Sorghum bicolor (sorghum): 8064936
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Entry
8064936 CDS
T01086
Name
(RefSeq) protein argonaute 12
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8064936
03036 Chromosome and associated proteins [BR:
sbi03036
]
8064936
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
8064936
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
8064936
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
8064936
microRNA pathway
RISC loading complex
8064936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoMid
ArgoL2
Motif
Other DBs
NCBI-GeneID:
8064936
NCBI-ProteinID:
XP_021319394
LinkDB
All DBs
Position
1:10756622..10763328
Genome browser
AA seq
1097 aa
AA seq
DB search
MSTRDGCGGRRGGHEAAGRGGGGGGGGRGRGGRGAAELGGRGGQGRGRGGAELGGGRGGA
VGAARGGGRGGGEQRGGHQFFHGAHQPVGGGGGRGGGGGHYHHHGGVPAQQGALQGQPRW
QVAAPPPPPPAAAASRPRPAEVEALSGEVERKAAVTAVAEAEAREGPSGTAREPAAAAAR
IEEQQGTSLGAADQGAAAQGRLPPASSKALVFPPRPGYGTLGRRCRVRANHFLVQVADKE
IYHYDIVITPESESRKRNRWIVNELVKLHKQYLDGRLPVYDGRKGLFTAGPLPFKAKEFV
LKLTNPERANQGEKEYRVTIKDAAKIDMHSLRQFLAGRQRELPQDTIQGLDIALRECPSE
KYVSISRSFFSKAFGHGGDIGSGVECWRGYYQSLRATQMGLSLNIDISATAFYKAQPILD
FALEYLNIRDTSRRLSDQDRIKLKKVLKGVRVVATHRRDIAIRYKITGITSLPLNDLTFD
QDGTRVSVVQYFKHQYNYCLKHIHWPCLQAGSDSRPTYLPMEVCNILEGQRYSRKLNERQ
VTSILKMACERPTQREGSILEVVNRNNYGNDHCAKEFGIKVTNELALVDARVLPAPTLKY
HDSGREKVCSPSIGQWNMNNKRLIDGVSIKYWACVTFASRLHPNDVRMFCNNLVGACNDI
GMQINGRPCVDVGQARPDNLEAALRNTHRQSAQILAQQGVTSPQLDLLIVVLPDANASFF
YGRIKRLCETELGIITQCCIPKNVHKGGRQYLQNLALKINVKVGGRNTVLEDALNRRIHL
LTDLPTIIFGADVTHPAPGEDASPSIAAVVASMDWPEVSKYRCLVSSQGHREEIIADLFT
QVKDPQKGLLHGGMIRHAEHINFAVLPINDLSFFFLKSYRCCRELLVSFYRANGSRKPSR
IIFYRDGVSEGQFSQVLLYEVDAIRKACASLEEGYLPPVTFVVVQKRHHTRLFPEDHRAQ
GQTDRSGNILPGTVVDTKICHPSEFDFYLCSHSGIQGTSRPTHYHVLFDENNFTADALQT
LTYKLCYTYARCTRSVSIVPPAYYAHLAAFRARHYLDDGLSDQGSSSVASSRQQDRAAPV
KQLPKVMESVKQFMFYC
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgcgcgacggctgtggcggccggcgtggcggccacgaagcagcaggccgtgga
ggtggcggtggcggtggcggccgagggcggggcggccgtggcgccgcggagctcggtggc
cgtggcggacaagggcggggccggggcggcgcggagcttggtggtggccgaggtggcgcc
gtcggtgcggctcgtggcggcggtcgtggaggcggcgagcagagagggggacaccagttc
ttccacggcgcccaccagccggtcggtggtggtggtgggcgaggcggcggtggcggacat
taccaccaccatggcggcgtgcctgctcagcaaggtgctcttcagggccagccgcgctgg
caagtggccgcgccgccgccgccgccgccggcggcggcggcgtcgaggccgagacctgcg
gaagtcgaggcgctgagcggcgaggtggagaggaaagcggctgtgacggcagtggcagag
gcagaggcgcgcgaggggccgtcgggcaccgcgcgtgagcctgctgccgccgcggcgaga
atcgaggagcagcaagggacgtcgctgggggcggcagaccagggggctgccgctcagggg
aggctgcctccggcgtcgagcaaggcgctggtgttccccccgcggccggggtacggcacg
ctcggccggaggtgccgcgtgcgcgccaaccatttcctcgtccaggtggcggacaaggag
atctaccactacgacatcgtgattactccagaatcagagtcaaggaaaagaaatagatgg
atcgttaacgaactcgttaaactgcacaagcaatacttggatgggcgactgcctgtttat
gatggtaggaagggccttttcactgctggtcctctaccgttcaaagccaaagaatttgtt
ctaaaactaaccaatcctgagagagcaaaccagggtgagaaagagtacagggtgaccata
aaagatgctgcaaaaatagatatgcacagccttaggcagttcttggctggtaggcagagg
gaactgccacaggatactatccaaggccttgatattgctttgagggaatgtccaagtgaa
aagtatgtatccatctcaagatcatttttctcaaaggcatttggacatggtggtgatatt
ggcagtggtgtggaatgctggagggggtactaccaaagtctacgtgctacacaaatggga
ctgtccttgaatattgatatttcagcaactgcattttacaaggctcaaccgattttggac
tttgcattggagtacctcaatatacgtgacacctcaaggcgtttgtctgaccaggatcgc
ataaaattgaagaaagtcctcaaaggagtacgggttgtggcaacacatcgtcgtgatata
gccatacgttacaagattactgggataacctcacttcccttgaatgatttaacgtttgat
caagatgggacaagggtttcagttgttcaatactttaaacaccaatataattactgtttg
aaacacattcactggccatgccttcaagctggcagtgatagcaggccaacttatttaccc
atggaggtttgcaatatacttgaaggacaacgctattctagaaagctaaatgagcgccaa
gtcacaagcatcctgaagatggcatgtgagcgaccaactcaaagggagggtagcatttta
gaggtagttaataggaacaactacggtaatgatcattgtgccaaagaatttggtattaag
gtgacaaatgaacttgccttggttgatgcgcgtgtgctgccagctccgacacttaagtac
catgactctgggcgagaaaaagtgtgtagtccttccattggtcagtggaacatgaacaac
aagagattgatcgatggagtatccattaagtattgggcttgtgtgacttttgcttctcgc
ttgcatccaaatgacgtccggatgttttgcaacaacttggttggggcgtgcaatgatatt
ggcatgcaaataaatggaagaccttgtgttgatgttgggcaagctcgcccagataactta
gaagctgcactcagaaatactcataggcagtctgcacaaatacttgcccaacaaggtgtg
actagcccacagcttgatttactaattgttgtattgccagatgcaaatgcaagtttcttt
tatggaaggataaagcgtctttgtgaaactgaacttggtataataactcagtgttgtata
cctaagaatgttcataaaggtggccgacaatatctccaaaacctggcccttaaaattaat
gttaaggttggtggtcgtaatacagttcttgaagatgctttaaataggaggatacatttg
ttaacagatttgccaacaataatctttggagctgatgttacccacccagctccaggggag
gatgcatccccgtctatcgctgcggttgttgcatcaatggattggccagaagtttcaaag
tacaggtgcttggtgtcttctcaaggtcatagggaagagatcatagctgatcttttcaca
caagtgaaggatccacaaaaaggactacttcatggtggaatgatcaggcatgctgaacat
attaactttgctgttcttccaataaatgatctttcctttttttttttgaagtcatatcgt
tgctgcagggaactacttgtatcattctatagggcaaatgggagccgaaaaccgagcagg
ataattttctatcgagatggtgtcagtgaggggcagtttagccaggtcttgctttatgaa
gtggatgcaattcgaaaggcttgtgccagcttggaagagggctaccttcctccagttaca
tttgttgtggtgcaaaagcggcatcacacacggcttttccctgaagatcatcgtgcacaa
ggacagacagatcgtagtggaaatattttgccaggaactgttgttgacacgaagatatgt
catccaagtgaattcgacttctacctttgtagccactcgggcattcagggaacgagccgt
ccaacacactaccatgttctgtttgacgaaaacaatttcaccgctgatgcactacagaca
ttgacctacaaactgtgctacacgtatgcgcggtgcacgcgatcagtctctatagttccc
ccagcatactacgcgcacctggcggctttccgtgcgcgccactacttggatgatggcctc
tccgaccagggatcgtcttctgtggcgagctctcgccagcaagatcgcgctgctccagtg
aagcagctgccgaaggtgatggagagcgtcaagcagttcatgttctactgctga
DBGET
integrated database retrieval system
