcttcagaatgtagaaattagttggatt
gaacttgatagtagctatttgattcatcatggttcagagtcgtcatcatttgaacgggaa
aaatggaggcgattttttgaagagatgggtgtgactgattttgtgcaggtagtgaaagtt
gaaaaaagtttatcccaagttgattctcttctggcaggaggcctttctctagctgatgta
tctgcaaaaccctgtaccgtgtatgactgggagtcaccagaattatctagaattttatca
atattttcttcaaaaagatgcagggaaaattgtgtatatcttctggaggttcttgataga
ttctgggatgattattatagtccaaaatctatgatcctcacagatgctacacattgtggt
gaaaacagagcagttgaatcatcgtttatgaagtgcattcaaagcttcaaatggatagca
tcaagaatggatgaggatcttcattatccaacagatttattctatgattctgaaaatgtc
cgctctctttttggtagtgtggctccatatgctgtaccgcaggtatctagcagttcactt
aagaaggccattggattcaaaacagaggtatcctactgtgatgcattgatggtcctgaag
tattggataacgtcaaaggttccctttagggcaagcatgagccagatgtgcaaattctat
acctttttgtcagaaggtgtggcggactcaaagattgacattaaacgggagttcatgtca
tctccctctatatttacaccactacagcgtcctcgggcaagtgaggttattcctggaagt
tttttggcgccagaagacctctattggcatgacccaacaggatgctttgaaataacagag
gatttcattgcaacgagaaacagaagcatgttcccaagaagaatgctatctgcagcctat
ccaaacctttgtgaattatttactctgacatgtggtgtaccaaaggctccaacaacatca
aattatgttgagatgctgctacggctgtcaaccatagcattgccttcacaggcagcaaac
catgtcttttgtgtatttgtgagatgggctaagtatctgcagtctgaaagtgacaagatg
aatgatatattgtacttgaaagaatctcttcagaaattagaaacaacaatattgcccacc
tcagccgataaatgggtctctctacatccttcttttggccttgtttgctgggtagatgat
gatgagttgaagcaacagtttattaactctagtaatgtttacttcatacaatttggtgac
ctttcttctgaggataagcaaatgctgtatggaagagttgctgctttgatgaaaagctta
ggcatccaagcactttcgaaggttgtgtatcgtgaagcaatattttatggtacatcagag
aacagagaaaaggtttccttgatttgttggcttttgccatacatgcaacggtacatctat
aaaatgcatagagatacttatatcaacttccagaaaaacgacatcatgaagattaccaat
ctgcaagtagtagttgttgacaagttatttcacaagtatgtactaaggggacttgagagt
tcttctaagaaaagattcaaatgtcattgccttttgcagggagatacgctatacgcaaca
caagatgctgattcacattcagtatttttggagctttctagaattttctttgatggatcc
cctgatctgcattttgcaaattttctacacatgatcaaaaccatggcagaatctggcacc
catgctgagcaaatagagtcttttatcgttaataatcagaatgttcctgagttacctaaa
catgaagctgtctggtccttctcttccttgtctgcagtcgaccaaggttcagccaaccaa
ggtggtgctgatacccagggggttgatttccaacctgtccgtgaattcagtgctccaaat
catcagaaggcaccaggaatggtttcaagttggcctcttaaccattggagaacagcaccc
gtcttcagaacacctctcataaaccagcatgcaagcatgcaagaggcaaaggtcaatgat
gctggactttcatcaaacttaaacatgcctggtatgtatggacacaccgaagatagtttg
ctttctgttgatcttgaaggggattggattatagaagagaagccaaggaccgaaactaca
ttgcttggagatatttcaacggaaatctttgatgagcctcagatggcgatgtctgctgaa
cctttcaatgcacctgcttatttgaacttggaggaggctggaagttcaagcccaacggtc
catgttgagctaacaaatttcgatgagaaactggctaatcttgcagaagacaggaatcag
cggccatcagatgcaagccagttaagaacagggaggcttggtgaagcactggtcgagaaa
tattttgccaaacagctaggttccaacaatgttaggtgggtgaacgacaaaattgaaacc
ggactgccttatgatattgttataacacacccagagggtttcacagagtatgtggaggtt
aaaacaactgtatcttcaagaaaagattggtttgacgtctcaccaagagaatggcagttt
gccttggagaaaggggatttatttagcattgctcgtgtcatgttaggtacaaagaaagca
agtatagaaatgttaaaaaacccacacaagctttataagcagaaagcattgcggcttggt
ctcctgatatccagacacacaatctcgtcagcagcaacatag
DBGET
integrated database retrieval system
