Sorghum bicolor (sorghum): 8066182
Help
Entry
8066182 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC8066182 isoform X2
KO
K15199
general transcription factor 3C polypeptide 1
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8066182
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
8066182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
8066182
NCBI-ProteinID:
XP_002454215
LinkDB
All DBs
Position
4:complement(57429199..57450482)
Genome browser
AA seq
1786 aa
AA seq
DB search
MAGAPRRARCHGPPARPISQARAVGSHPCAPRRQPRGGGRGRGARLCRRPRGDGLRGGRA
AGHAARGERGDQGQLPGVIRAQIREIGVQCRPEGDVGVCCCKQVKDHGAEREDASQNKHV
VNTNSLYLSRYAKDLNMTSQQRIEITKPELLGSNEETNVDVFQEDGTFDVNSKNDISIHD
YLPAMKAICDKLEEASGKALVVSDIKVDLDYRMAYGHRAWRNVLHRLRDAQLVETFDAEV
DDKVVRCLRLLKKFDPNEFQSKCIASNFKFVKKGQATDQILELPLENCIYDMISAQGTKG
ITLVEIGKRLGLNNSKKLHKRVSSMLKKFDLTWEAEVPDKTSQYRIWTSKNFSLYKAGTA
LQTFEALSEDCDDCSDLWSLVPTKGLDTLESPSSHGKLLLLEEENHDEPVGHHIQKDQND
LDASAVVSQLVEEDKVTLGQRRRRRCRPLTSDDQRHRRILHMLKKKKFVLKVELHKWLER
LEKKDGKIMDRKTLTRTLNKLQQEGSCKCIKVSVPLVTNYTRSRLIDVILHSSVGDLSPE
LVDQFRIRQRNFDTQSRAGAAAKVKQNQHMTAIPGLRISRRVKVYKPLLLEAMYANGFIG
AKMIRAKLFHKFLWAYVNSLPSWCNAFSCAKEGHYDKSLNQSCLLFSMEEAMKEMPLELF
LQVVGSAKKIDNMITCCRLQKTLSEIPTEEYNQLMDTHAYGRLSRLVNILDKLKLVQFAK
EFLEDAGVPSNAMSTHLMELRPYIEEPIPKILPSSQLNNHRKIRHDFVLSKQEFVDSYWE
TLECCYSTAGLADPLSAFPGSSVPEVSHPRSWSTLRVMTTEQRLELQQRIMNVSEKGKIP
FKDCVRIARELNLSVEQVLRLSYERQSRLREQPSVTAKQKQQRVSSGLTPKRRKRRADGT
SLKLLKRKVQASGSAEQILGQPTLDEDVPETMSSSSIDHANKSDQPVSRTDGASTYQADE
DKETSPMISRYAILRKSCMRSKRFFWTYESDRKLLMIYIRVRAILGARCYRVAWSSLSDL
PAPPDTCRRRMAVLLKTNEKIRGAVMCICNLLGKRYARYLEMERRLKRRRLLPQISESSH
ENSLDSDCEQFNWDDFEVPEIKSALNEVLELIQTEKVDQTKRIGPMNKKNINNDNDVTKD
TICSQELPNNQAIRGETKMSSVSESGLCDLEKSCGHSNAESENMDICCKPQEKIIKDHRN
RIIERGIWKSLAVANALELLKLVFLSKSLGSNVQASLAATLQLYSESEIFTAVSFLKEKR
FLVTGSGGKPYTLSSQFLTNACCSPFPFGSGKKASAFSNWLIAQQKNTTDNGVYLYPDIQ
CGELVHLFSLVLSGNLLISPFLPSEGVGEADEPNSSGPLVVDTSDLGDNSQKRKADTVKL
KSGKAKKQKPLPKIESDFCYRREKGFPAIQIGLNLHRTQTSNFSQESHGKESSIFISSWA
MSTKNVDLHAEWHIMPSFSNCLSSYRHLLSESQLENSYSGWPWDAMKKYAEELHSVFEQR
SELFTLSPELFRNAFCIIHQAGGQGVTLRELSQALHPLAMQLVLIIVDTLKRFQLAVKVN
AYDGVQIVDSLHSAKYHITTLAECDNCCCTDPSTSQVADNENTKNLLEEKYTRPVNFAGP
IKMFGDGHTVTVINVQSKLSSPHIYSKDPGDEERLSTPGENNKESSCYHNCERHCYQPIL
PWINGDGSTNSTLYEGLSRRVIGYVMHYPGLMEEDVIRRMDVLNPQTCRTLLEKLTLDGY
LHVRVFEEPVPMAPTILQGLLKQHSSKEPSKCVKRYFANPMSTLQL
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgctccgcggcgcgctcgatgccacgggcctcccgctaggcccatcagtcaa
gcgcgcgctgtgggctcgcatccttgcgctccgcgtcgtcagcctcgtggagggggccgg
ggacggggtgcccgtctctgccggcgaccccgcggagacggacttcgaggaggccgagcg
gcggggcatgcggctcgtggcgagcgcggcgatcagggacaacttcctggggttatacga
gcgcagattcgcgaaatcggagttcagtgccgtccagaaggcgacgttggagtgtgttgc
tgcaagcaggtgaaggaccacggagctgagagggaagatgcctcacagaataaacatgtt
gtcaataccaattcactatatctctcccgatatgccaaggacttgaacatgacttcacag
caaagaattgagattacaaagcctgaactacttgggagcaatgaagagaccaatgtagat
gttttccaagaagatggaacttttgatgttaactccaagaatgatatatctattcatgat
tatcttccagcaatgaaagccatatgtgataaacttgaagaagcaagcggaaaggctctt
gttgtctcagatataaaagtcgatctcgactacaggatggcatatgggcacagagcatgg
agaaatgtattgcataggctaagagatgcacaacttgttgagacatttgatgctgaagtt
gatgataaggttgtccgctgtttgcgtctgctgaaaaaatttgatccaaatgagtttcag
tcaaaatgtatagcctcaaattttaaatttgtcaaaaaaggtcaggcaactgatcaaatt
ttggaacttccattagagaactgtatatatgatatgatcagtgcccaagggacaaaaggt
attacacttgttgagattggcaaacgtcttggactcaacaattcaaaaaaacttcataaa
cgagtatcatccatgctaaaaaaattcgacctaacatgggaagcagaagttccagacaag
acatcacagtaccgaatttggacttcaaaaaacttctcactctacaaagctggtactgct
ctgcaaacttttgaggcactatcagaagactgtgatgattgttcggatttgtggtcccta
gttccaactaaaggtttggatactttggaatcacctagttcacatggaaaactactcttg
cttgaagaagagaaccatgacgaaccagttggacatcatatccagaaggaccagaacgac
cttgatgcttctgctgtagtttctcagttagttgaagaagataaagttactttgggtcag
aggaggaggcgtcggtgccgtccattaacttctgatgatcaacgccatagaaggattcta
cacatgttaaagaagaagaaatttgtactgaaggtggagttacataaatggttagaacgt
cttgaaaagaaggatggaaaaataatggataggaagacattgactcgcacgttgaataag
cttcagcaagagggaagctgtaaatgtatcaaagtcagtgttcccttggtcacaaactat
actcgcagtcgtctcattgatgtaatactgcattcttctgttggagacttgtcaccagaa
cttgtggaccaatttaggatcagacaaaggaactttgacactcaatctcgcgcaggtgca
gcagctaaagtgaagcaaaatcaacatatgactgccatacctggcctgaggatttcacgc
agggttaaagtttacaaaccattactattagaagctatgtatgcaaatggattcataggt
gcaaagatgattcgagcaaagttattccataaatttctgtgggcttatgtcaattctttg
ccaagttggtgcaatgcctttagttgcgccaaagaagggcattatgataagagccttaat
caatcatgcctgttattttctatggaagaagccatgaaagaaatgccccttgaactcttt
ctacaagtagttgggtcagcaaagaagattgataacatgataacttgttgtaggcttcaa
aaaacactttcagaaatacctaccgaggaatacaatcagctcatggatactcatgcctat
ggtcgactctcacgtttagtaaatattttggacaagctcaagctggttcagtttgcaaaa
gaattcttagaagatgctggtgtgccgtcaaatgccatgtctacacatttgatggagctc
aggccttacatcgaagaacctataccaaaaattcttccatcttcccaactgaacaatcat
cggaaaattcggcatgattttgtactttcaaagcaagagtttgttgattcatattgggaa
acactagagtgctgttattcaacagctggcttggctgacccgttgagtgccttccctggc
agttctgtccctgaggtttctcatcctcgttcatggagtacacttagagtcatgactact
gaacaacgtctggaattgcaacagcgtattatgaatgtcagtgagaaggggaaaattcct
tttaaggactgtgttagaatagcaagagaattgaatctctctgtagagcaggtacttcgc
ctttcatatgaaaggcaatctcggctccgtgaacagcccagcgttactgctaaacaaaag
cagcaaagggttagttctggattgactcctaagagaagaaagagacgtgctgatgggacc
agcctgaagcttcttaaacgtaaagtacaagcaagtggatctgctgaacaaatattgggg
caacctactcttgatgaagatgtaccagagacaatgtcttcatcatccattgaccatgca
aacaaaagtgatcagcccgtgtccagaactgacggcgcttccacatatcaggcagatgaa
gataaggaaaccagtccaatgatcagtcgatatgctatcttaagaaagagctgcatgaga
agtaaaagattcttttggacatatgaatctgatagaaaactgctgatgatatacattaga
gtgcgtgcaatacttggagcaagatgttatcgtgtagcttggagctctctctctgatctt
ccagctccaccagatacatgtcgcagaaggatggcagtactattgaaaacaaacgaaaag
ataagaggagctgtcatgtgtatatgtaaccttcttgggaaacggtatgctagatatctt
gaaatggaaaggagattgaaaaggagaagattgcttccccagatttccgaaagtagtcac
gaaaacagtttggattcagattgtgagcaattcaattgggatgactttgaagttccagag
ataaagagtgcacttaatgaagtccttgaattaattcaaacagaaaaagtagatcagacc
aagagaattgggcctatgaataaaaagaacattaataatgataatgatgtcacaaaggac
acaatatgttcacaggaactgccgaataatcaggctatacgaggtgaaaccaaaatgagt
tcagtttcagaaagcggtctctgcgatcttgaaaaatcatgcggacattcaaatgcagaa
agtgaaaacatggatatctgctgcaaaccccaagaaaagatcattaaggatcacagaaat
aggattattgaaagaggtatatggaaatcattggctgttgcaaatgcattggagcttctg
aagttggttttcctcagcaaatcattaggatcaaacgtacaagcttcacttgcggctaca
ctgcagctttattcagagagcgagatttttactgctgtttcctttcttaaagaaaaaaga
ttcttggttactgggagtggtgggaagccgtacactctttcttcacaattcttaaccaat
gcttgttgttcaccttttccatttggttcaggaaaaaaggcttctgcattctctaattgg
cttatagctcagcaaaagaatactacagacaatggagtttatttgtatccagacatacaa
tgtggagaacttgttcatctattctctctggttttgtcaggaaaccttctcatttcacct
ttcttgcctagtgaaggagttggtgaggctgatgagcctaacagctctggtcctttggtc
gtagataccagtgatttaggtgacaacagccagaagcgcaaggctgatacggtgaaactg
aaaagtggcaaggctaagaaacagaagcctttgccaaagatagaaagtgacttttgctac
cgccgggagaaaggattccctgctatccaaataggtctaaatcttcatagaactcaaaca
agcaatttctcacaagagtcacatggtaaagaatcctctatttttatttcaagctgggca
atgagcacaaagaatgttgatttgcatgcagaatggcacatcatgccatcgttttcaaat
tgcttaagttcatataggcatttattgtctgaatctcagttggagaactcttatagtgga
tggccttgggatgctatgaaaaaatatgcagaagagttgcattcagtatttgagcagcga
agtgaattgttcacattgtctcctgaactgttcaggaatgcattttgtattattcatcaa
gctggtgggcaaggggttactttgagagaactgtcacaggcactgcatccattagccatg
cagttggtcttaataattgttgacactctcaagagatttcagctggctgttaaggtcaat
gcatatgatggtgttcagattgtggactcattacattcggcaaagtatcatataactaca
cttgcagaatgtgataattgctgctgtacagatccttcaacttctcaagttgctgataat
gaaaacacaaaaaatctactggaagagaagtataccaggcctgttaattttgctggtcct
ataaaaatgtttggtgatgggcacacagtgacagtaattaatgttcagagcaaattgagc
tcacctcatatttacagcaaagatcctggggatgaggaaaggctatctactccaggagag
aacaataaggagagtagttgctatcataattgtgaaaggcactgttatcagcctatatta
ccatggataaatggcgatggtagcactaatagcactctctatgaaggtttgagtcgccga
gttattggttatgtcatgcactatcctggactaatggaggaagatgttatccgtcggatg
gatgtattgaatcctcagacttgcaggaccctgctagaaaagctaacgcttgatgggtac
cttcatgttcgggtgtttgaagaacctgtgccaatggctccgaccatactgcagggtttg
ttgaagcaacactctagtaaagaaccatcaaaatgtgtgaagcgctacttcgcaaaccca
atgagcacattacaactgtaa
DBGET
integrated database retrieval system
