Sorghum bicolor (sorghum): 8068086
Help
Entry
8068086 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC8068086 isoform X1
Organism
sbi
Sorghum bicolor (sorghum)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3H1
NRDE-2
zinc-ribbon_6
Motif
Other DBs
NCBI-GeneID:
8068086
NCBI-ProteinID:
XP_021301388
LinkDB
All DBs
Position
8:55948258..55956734
Genome browser
AA seq
1679 aa
AA seq
DB search
MTGPKPAPAASQNPSAAPPRPPPPPPPPPPPPVTAVARAREEGELSSGADDDETLQTRLG
ATSILGKFVEAGSQVPSATLLGKGSNTLIVSNALNHKVSAPSYKKIMRANQGQFKPGTNR
NLSWQKPVSSDNLVITFSDDDGETDSGKTRQGKVRKASSQGTQRTGNSMQTRIMREEVSQ
QKTLGTKVGPAHLPAFPFTHRNVGAGRGSGNTFVRKEPPVRQVNPLKSKQKIQNGVGVHS
EDDRLEILRHKIAARENELKGQKRPLSAVATKNTELSSNQPRLPSEKIGLEASNSGEYSR
FNSLSEHNGGPNKRLKLNQQNSNSQFRSDLVTFAPIGSTSGKNNVQSSEVTNQFENGISM
NLNVNETDTTATTEHSDQIQQGGATKSLHHHKDAGGAGNHAMLELHDGLAAQPPFTDTQT
VPEDTSALAPVTSAQARQQVLPVGTPPVLDGMPQLQPGKENAVCLNCSVQIGVDTRNTTL
FSLLEMEELQDKELEDAQEHRQKCEAEEREALRAYRKAQRALLEANERCAILRRKREICS
SQVHGLIAENSSLVQSLSFRNPEDGLAMPSLLNSQIHADSQMPENQGGRHRLSEEHSEQP
VDKHEARPHYHDKLAASTADPSSVTAANADSVLSDYMEDDLLFPTRQARSECTLDLENQM
EETIHVYSEENRQVSGDSAQDYELLEASLRSRLVERFGKKSCLNVTIDEGTEELALGKVA
AGHGKQSMYVGHQLQEAEQNIMTTTPEGTMELENDGAEKTGGLSNSSSGPSMGNCDPEDN
ISSLKELCMPLAMDTLIFPSSAPLNAARQIKRALPGICKDPSDYKNDYLTSDAASEVTES
VQDMMHDLVGENMKILPTTQKDNNMVHSVIDPFWPFCMFELRGKCNDEECQWQHVEHHAW
RKPKLKKHSMTSVSGQIPYGLSQHILPVPVYLVGSNLIKADLNLTQSVLASSLWQYWQRG
FCASFPLPLSVQRVLPSDAPFLQAGDGWIADFDRNRQLLKFRMLDSRKNKIVQGPVDIEL
FLEAALDLYCGKGNKPERIKALSFLARSIEADPSTVILWVFYLHIYYQKDEGLGKDDMFF
HAVQHNFCSYELWLMYINSRLRVDDRLDTYNDALSMLCQMTADSDKDLQERSAFILDIFL
QMIYFLCMSGNVEKAISRIIGILPTAMPDNCGDKLLADVISSLTMSDRCIFWISCLYISI
YRNLPEEIIDQLEFQKALPRALKWPSIDPSVANRDKIIELLNYAAYKMAEDISECVKNGD
PSYLMLSQFLTVNHISCLAAVEGFKSSADMLVTYMKEYPMCPQILLISARLDRKHGTCPG
LKSFDELILNWPKEAQGIQYMWNQYVEHVLATDTELAEKVLTCWFDEHGKDCDIQTNSAI
CIELSSEEPGTSSLVSPQEVGSGPSTSEDLIFRLLNLSLYKILENNLQEAQIAVDKALKL
AHGEWYEHCIREHAAIHALELEKSSSSTDAQTQATFSLIIGYLADNRNLPTRELLSRRFC
QNVKKHRLRQLIDDTIGSVPADSSLINSALEVCFGPSLLPKRIGDVKYLVDFVETVMEAL
PANYRLGLAVGGFVAKHFSGSDATSTGTRFWASSVLINAIFRAVPVAPESVWLEGADLLQ
KLHVTEIVKRFYQQAASVYPFSFKLWHAHLNYCKASGSNTESIVENARQRGIELNPTPT
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atgacgggccccaaacccgcgcccgccgcctcgcagaaccctagcgcggccccgcctcgc
cctcctcctcctcctccgcctccgccgccgccgccggtgacggcggttgcgagggcgcgc
gaggaaggcgagctctcctccggcgccgacgacgacgagactctgcaaactcggctaggt
gctacatccattcttgggaagtttgtggaggctggatctcaagtgccatcggcaactctc
cttggtaaaggcagtaacaccttgattgtctcgaatgctctgaatcataaagtgtctgct
ccaagttacaagaagatcatgagggcgaatcaggggcaattcaaaccgggtactaatcgg
aatctttcatggcagaagcctgtgtcaagtgataaccttgtgataactttctcagatgat
gatggcgagacagactctggaaagacaagacaaggtaaagttaggaaggccagctctcaa
ggtacacagagaacagggaacagtatgcaaactaggatcatgagagaggaagtatctcag
cagaaaacccttggtacaaaagtaggtcctgcacacttgcctgcttttccattcacacac
agaaatgtaggggctggcaggggatcaggtaatacctttgtcaggaaagagccacctgtc
cgccaagttaatcctctgaagtctaaacagaaaattcaaaatggggtaggagtacattct
gaagatgataggttagaaatcttgcgccataaaatagctgctagagaaaatgaactaaaa
ggtcaaaaaagacctttgtccgctgttgctacaaagaatacagaattgtcttccaatcag
ccaaggctgccatcagaaaagatagggcttgaagcttccaacagtggtgaatattcacgc
tttaatagtctgtctgaacataatggaggaccaaataaaaggttgaagctcaatcagcag
aattcgaacagccaatttcgcagtgacctggtaacattcgcacctattggttctacatca
gggaaaaacaatgtgcaatcttcagaagtgacaaatcagtttgaaaatggaatttctatg
aaccttaatgtcaatgaaacagataccacagccacaacagaacattcagatcaaatacaa
caaggtggggcaactaagagccttcatcaccacaaagatgctggaggtgctggtaaccat
gctatgcttgagttgcacgatgggcttgcagcacaaccaccatttactgacacacaaact
gtaccagaagatactagtgctttggcgcctgtcacgtctgcccaagctaggcaacaggta
ctgcctgttggtactccacctgtgttagatggaatgccacaattgcaacctggaaaggag
aacgccgtatgtttgaactgcagtgtccagataggcgtagacacacggaacacaacattg
ttctctctacttgagatggaagaactacaagacaaggaattggaggatgctcaggagcat
agacaaaaatgtgaagctgaagaaagagaagctcttagagcttatcgcaaagcacaaaga
gctttactcgaggcaaatgaaagatgtgcaattcttcgtagaaaaagagagatttgctct
tcacaagtccatggtttaattgcagagaattcttctttggtgcagtctttgagttttcgg
aatcctgaagatggccttgcaatgccatcactgctcaattctcagattcatgcagatagt
cagatgcctgaaaatcagggtggtaggcacaggctttctgaagaacattctgagcagcca
gttgataagcatgaggcacggccacactatcatgataagcttgctgccagcacagctgat
cccagctctgtgactgctgccaatgctgatagcgtcctttcagattacatggaggatgat
cttctcttccccactagacaggcaagatcagaatgcactttggatctggagaatcaaatg
gaagaaactatacatgtatattctgaggaaaacagacaagtttctggtgacagtgctcag
gattatgaacttttagaagcttctttgaggtctagattggttgaaagatttgggaagaaa
tcatgcttgaatgtcaccattgatgaaggcactgaagaacttgctcttggaaaagtagct
gcaggacatggcaagcagtcaatgtatgttggacatcagttacaggaagcagagcagaat
attatgacaactactcctgaaggtacaatggagctggaaaacgatggtgctgaaaaaact
ggcggcctctctaattctagtagtggtccttcaatgggcaactgtgatcctgaggacaac
atttcttctctcaaagagttatgcatgccattggctatggacactctcatttttccttct
tcagctccactaaatgccgctagacaaatcaagcgagcattacctgggatttgcaaggac
ccttcagattacaaaaatgactatctgaccagtgatgcagcgtctgaagttacagaaagt
gtacaagatatgatgcatgaccttgttggagaaaatatgaagattctcccaactacccaa
aaggataataatatggtacacagtgtgattgatcctttctggcccttctgcatgtttgag
cttcgaggaaaatgcaatgacgaagagtgccagtggcaacatgttgagcatcatgcttgg
agaaagccaaagcttaaaaaacattctatgacctctgtttcaggccagattccttatggt
ttgtctcagcatattcttcctgtgccagtgtatcttgtcggttcaaatcttattaaagct
gatctgaacttgacacagtcagttttggctagcagtttatggcaatattggcaaaggggg
ttttgtgcttcctttcctttacctttatctgttcaaagagttcttccatcagatgcaccg
ttcttacaggctggtgatggctggattgctgattttgataggaacagacaactattaaaa
tttcgaatgctggatagcaggaagaataagattgtacagggtcctgttgatattgaatta
ttcttggaggcagctcttgatttatattgtggaaaaggaaacaagcctgaaaggatcaag
gctctttcatttctggcgcggtctattgaggctgatccaagtacagttatcctgtgggtg
ttttatctccatatttactatcaaaaggatgaaggacttggaaaagatgacatgtttttt
catgcggtgcaacacaatttttgttcctatgaattatggcttatgtatataaatagtagg
ttacgtgttgatgatcgattggatacttataacgatgctttgagcatgctctgccaaatg
acagctgacagtgacaaggatctacaagaaagaagtgctttcatactagacatcttctta
cagatgatttacttcctgtgcatgtctggaaatgtagagaaggcaatttctaggattatt
ggaatacttccaactgcaatgcctgataattgtggtgacaagttgcttgctgatgtcatt
tctagcttgaccatgtccgacagatgcatattttggatttcctgcctatatatctcaatt
tacaggaaccttccagaggaaattattgatcagctagagttccagaaagctttgcctcgt
gccttaaaatggccttctattgatcccagcgtagctaacagagataagattatagaactt
ttaaattatgctgcttataagatggctgaagatattagtgagtgtgttaaaaacggggat
ccatcttacctgatgttatcgcaattcctcactgttaaccacattagttgtctagcggct
gttgaaggttttaaatcttctgctgatatgctggtgacgtacatgaaggagtacccaatg
tgtcctcagattctgcttatctcagctcggttagacagaaagcatggtacatgtcctggt
ctgaaaagctttgatgagttgatcttgaattggcctaaagaggcacaaggaattcaatat
atgtggaatcaatatgttgagcatgttctggccactgataccgagttagctgagaaggta
ctgacttgctggtttgatgaacacggaaaagattgtgatatccaaaccaattctgctatt
tgtatagaactgagcagcgaagagcctggaacatcatcacttgtttctccccaggaagtt
ggctctggtccatctacatcagaagatctcatctttcggttattaaacctctcattgtac
aagatactagagaacaacctacaggaagcacaaattgctgtggataaagcattgaaattg
gctcatggggagtggtacgagcactgtataagagaacatgctgcaattcatgcactggag
ctggagaaatcatcgtcttcgacagatgctcaaactcaggctacattcagtttaatcatt
ggttaccttgcagataatcgcaacttgccaacaagggagctgctgtcacgaaggttttgc
caaaatgttaagaaacataggcttaggcagcttatagatgacactattggttctgttcct
gcagattcttctctgataaactctgcccttgaagtgtgctttggtccgtctctccttcca
aaaagaattggcgatgtgaagtacctggtagattttgttgaaacggtcatggaggctctt
cctgcaaactatcgcctaggtttagcagttggtggatttgtagctaagcacttcagtggt
tctgatgcaacctccactgggaccaggttctgggcaagttctgttctgatcaacgccatc
ttccgagctgtacctgtcgcaccagaatcagtatggctagaaggcgcagatctcctgcag
aagttgcatgtcacagagattgtaaagaggttctaccagcaggcagcatcggtctacccc
ttctccttcaagctgtggcacgcgcatctgaattactgcaaagccagtgggagcaacact
gagagcatcgtggagaatgcgaggcagcgtggcattgagctgaatccgacaccaacatag
DBGET
integrated database retrieval system
