Sorghum bicolor (sorghum): 8073687
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Entry
8073687 CDS
T01086
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
8073687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8073687
03036 Chromosome and associated proteins [BR:
sbi03036
]
8073687
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
8073687
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
8073687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
8073687
NCBI-ProteinID:
XP_002446695
UniProt:
A0A921QRD9
C5YAX6
LinkDB
All DBs
Position
6:49201721..49207638
Genome browser
AA seq
943 aa
AA seq
DB search
MFGSTNPFGQSSTSPFGQTSFGTPQGFGQSSTAANNPFAPKPFGSPTTTFGAQTGSSLFA
TTSTGAFGQQQSTPAFGTTSTGAFGQQQSPPTFGTPASSPFGSSTPAFGASPTPAFGASP
TPAFGATSSGSLFGQKPSFGGFGSSPSQSSPFGSTFQQTQPTFGSSTFGASTTPAFGTTT
TPTFGTTTTPAFGTTTTPAFGTTTPAFGTTTTPAFGATTTPAFGSASTSLFGASSTPTFG
STAFGTSATGFGTSGTTTFGVSSTTPGFGSSSTPSFGTSTSAFSFGSSPSFGQTAVSSGS
TPFGATPSPFGAAAPAFGSQTAAPAFGQPQFANQAGGTRIKPYAQTPDVDSATSGTQPAA
KLDSISAMPEYKDKSHEELRWEDYQRGDKGGPNPSGTPAAAPSFPSSQQNAFAPTSNPFN
PPATNPNNPFAPKPSPTITSFSSSSPFTSSSSTTMFGQTGVSTFPANNSPSLFGNTNPAP
ATSSLFGTSMTNNLSSFGTGSSLSNTQSAPAPLFSSAFAQPISSTPAFSSGSLFGSTNPG
NLFSSSGPSLFQTSTFQPSAPAQTSNIFSFQPPPTQPAPSTGGFPGFSNTTNQALMGQPT
PSQSSMVMQPAPVSNPFGTLPAMPQMSIGNGGSSPSVQYGISSLPVAEKPLQSRALSMAV
PRHLSQRRIKLLPRKYNPISDGKVPFFAEDEESPATPKADAFFIPRENPRNLVIRPIEQW
PSRRETDRQLTLKNATYLNKYEDASTESERGKSAMSPSSRPPAVENNNQHEARAMAQHEN
GNVTSVERLLPKLPRADYFTEPSIEEIAAKERAQAGYCGQVRDFVVGRHGYGSIKFFGET
DVRCLDLESIVEFNNREVIVYKDDSKKPPVGEGLNKAAEVTLLNIKCVNKKTGEQYCEGA
RVERYREMLVKKAEEQGAEFVSFDAAKGEWKFRVKHFSAYGLW
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctccaccaacccattcgggcagtcgtccaccagcccatttggccagacctca
tttggaactccgcagggattcggccagtcttccactgctgccaacaatccctttgcccca
aaaccatttggcagcccaacgacaacttttggggcacagactggaagctcgctctttgca
actacatccactggtgcctttggtcagcagcaatccactcccgcattcggcacaacatcc
actggtgcctttggccagcagcagtcccctcccacatttggcaccccagcctcctctccg
tttgggagctccacaccagcttttggtgcatcccccactcctgcctttggtgcatccccc
actcctgcctttggtgccacatcctctggatctttgtttggacagaagccaagttttggg
gggtttggatcatctcctagccagtcaagtccttttggtagcacattccagcaaacacaa
ccaacatttggcagcagcacttttggtgcatcaactacaccggcatttggtaccacgact
acaccgacatttggtaccacgactacaccggcatttggtaccacaactacgccggcattt
ggtacaactacaccagcctttggcaccacaactacaccggccttcggtgccacgactacc
ccagcatttggttcagcatcaacatctttattcggtgcttctagcaccccaacgtttggt
tctacagcctttggtacatctgctactggttttggaacttcagggaccacaacatttggt
gtgagtagcactactccgggttttggatcttcaagcacaccttcatttggcacatcaact
agtgccttcagttttggctcttcaccatcttttggacaaacagcagtttcctctggtagc
actccctttggagcaactccgtcaccttttggtgcagcagctcctgcatttgggtcacag
acagcagcgccagcttttgggcaaccacaatttgctaatcaagctggaggaaccagaata
aaaccttatgctcaaacaccagatgttgatagtgctactagtggtactcagcctgctgca
aaacttgattccatatcagcgatgcctgaatacaaagacaagagtcatgaagaattgagg
tgggaagactatcagcgtggagacaagggtggaccaaacccttctggaactccagcagcg
gcacctagctttccatcatcacaacagaacgcttttgctccgacaagcaatccatttaac
ccgcctgccacaaacccaaacaatccatttgctcctaagccttctccaactattacttca
ttcagcagttcaagcccattcacatcatcctctagtacaacaatgtttgggcaaacgggt
gtttctacatttccagctaataattcgccatcattatttggaaataccaatcctgctcct
gctacatcgtcattatttggcacatcaatgacgaataatctaagttcattcggcactggc
tcatcattgtctaacactcaatcagccccagccccactattttcctcagcatttgctcaa
ccgatatcaagtacaccagctttctcctctgggagcctatttggctcaactaatcctggc
aatctgtttagcagtagcggtccttcactttttcaaacatcaacatttcaaccatcagcc
cctgctcaaacttcgaacatattctccttccaacctcctccgactcaaccagcaccttct
acaggtggattccctggtttttccaacactacgaatcaggccttgatgggacagccaact
cctagccaatccagtatggtcatgcagcctgctcctgtttcaaatccatttgggacgctt
ccagcaatgcctcagatgtccattgggaatggtggatcttcaccatcagttcaatatggg
atatcaagtttgccggttgctgagaagcctcttcaaagtagagcattgtccatggcggtt
cctaggcatttgtcacagagaaggataaaactgctgccgagaaaatataatccaatatct
gatggcaaggttccattctttgctgaggatgaagaatctccagcaacaccgaaggcggat
gcttttttcatccctagagagaacccaaggaatctggtaattcgtccaattgagcagtgg
ccttcacggagagaaacggaccggcaattgactttgaagaatgccacttatttgaacaaa
tatgaggatgcttccactgaaagtgagcgtggtaagtctgccatgtcaccaagcagcagg
cctcctgcagtggaaaacaacaatcagcatgaggccagggccatggctcagcatgagaat
gggaatgttacttcagtcgagaggctattgcctaagcttccacgtgcagattacttcaca
gagcctagtatagaggagattgcggccaaagaacgtgcacaggcaggttactgtggtcag
gtgagggactttgttgtggggcgacatggctacggcagcatcaagttttttggggagact
gacgtgaggtgcctagatctagagtcaatcgtggagttcaacaaccgggaggtgattgtg
tacaaggacgacagcaagaagcccccggtgggtgaggggctgaacaaagctgcagaggtg
actcttctgaacatcaagtgtgtgaacaagaagactggggagcagtactgcgagggggca
agggtggagaggtacagggagatgctggtgaagaaggccgaggagcagggtgcagagttt
gtgtccttcgacgctgccaagggagagtggaagttcagggtgaagcacttcagtgcctat
gggctttggtga
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