Sorghum bicolor (sorghum): 8071074
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Entry
8071074 CDS
T01086
Name
(RefSeq) LOW QUALITY PROTEIN: DNA replication ATP-dependent helicase/nuclease DNA2
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
8071074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbi03032
]
8071074
Enzymes [BR:
sbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
8071074
DNA replication proteins [BR:
sbi03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
8071074
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
8071074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
AAA_30
AAA_19
PDDEXK_1
UvrD-helicase
Dna2_Rift
SLFN-g3_helicase
ResIII
nSTAND3
PhoH
Motif
Other DBs
NCBI-GeneID:
8071074
NCBI-ProteinID:
XP_021318970
LinkDB
All DBs
Position
6:54837726..54854903
Genome browser
AA seq
1286 aa
AA seq
DB search
MPPKRRAAAAASSKKPQPSQPSQPAKFGILHFFERQTQASQNAKRQKSDLPAPPPPPPPP
PPPPEEEPSEVSPEVTKTHAPKRVRFSPGMLIKQSQDDGAAEVVTWKISPVNHRFGTAKS
KQFLGMTPHPYSSEKNSSLEAMKKWHSSPLGLSRCNTLGRNSGVLGSALVGCDGVEDTQS
PFRTPPSLSYGCNEQLSSGVTFEGGLEPLGAGQHKKALLDLLDQVEDAIMEEELPVDPGN
KGGQATNKDNTNNSCSPVADGDLTIPSKKTINAPPFNSFLVLEVSEKHKADDSSCDRYPV
KILRLLNEHSGKECAVHLCDEWFHSIVGPGDTVNVIGEFSDQGKCTVDHDNNLVIVHPEL
LISGTRVASSFHCPRRSVLDDRLKGNEYSTSALTGILLHQVFQAGLLKDAPSRQFLEQEA
KEVLLKNIETLYACGANESNMYSTLIEAIPKMLNWYKCFLKGSKCSNVDFGHNEGRKTVG
VTEVMDIEEMAWAPRYGLKGVIDASVRSRVESGNGGSYDRIMPLEFKTGKGTSGQTAMEH
SAQVILYTLLMTERYLNEDIDLGLLYYLHTDQTLGIKVKRADLIGLIMRRNELATEILKA
SISQSFPPMLQSPSTCNGCRHLISCTIYHKAHGGNATTSGLGDLFDNLVNHLTVAHHSFL
KHWDRLIDLEARVSQVKKKNIFQPHNSNSRSGNSAVPYFVLDIKNGHSIDSSGKSTRYIY
NFVQQKMQSETADQLDTQFDSLDFSLKIGDPVVLSTQSGRIAVANGSIREISHSLITVSL
PRRLRIPDSNSLSERQDLTREIWRIDKDEFSSSFAIMRLNLVQLFAQNPQNTQLRKLIVD
LEAPRFDSGGLFSQDPALPYIRSLPNLNGDQQRSLHKILGAKDYALILGMPGTGKTYTMV
HAVKSLLIRGESILLTSYTNSAIDTLLMKLKTEGVDFIRIGRPDSVHPDVRAHCLSTTEA
QSVDAIKARMEQVQVVGVTCLGMYHPLLAHKKFDTCIMDEAGQITLPVSLGPLMLATKFV
LVGDHYQLPPLVQSSEARENGMGISLFWRLSEAHPQAISALRCQYRMSSGIMELSNSLIY
DNRLCCGSSEIANAKLKFSHREPVHFKLEEILNPDKAVIFANTDQIPALEAKEHRTVNNP
TEAHIISWIIKELLRRGVAQDAIGIITPYNAQVNIIQQCTDGLVEVHTIDKYQGRDKECI
IVSFVRSTANSRASGSSLLGDWHRINVLLTRAKKKLIMVGSRGTLSTIPLLRLLVDKVAE
IGGLLDLTNKDVHSFLELKGSRLNAQ
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgaagaggcgcgccgccgccgccgcctcttcaaagaagccgcagccatcgcag
ccgtcgcagcccgccaagttcggcatcctccacttcttcgagcgccagacccaggcctcc
cagaacgccaagcgccagaagtccgacctccccgcgcctccccctcctcctcctcctccg
ccgccgccgcccgaggaggagccctcagaggtctcgccggaggtcaccaagacgcatgcg
ccgaagcgtgtcaggttttctcccggaatgctgattaagcagagccaggacgatggggcc
gcggaggtggtgacttggaagatctcgccggtgaaccatcgctttggtacggcgaagtcg
aagcagtttctcgggatgacacctcatccgtactcaagcgagaaaaattcctcccttgag
gctatgaagaagtggcattcatctccattgggcttgtcaaggtgtaatactttggggcgt
aattcaggagttcttggatctgctctagttggttgtgatggtgtggaggatactcagagt
ccatttcggaccccaccatcactttcctatggctgcaatgagcaactgagcagtggtgtc
acttttgagggaggtctcgaaccattgggagcagggcagcacaaaaaggcattacttgat
cttctagaccaagtagaggatgcaatcatggaagaagaattgcctgttgatcctggaaat
aaaggagggcaagccacaaacaaggataataccaacaatagctgttctcctgttgctgat
ggtgacttaactatcccatccaagaaaaccattaatgctccacccttcaatagttttctt
gtcttggaggtgtcagaaaaacataaagctgatgattcatcgtgtgatcgctatcctgtt
aagattctgcgtctgctgaatgaacactctgggaaagaatgtgccgtgcatctgtgtgat
gagtggttccacagtattgttgggcctggtgatactgtaaatgtcattggagaatttagt
gaccaaggaaaatgtactgttgatcatgacaataatcttgttattgtccatccagagcta
ctcatttctgggacacgggttgcttctagcttccattgtccaagaaggtctgttcttgat
gaccgactaaaaggcaatgaatattctaccagcgcgttgactggtattctgcttcaccaa
gtctttcaggctgggctactcaaggatgctccttcacggcaattcttggaacaggaagca
aaggaagttcttctgaaaaatatagagactttatatgcatgtggagccaatgaaagcaac
atgtactccacgctcattgaagctatccccaaaatgttgaattggtacaagtgtttctta
aagggttcaaagtgttctaatgttgattttggacataacgaagggagaaagactgttgga
gtgactgaggtgatggatattgaggaaatggcatgggcgccaagatatggtttgaaaggg
gttatcgatgcttctgttagatcaagagtcgagtcaggaaatggtggttcatatgataga
ataatgccactagagttcaaaactggtaaaggaactagtggccagacagctatggaacac
tctgctcaggtgatattatacacactgttgatgacagagagatacttgaatgaggatatt
gacttgggccttctttattatcttcacacagaccagacattgggcattaaagtaaagagg
gctgatttaattgggctaataatgcgtcgcaacgagcttgctaccgagatcttgaaggca
tctatttcacagagttttcctccaatgttacagagcccatcaacatgtaatggatgtcga
cacctgatttcttgtaccatatatcacaaggcacatggaggcaatgctacaactagtggg
cttggtgatctatttgataaccttgtaaatcacttaacagtcgcgcatcatagttttctt
aaacattgggatagattgatcgatcttgaagctagagtttctcaggtaaaaaagaagaac
attttccagcctcataattcaaactctcggagtgggaactctgctgtaccttattttgtt
cttgacataaaaaatgggcattcaatagattcttcaggaaaaagcacaagatacatatat
aattttgtccagcaaaagatgcagtctgaaacagctgatcagttagacactcaatttgac
agcctagatttcagcctcaaaattggtgatcctgtggtgcttagcactcagtctgggaga
atagcagttgcaaatggatctataagagaaataagtcactccctcataacggtctctttg
ccacgtcgtttgagaattccagatagcaattccttgtcagagcgacaggatctgacacgc
gaaatttggcggatagacaaggatgaatttagttcttcatttgcaataatgagactcaac
cttgtccaactatttgctcagaatccacaaaacactcaactacgcaagttgattgttgac
cttgaggcgcccaggtttgatagcggaggactgtttagccaagatcctgcactaccatat
ataaggtcgctaccaaacttgaatggtgaccaacaaagatcactgcataaaattctagga
gcaaaggattatgctcttattttaggaatgcctggaacaggcaaaacatacacaatggtg
catgctgtgaagtcattattgataagaggggaatctattttgctaacttcatatactaac
tcggctattgatacactgctcatgaagttgaagactgagggtgtggattttattcggata
ggaaggcctgattctgtacatcctgatgtcagggcccactgcttgtcaacaactgaggca
cagtcagttgatgccattaaagcaaggatggagcaagtgcaggttgttggagttacttgc
ttgggaatgtatcatcctttactagcacataagaagtttgacacatgtatcatggatgaa
gctggacaaattacgttgccggtttcactgggacctttgatgcttgcaacaaagtttgtt
ctagtaggagaccattatcaacttcctccacttgttcagagttctgaagcccgagaaaat
gggatgggcatcagcttattttggaggttgtcagaagcacatcctcaggcaatttcagca
ctgcgttgccagtaccgtatgtcatctggtatcatggagctctcaaattcgttgatttac
gacaataggttgtgctgtggttcatcggaaattgcaaatgccaaactcaagttttctcat
agggaaccagtgcactttaagttagaagagatcttgaatcctgataaggctgtgatcttt
gccaacacagatcaaatacctgcacttgaggcaaaggaacacagaactgtgaacaatcct
acagaagcacacattatttcatggatcatcaaagaattactacgaaggggtgtagctcaa
gatgctattggtatcataaccccatataatgctcaagtgaatatcattcaacaatgcact
gatggtttggttgaggttcacacaattgataaataccagggcagggataaggagtgtata
atagtatctttcgtgcgctccactgcaaactcaagggctagtggttcttctctgcttggc
gattggcacaggatcaatgttctgttgacacgtgcaaagaagaagctcatcatggttggg
tcacgtggaacgctttcaacaatacctttgctgaggcttcttgtggacaaggtagctgag
attggtggcctgttggatctgacaaataaggatgtgcattcttttttggaacttaaaggt
tctcgtttaaatgcacaatag
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