Sorghum bicolor (sorghum): 8066790
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Entry
8066790 CDS
T01086
Name
(RefSeq) peroxisome biogenesis protein 6
KO
K13339
peroxin-6
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
8066790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8066790
Membrane trafficking [BR:
sbi04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
8066790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_5
AAA_lid_3
RuvB_N
AAA_22
nSTAND3
RNA_helicase
AAA_17
AAA_7
AAA_28
AAA_18
AAA_14
Rad17
TsaE
DUF815
ATPase_2
AAA_25
Cytidylate_kin
AAA_33
Parvo_NS1
AAA_2
AAA_24
Mg_chelatase
TIP49
AAA_6
Sigma54_activat
IstB_IS21
AAA_11
PhoH
ATPase
AAA_3
Motif
Other DBs
NCBI-GeneID:
8066790
NCBI-ProteinID:
XP_002448537
UniProt:
A0A921QVT1
C5YG31
LinkDB
All DBs
Position
6:complement(56456300..56462021)
Genome browser
AA seq
928 aa
AA seq
DB search
MVEMRQRRKPLVLASTQALLDSLPGDRPPPPPLEPVCLRTGVLRFPSGPGAGAEFGELAS
FVALPASALRRLTVVTGTPVLVKNTDNNVGRIVKAVLFDDMSLRKSHSEYTDQVVSASPS
DRAMGFLPCRMFPATGLASMDEVVAYVSPLLAFNLGLHVSCLKLLIQRGGQPFKFCSRAE
EIDATAGAGSDLSLHLDLLPCPQVPKYALHLRVSVVRIPDCGVLASLKINSSFGGSDYQD
MVDQALNEYFKFDRFLARGDVFCIQNSWNCGSSCCLACNKQDNKLHPRNMIYFKVTGMEP
SDEPILRVNCNETALVLGGAASAAIPPYSFFAASGNSVPLQSEIVEHLASIIAPALCPSD
ILPKIKFSTFLYGPSGCGKRTVVRHVANHLGLHVVECSCHDLMTSSESGAPAALATAFKE
AQKYSPCIILLRHFDAIGNASSNEGPQSEQSGIASSIESIIKQYTGQCWVAKDSLPGKDV
NGSSYLVEPGCVSSLQIILVATADSSEGMQQSIRRCFRHEIDMKTMNEEQRNKLISEMLQ
GIPKVADESIGDKFVKDLAAQTSGFMPRDILALVADAGVSFAHKIAAGKDSKGISKHEIL
PESSSATQNEEKHFCKEDIMSSMERAKKRNRAALGTPKVPNVKWEDVGGLEEVKKVILDT
IQLPLMYKHLFSSKLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYVG
ESEKNVRDIFEKARSARPCVIFFDELDSLAPARGSSADSGGVMDRVVSQLLVEIDGLSDN
SQDLFIIGATNRPDLLDSALLRPGRFDKLLYVGVNTDASYRERILKAQTRKYKLHKNVSL
LSVAQRCPPNFTGADIYALCADAWFHAAKRSVKTFEIDPSRSNDASAEEVIVEIDDFITV
LGDIAPSLSLEELQNYEQLRQKIEGPSR
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggtggagatgcggcagcggaggaagccgctggtgctcgcctccacgcaggcgctcctc
gactcgctcccgggggaccgcccgccgccgccgccgttggagccggtgtgccttaggacc
ggcgtcctccgcttcccctccggccccggcgccggcgccgagttcggggagctcgcgtcc
ttcgtcgccctccctgcctccgcgctccgacggctcacggtcgtcaccggcacgccggtg
cttgtcaagaatactgacaataatgttgggaggattgtcaaagcagtattgtttgatgac
atgtcccttcgcaagtcccactcagaatatactgatcaagtggtctctgcttctccttct
gatcgtgcaatgggcttcttaccttgtcgcatgttccctgctactggtttggcatccatg
gatgaagttgttgcttatgtcagcccacttttggcattcaacttggggttgcatgtttct
tgcctcaagcttcttattcaaagaggagggcagcctttcaagttctgttctcgagctgaa
gagattgatgcaactgctggtgctggaagtgatctttctcttcacttagaccttcttcca
tgccctcaagtgcctaaatatgcgttgcatttacgagtttctgttgtgaggattcctgat
tgtggtgtgcttgcttctttaaagataaattcatcctttggaggaagtgactaccaagac
atggtagatcaagctttgaacgagtactttaagtttgataggttcctagcaagaggagat
gttttttgtatacaaaacagttggaactgtggctcaagctgctgcctggcatgcaataag
caggataataaactgcatccccgtaatatgatctactttaaggtgactggcatggaacca
tcagatgaacctatacttcgtgttaattgcaatgaaacagcccttgtgcttggtggagct
gcttctgccgcaatccccccttattccttctttgctgcttctggtaattcagtacctttg
caaagtgaaatagtggagcatttagcatctatcattgcgccagcattgtgcccttcggat
attttaccaaaaatcaagttttctacttttttatatggcccgtcaggatgcggaaagcgc
acagtggttcggcatgttgctaaccatcttggtctgcatgtggtcgagtgtagctgtcac
gatctaatgacgtcatcagaaagtggggcacctgctgcacttgcaactgccttcaaagaa
gctcagaagtattctccttgtataatacttcttcgccactttgatgcaattgggaatgca
tcctccaacgaaggtccacagtctgagcaatctgggattgcatcgagcattgaatctatc
attaagcagtacactggacaatgttgggttgctaaggattcactgccagggaaagatgta
aatgggagctcataccttgtggagcctggatgtgtgagctcccttcaaattatactagtt
gcaactgcagacagttctgaaggaatgcaacagtcaattagaagatgcttccgccatgag
atcgacatgaagactatgaatgaagaacagagaaacaaattgatatctgagatgcttcaa
ggcattcctaaagttgctgatgagagtattggtgacaagtttgtaaaagatttagcagcg
caaacgtcaggtttcatgcccagggacatacttgcactggtcgcagatgctggtgtgtct
tttgcgcataaaattgcagcagggaaagatagcaaaggaatcagtaagcatgagatcctt
ccagaaagctcttctgccactcaaaatgaggaaaaacatttctgcaaagaagatattatg
tcttccatggaacgagccaagaaaaggaatcgtgctgcgctaggcacacccaaagttcct
aatgtcaaatgggaggatgttggtgggctagaggaagtgaaaaaggttattctagatact
attcagttgcctctgatgtacaagcacctgttttcttctaaattgcgcaagcgatcaggt
gtcctgctatatggacctccaggaacagggaagaccttactcgcgaaagcagtagcaact
gaatgctcattgaactttcttagcgtgaaaggtccagaactgataaacatgtatgttgga
gaatcagagaagaatgttcgggatatttttgaaaaggctagatctgcacgcccatgtgtc
attttctttgatgagcttgattcccttgcccctgcacgaggatcctcagcagattctggc
ggtgttatggacagggttgtttcccagttacttgtggagatcgatgggttgagtgataac
agccaggaccttttcattattggggctaccaataggcctgaccttcttgattctgccctt
cttcgccctggtcggtttgacaagctcctttatgtcggcgtaaatactgatgcatcatac
agggaaaggatccttaaagcacagacgcgcaagtataagcttcacaagaatgtttctctt
ttgtcagttgctcagcgttgtccaccaaactttactggtgctgatatttatgcgctgtgt
gcggatgcatggtttcacgcagcaaagcgatcagttaagacatttgaaattgatccttca
agaagtaatgatgccagtgctgaggaagtcattgtcgagatcgatgattttattacagtg
ttaggagacatcgcaccatcactatctctggaggagctacaaaactacgaacagttgagg
cagaagattgaaggaccttctagatga
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