Sorghum bicolor (sorghum): 8070136
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Entry
8070136 CDS
T01086
Name
(RefSeq) transcription factor PIF4 isoform X1
KO
K16189
phytochrome-interacting factor 4
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
8070136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbi03000
]
8070136
Transcription factors [BR:
sbi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
8070136
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Gene cluster
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
8070136
NCBI-ProteinID:
XP_021302233
LinkDB
All DBs
Position
8:59717590..59727607
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AA seq
518 aa
AA seq
DB search
MRCSHSLTERQPAMNQYISDWSGAMGDTFALPLGLGLVPIPTDHSIPFHFPTESMADAVR
RRAAAAAAAVVVVCSGGGGGGEDDDGLIELMWCNGHVVMQSQAAPRSNKPPRPDKAAPAA
AAVQEDDDAAAQAWFQEQYPVEEEDPLERDDLFSELFGEAQAAVDGARGACSCKEEAEED
ARQSISGMMPPPPPMRPRDDKACTGDASLDAATATEGAESSMLTIGSSFCGSNHVQTTTG
GAGTDVVVVVARARGAATDTSSATRSRSCTTRNEHPCPGAAAAAAAAHRSGKRKQSVDAT
DAEDVEFESADVTCEPAHKTATAKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKT
DKASMLDEAIEYLKSLQLQLQMMWMGGGMAAAAAPVVFPAGVHQYMQRMVAAGPAPPPHM
ASMPAMPFMAPPPAVQAPPLPDLYARYLAVDHHLPPLPPMVASPYTHCLQSAMGFYQRQN
PALPPLPAVPAPAPSPSDGILHKKYENCGKPEIQGITG
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgctctcactcactgactgagaggcagcccgccatgaaccagtacatctctgat
tggagcggcgccatgggcgacaccttcgcgctgccgttggggttggggttggttccgatt
ccgaccgaccattccattccatttcatttcccaacagagtccatggctgacgcggtgcgg
cgtcgtgctgctgctgctgctgctgctgttgttgttgtttgcagcggcggcggcggcggc
ggcgaggacgacgacgggctcatcgagctcatgtggtgcaacggccacgtggtcatgcag
agccaggcggcgccgcggagtaataagccgccgaggcctgacaaggccgcgccagcggcg
gcggcggtgcaggaggacgacgacgcggcggcgcaggcgtggttccaggaacagtacccg
gtggaggaggaggacccgctcgagagggacgacctcttctcggagctcttcggagaggcg
caggcggccgtcgacggcgccaggggcgcgtgcagctgcaaggaggaggccgaggaggac
gcgcggcagagcatcagcgggatgatgccgccgccgccgccgatgaggccgcgggacgac
aaggcgtgcacgggagacgcctccctggacgctgccacggccacggagggcgccgagtcg
tccatgctcaccatcgggtccagcttctgcgggagcaaccacgtgcagacgacgacgggg
ggtgccggtacggacgtcgtcgtcgtcgtcgccagggcacgcggcgccgcgacggacacc
tcgtcggcgacgcggtccaggtcctgcaccaccaggaacgagcatccctgtcctggcgct
gccgctgcagcagctgctgcccaccggagcggcaagcggaagcagagcgtcgacgccacg
gacgccgaggacgtggagttcgagtccgccgacgtcacgtgcgagccggcgcataagacg
gcgacggccaagcgccgccgcgccgccgaggtccataacctctccgagcggagaagaagg
gacagaatcaacgagaagatgaaggccctgcaagagctcatacctcactgcaacaaaacg
gacaaggcgtcgatgctggacgaggcgatcgagtacctcaaatcgctgcagctccagctg
cagatgatgtggatgggcggcggaatggcggcagcagcggcgccggtggtgttcccggcg
ggggtgcaccagtacatgcagcggatggtggccgccgggcccgcccctccaccccacatg
gcttccatgcccgcgatgccattcatggcgccgccgccggccgtgcaggccccgccgttg
cccgacctctacgcgcgctacctcgccgtcgaccaccacctgccgccgctgccgcccatg
gtagcatcaccatacacgcattgcctgcagtcggcgatgggcttctaccagcggcagaac
ccggcgctgccgccgctaccggccgtgccggcgccggcgccgtcgccttccgacggcatc
ctgcacaaaaaatacgagaattgtggaaagcctgagatccagggtatcaccggctga
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