Sorghum bicolor (sorghum): 8066852
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Entry
8066852 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC8066852
Organism
sbi
Sorghum bicolor (sorghum)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
RT_RNaseH_2
RT_RNaseH
Retrotrans_gag
Integrase_H2C2
RVP_2
Asp_protease_2
gag-asp_proteas
rve
Ty3_capsid
Asp_protease
zf-H2C2
Chromo
Motif
Other DBs
NCBI-GeneID:
8066852
NCBI-ProteinID:
XP_002448587
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All DBs
Position
6:complement(57299794..57306060)
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AA seq
1357 aa
AA seq
DB search
MAEPTLADLLKEIKTMSAEISALKTDIASIKEKASTDESSENRRPEGHREQDFHPKHKKW
DFPHFDGTTDPMLFLNKCEAYFRQHRTMAEERVRMASYHLDDAAQLWFIQLQDDEGTPMW
VNFKDLLNLRFGPPLRSAPMFELAECRRTRTVEEYANRFQALLPRAGRLDEAQRVQLFTG
GLRPPLSSTVRLHNPDSLAAAISLARQVELMELEHPAPVPSRAPPRGLSAPAARAALPPP
PPLLALPAPPAAAQQGHAEGNQRRLTPEEMAERRRQGLCFNYNEKFSRGHNRFCKRLFFL
EGMEIDDAQAEETDAAADAVAQEAPIFSLHAVVGVSVGRTMQVRVRVGSTPLIALLDTGS
THNFIAETAAARSGLPIQSQPRLTAMVANGEKVPCLGVIKHAPIAIHDSVFAVDLFVMPL
AGHDLVLGTQWMATLGRLVWDFVDGSVTFQHQGSTVRWPGVAPTSTLETCATTSSAPLLD
ALLAEFVDIFAEPHGMPPQRARDHAINLKAGAQPVAVRPYRYPAAHKDELEKQCATMLQQ
GIIRRSDSAFSSPVLLVKKADGGWRFCIDYRALNALTVKDAFPIPMVDELLDELHGARFF
TKLDLRSGYHQVRMLPADVHKTAFRTHNGLYEFLVMPFGLCNAPATFQALMNDVLRPFLR
RFVLVFFDDILIYSETWADHLRHLRAVFFELRRHRLFIKRSKCAFGEATVAYLGHVISAE
GVAMDPTKGFQKVQAIRDWPVPRSVRALRGFLGLAGYYRKFVLNYGAVAAPLTALLKKDG
FTWTDAAAYAFDALKAAVTSAPVLAMPDFAKPFTVECDASTHGFGAVLIQDGHPIAFFTR
PVAPRHRALAAYERELIGLVHAVRHWRPYLWGRRFVVKTDHYSFKYLLDQRLLTIPQHHW
VGKLLGFDFSVEYKPDVTNTVADALSRRDTEEETAGAVLALSAPRFDFITRLRQANAGDP
AMVALREDISSGARSMPWSVVDGMVQYSGHLYIPPGSPLLQELVLAVHEDGREGVQRTLH
RLRRDFHFPNMKHVVQELIRVCVVCQRYKSEHLQPAGLLLPLPVPQGIWTDIALDFVEAL
PRVRGKPVILTVVDRFSKYCHFVPLAHPYTAESAAEAFFADIVCLHGVPQSMVSDRDPVF
TSAFWRELMRLTGTKLQMTTAFHPQSDGQSEAANRAQAVQKRFYDAGHRPVTYEVGDWAL
LRLRQRAASSLQQRTKGKLKPRFYGPYQVVELINEVAVRLALPPNARLHDVFHVGLLKKF
QGPPPTAPPPLPQVHHGAIAPEPERAVRYRLARGIRQVLIKWKGESAASSTWEDVDTFLV
KHPTFQLEDELNLDGGGDVRRARERVEREPGRDALGE
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccaaccctcgccgatctcctcaaggagatcaagaccatgtcggccgagatc
tcagcgctgaagaccgacatcgcctccatcaaagagaaggcctcgacggacgaaagcagc
gagaaccgccgccctgaaggacaccgcgagcaagatttccacccgaagcataagaagtgg
gactttccccacttcgacggcacgaccgacccgatgctattcctcaacaaatgcgaggcc
tacttccgccaacatcgcaccatggcagaagagcgcgtgcgcatggcgtcctaccatctg
gacgacgctgcgcagctgtggttcatccaactacaagacgatgagggcacgccaatgtgg
gttaacttcaaggatctcctcaatttgcggttcggccctccactccgttccgccccaatg
tttgagctcgcggagtgccgccgcacaagaaccgtggaggagtatgctaaccggttccag
gccctcctacctcgcgccggcagactcgacgaagcgcagcgggtgcagctctttactggc
gggctccgaccaccgctaagcagcaccgtccgcctccacaacccggactccctcgccgcc
gccatcagcttggctcgccaggttgagttgatggagctggagcatccggcgcctgttcca
tcaagggcgcccccgcgcggcctgtcggcgcctgcggccagggccgccctgccaccgccg
ccgccgctcttggccctaccagcgccgcccgcggctgcacaacagggccacgccgagggc
aaccagcgccgtctgacacccgaggagatggccgagcgccgacgccaagggttgtgcttc
aactacaatgagaagttctcccgcggccacaaccgattctgtaagcgtctgttcttcctc
gaaggcatggagattgacgacgcccaggcggaagagaccgatgcagccgcagacgcagtg
gcgcaggaggcgccgatattttctctgcacgccgttgttggcgtgtctgtgggcaggacc
atgcaggtccgtgtccgagtgggctcaactccactcattgccctgctcgacacaggcagc
acccacaacttcattgccgagacagcagcagcgcggtctggccttcccatccagtcccaa
ccgcgcctcactgccatggtggccaatggcgagaaggtgccgtgcctaggcgtcatcaag
catgccccaattgcgatccacgactccgttttcgccgtcgacctctttgttatgcccctt
gcaggccacgacttggtgctggggacgcagtggatggccacgctgggccgcctggtgtgg
gacttcgtagatggctccgtcaccttccagcatcagggcagcaccgtccgttggcccggg
gtggcgcccacgagtacactggagacctgcgccacgacgtccagcgcgcccctcctcgat
gcactactggcggagttcgtcgacatcttcgccgagccccacggcatgcctccccagcgc
gcccgcgatcacgccatcaacctcaaggccggcgcacagccagtagcggtccggccctac
cggtaccctgctgcccacaaggacgaattggagaagcaatgcgcgaccatgttgcaacaa
ggcattattcggcgcagcgactccgctttctcgtccccggtgcttctcgtcaagaaggcg
gacggcgggtggcgtttctgcatcgactacagggccttgaacgccctcaccgtcaaggac
gccttcccgatccctatggtcgacgagttgctggacgagctgcatggcgcccgcttcttc
accaagctcgacttgcgatccggatatcaccaagtacgcatgctgcccgccgacgtccac
aagacggcgttccggacccacaatggactctatgagttcctcgtcatgccgttcggtctc
tgcaatgctccggccacattccaggcgttgatgaacgatgttctccggccgttcctccga
cggttcgtgcttgtcttttttgacgacatccttatttacagtgagacgtgggccgatcac
cttcgccacctgcgtgctgtcttcttcgagctgcggcgccatcggcttttcatcaaacgc
agcaagtgtgcgttcggcgaggccacggtagcctacctgggccatgtgatttcagcggag
ggcgtcgcgatggacccgacgaagggctttcagaaggtgcaggccattcgcgactggcct
gtgcctcggtcggtccgcgcactgcgcggcttcctcggccttgccggctactaccgcaaa
ttcgtcctcaactacggcgcggtcgccgccccactcaccgccctactcaagaaggacggt
ttcacctggaccgacgccgcggcctacgccttcgacgctctcaaggccgcggtcacctcg
gcccccgtcctcgccatgccggacttcgccaagccgtttacagtggagtgtgacgcatcg
acccatggctttggagctgttctgatccaggatgggcatcccattgcgtttttcaccaga
ccggtcgcaccacgccaccgtgccctcgccgcctacgaacgggagctcatcggcctcgtc
cacgcagtacgtcactggcggccgtacctgtgggggcgtcgtttcgttgtgaagaccgac
cactacagcttcaaatatctgctcgaccagaggctcttgacgatcccgcaacaccattgg
gtgggcaagctcctcgggttcgatttctccgtcgagtacaaaccggatgtgacaaacacg
gtcgccgacgcgctgtcccgccgtgatacagaagaggagacagcaggcgcggtgctggca
ctctcggctccccgttttgacttcatcacacggcttcgccaggccaatgcgggagacccg
gccatggtcgctcttcgggaagacatcagcagtggcgcccgcagcatgccctggtccgtg
gtggacggcatggtgcagtacagcggccacctgtacattcccccaggctcgccgttgctg
caggaacttgtgctggcagtgcacgaggacggacgtgagggtgtccaacgcactttacac
cgcctccgccgcgacttccattttcctaacatgaaacatgttgtgcaggagcttattcga
gtctgcgttgtctgccaacggtataaatcagagcacctgcaacccgccgggctcctgctg
cccctcccggtgccgcaaggcatttggacggacatcgccctggacttcgtcgaggctcta
ccccgcgtccgtggcaagccggtaatcctgacggtggtcgatcgtttcagcaagtactgc
cactttgtcccattggcacacccgtacactgcggagtccgccgccgaagcgttcttcgcc
gacattgtttgcctccacggcgttccccagtccatggtgtctgaccgtgacccagttttc
acctcggcgttctggcgtgaactcatgcgcttgacaggcaccaaactgcagatgacaacg
gccttccaccctcagtcggacggccaatctgaagctgctaaccgagcccaggcggtccag
aagcgcttctacgacgctggtcatcgtccagtgacctatgaggtgggcgactgggccctt
ctgcgccttcgccagcgtgcggcctcctccctgcagcagcgaacgaagggcaagcttaag
ccgcgcttctatgggccctaccaagtcgtggagctcatcaacgaggtcgctgttcgcctc
gccctgccgcccaacgcgcgccttcacgatgtttttcatgtcggcctgctcaagaagttc
caagggccacctccgacagcacctccgcctctaccgcaggtgcaccatggcgccattgca
cctgaaccagagcgcgcggtgcgctatcgcctggccagaggcatccgtcaggtgctgatc
aagtggaaaggcgagtctgcagcctcgtccacatgggaagacgtcgacacattcctcgtc
aagcaccctaccttccagctcgaggacgagctgaacctcgacggggggggggacgttcgt
cgcgcgcgtgaacgcgtggagcgcgagcctgggcgtgatgccctaggtgaataa
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