Sorghum bicolor (sorghum): 8068447
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Entry
8068447 CDS
T01086
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A
KO
K15559
regulator of Ty1 transposition protein 103
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8068447
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
8068447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
TEX13
RPW8
Drf_FH3
Motif
Other DBs
NCBI-GeneID:
8068447
NCBI-ProteinID:
XP_002448609
UniProt:
A0A921QUW9
C5YGS1
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Position
6:complement(57521510..57524486)
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AA seq
527 aa
AA seq
DB search
MNSAFSEDILADKLAKLNNTQQCIETLSHWCIYHRKNAEQIVQTWDKQFHSSGKEQMVPF
LYLANDILQNSKRNGTEFVEEFWKVLPGALKNVSENGDDRGKKVASRLVDIWQERRVFGS
RAGGIKDVMLGAAPLPDLDMTKKRSHSSSIRIVKRDSRSVKLRLGIGGTAERIVSALHTV
LSEQADEDADLEKCKTSMRRVGKMEKDVNSACIRAQDPRREGLCTELKDEEANMKNCIEK
LKVVETNRAAVVSELKEALQEQESELEKVRTQLQLAEAMVHEASNMQRRLKNEPTIPLPK
SASSVEPGKVLSNGQVKEQQKTAAAILADKIAASSNSQQILQSALSKFAAEEAKNSSEAR
SDKRQKTDQLSQVPSVANAAAFVPMPQVVATAAQQQPQAMLVQQAPMQSQSPASQPQYNI
YQASPQQFVPQPGGVMMGMPYNMSTMAPPPPPPPPQMMNLGRPSPSAPQPQMAVMPQSQP
PTPPMLQQQMPMNLAPQMQFALQPPGIPPFRPLQPPPGMQYFHPQSQ
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcgcgttcagcgaggacatactcgctgacaagctcgccaagctcaacaacacg
cagcaatgcatcgagacactgtcgcattggtgcatttaccatagaaagaatgcagagcaa
attgttcagacttgggacaagcagttccacagctctggcaaggagcagatggtccctttc
ctttatcttgctaatgacatcttacagaacagcaagcgcaacgggacagagtttgtagaa
gaattttggaaagttctccctggggcgcttaaaaatgtaagcgagaatggtgacgaccgt
gggaagaaggtggcatctaggctggttgacatatggcaagaaaggagagttttcggttca
cgtgctgggggcatcaaggatgtgatgcttggggcagctccccttcctgatttagatatg
accaaaaagcgctctcacagttcttcaataaggattgttaaaagagattcgcgttctgtg
aaacttagactaggcattggaggaactgcagagaggattgtatctgcattgcacactgtt
ctcagtgaacaagcagatgaggatgctgacctggaaaaatgcaagacttctatgcgtcgt
gttggaaagatggagaaggacgtcaacagcgcttgtatcagagcccaagatcctcgtcgt
gagggtctttgcacagaactaaaggatgaggaggctaacatgaaaaattgcatcgaaaag
ctaaaagttgttgagacaaatagagcagctgttgtgtctgaattgaaggaggcattgcag
gaacaggaatctgaactggagaaagtccgcactcagttacagctagctgaagcaatggtg
catgaagcctccaacatgcagcggagactcaagaatgagccaaccattccgctgcccaaa
tcagcatcttcagtagagccaggaaaggtgctttccaatgggcaagtaaaggagcagcag
aagacagctgctgctatccttgcggacaagattgcagcatcatcgaactctcagcagatt
ctgcaatctgcactttccaagtttgctgctgaagaagcgaagaattcatctgaagcacgc
tcagataagaggcaaaaaactgaccaactttcgcaggtaccaagcgtcgcgaatgctgct
gctttcgttccaatgccacaagtggttgccacagcagctcagcagcagccccaggcaatg
ttagtgcaacaagcacctatgcagagccaatcccctgcatctcagcctcagtacaatatc
taccaggcctctccccagcagtttgtccctcagcctggaggtgtaatgatgggcatgcct
tacaacatgagcaccatggccccgccacctccgcctccaccaccccagatgatgaaccta
ggaaggccctcaccttcagctccacagcctcaaatggctgtcatgccgcagagccagcca
ccaactccaccgatgcttcagcagcagatgccaatgaacctagcgcctcagatgcagttt
gcccttcagccgcctggtattccacctttcaggcccttgcagccacctcctgggatgcaa
tacttccatccccaatctcagtga
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