Sorghum bicolor (sorghum): 8064259
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Entry
8064259 CDS
T01086
Name
(RefSeq) N-glycosylase/DNA lyase OGG1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
8064259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8064259
Enzymes [BR:
sbi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
8064259
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
8064259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
HHH_2
Motif
Other DBs
NCBI-GeneID:
8064259
NCBI-ProteinID:
XP_002453974
UniProt:
C5XU78
LinkDB
All DBs
Position
4:complement(52759100..52765145)
Genome browser
AA seq
413 aa
AA seq
DB search
MRLPLLPRSPPLAAMPPRRRRVVRAPLLTPSPPQPSSTPPPVPSVEAPKPETPDHHDPTP
SARRRLPLAAGAVEAQEEWHPLPLSTADLSLPLTLPTGQTFLWRRTSLSPLRFTGAVGPH
LVSLSHLPDSDDGRLAFLLHNDGSCPASSVPAARAALCDYLNAAVSLADLWRQFAAADER
FAEVSARLGGGGARVLRQDPVECVFQFLCSSNNNIARIEKMVWTLAGYGERLGEVGGFVF
HRFPTIERLARVSEQELREAGFGYRAKYIVGTAKELQAKPGGGEKWLASLREKELSYVIE
ALCTLPGVGPKVAACIALFSLDQNHAIPVDTHVWKVATQYLLPELAGKSLTPKLSVIVAD
AFVTRFGSYAGWAQNVLFIGQLPAQKLVVAQVNSDNGTTKPTKRKRGVQPKPC
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcccgcttcttccacggtctcctcccctcgccgccatgcctcctcgccgccgc
cgcgttgtcagagcgccgctgctcacgccgtctcctccacagccctcctctaccccgccg
ccggtcccgtccgtagaggcccccaaacccgaaacccccgaccaccacgatcccactccc
tccgcccgtcgccgtctccccctcgctgccggggccgttgaggcgcaggaagagtggcat
ccgctcccgctctccacggccgacctttccctcccgctcaccctccccaccggccagacc
ttcctctggcgccgcacctccctctccccgctccgcttcaccggtgccgtggggccccac
ctcgtctccctctcccacctgccggactccgacgatggccgcctcgcattcctcctccac
aacgacggcagttgccccgcctcctcggtgcccgccgcccgcgccgcactctgcgactat
ctcaacgcggccgtctcgctcgccgacctctggcggcagttcgccgccgcagacgagcgc
ttcgctgaggtctccgcgcgtctcgggggcggcggcgcccgggtgctcaggcaggacccc
gtcgagtgcgtcttccagttcctctgctcctccaacaacaacattgcccggatcgagaag
atggtgtggacgctggcaggctacggggagcggctcggcgaggttggtgggttcgtgttc
caccggttccccacgatcgagcggctcgcgcgcgtgtcggagcaggaacttcgtgaggcc
gggttcgggtacagggcaaagtacattgttggcactgctaaagaattgcaggccaaacct
ggtggaggtgaaaaatggcttgcctcactgcgtgagaaggagctttcatatgtgattgaa
gccctttgcactctgccaggtgttggtccaaaggtcgctgcctgcattgctctgttctcc
cttgatcaaaaccatgctattcctgtcgacactcatgtttggaaggttgctacacagtat
ctactaccagagctagctggcaagagcttgaccccaaaacttagtgttattgttgccgat
gcctttgttactagatttggaagctatgctggttgggcacaaaatgttcttttcattggc
cagctaccagcccaaaaacttgtggtggctcaagttaacagtgacaatggtaccacaaaa
cctaccaaaaggaagcgcggggtgcaaccgaaaccatgttga
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