KEGG   Sorghum bicolor (sorghum): 8073056
Entry
8073056           CDS       T01086                                 
Name
(RefSeq) probable CCR4-associated factor 1 homolog 9
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    8073056
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbi03019]
    8073056
Messenger RNA biogenesis [BR:sbi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     8073056
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     8073056
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 8073056
NCBI-ProteinID: XP_002437048
LinkDB
Position
10:42245547..42246401
AA seq 284 aa
MSLNFGSLQFLALESPSQAVHPAGTPTSPLTSSSPPFVMAHYASLYHGGASMPPLPPGIP
VRSVWKDNLELELRFLHSFVHNARYAAVNIHYPGVIHNGSQKHTSQTADERYSVVKANVD
ALKPIQVGLAIYNDFGHIVAWEFNLRGFHPVTDPHAANSVGYLQERSLSFDEHQVHGITA
LRLATGLSGCGLFRRPQISWTTYAGLYHVGYLMKYLSMGNQLPDSLGGFLDMVRQFLGQD
VYDVARIAVDCALPPGLEHVASSLFLVPAALSPRLAGAGSLLAL
NT seq 855 nt   +upstreamnt  +downstreamnt
atgagtcttaattttggttcgctgcagttcttggcattagaatcgccatcgcaagctgtg
catccggccggcacgcccacgtctcctctcacatcatcgtcgccacctttcgtcatggca
cactacgcgtcgctatatcacggcggcgcttccatgccgccgctgcctccggggatcccc
gtccgcagcgtatggaaagacaatcttgagctcgaactgcgcttcctccatagctttgtt
cataacgcccgctacgccgcggtgaacatccattaccccggcgtcatacacaacggcagt
cagaagcacacctcgcagacggctgatgagcgatacagcgtggtcaaggccaacgtcgac
gctctcaagcccatccaggttggcctcgccatctacaacgacttcggccacatcgtcgcc
tgggagttcaacctccgtggcttccacccggtgacggacccgcacgccgccaactccgtc
ggatacctccaagaacgcagcctaagcttcgacgagcaccaggtgcacggcatcacggcg
ttgaggctagccacgggactcagtggctgcggcctgttccgccggccgcagatatcctgg
accacctatgccggcttataccacgtcgggtatctcatgaagtatctgtctatgggtaac
cagctccccgacagtctaggtgggttcctcgacatggtgaggcagttcctcggccaagac
gtctacgacgtggcccggatcgccgtcgactgcgcgttgccgccgggactggagcatgtg
gcgagcagcctctttttggttccggcggccctgagccctcggctcgccggcgcgggcagc
ctactcgcgctgtaa

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