Sorghum bicolor (sorghum): 8075300
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Entry
8075300 CDS
T01086
Name
(RefSeq) polygalacturonase At1g48100
Organism
sbi
Sorghum bicolor (sorghum)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
8075300
NCBI-ProteinID:
XP_021311637
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All DBs
Position
3:16331901..16335256
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AA seq
692 aa
AA seq
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MPPSTSTRPQLHCPVPLLTTVVSMALLCFLVVVGADASRSLHCHRKHQRHHHGHHRTENY
SHVSMPPVAPPPDVDGDSPAEPPGLPPAVGGALPPCSCHDKPCLSPIKEPAGAPSTTPTS
SAKPPHFSLANPPSPAPATAPSHSPLNPPSSHQAPSKPPASSLAKPPSSAPVPDIAPSHS
HAKPPSSYATRTPSQPPKRAPEPAHPPAESKAPRLAPAKQPPAPSPSPSAAQPPRCSTAN
HPSLAPTASAKPPAHPPAAASKPIPPPPPALPPAAKNSSSGWGNVFDVRAFGASGNASGN
DTRAFRAAWKAACSSNTTTATLLVPSDGVFTISSTIFAGPCKSALTFQIDGVLMPPDGPA
SWPASDSRKQWIVFYKADGMTLAGEGTIEGNGEEWWDLPCKPHRGPNGSTLPGPCDSPAL
VRFFSSNDVAVRGLRIENSPQFHLKFDACDRVRVDGLFVSSPASSPNTDGVHVENTTSVQ
ILNSRIYNGDDCVSIGAGCSDVHIENITCGHGHGISIGSLGVHNTRACVSNVTVRNARIV
DSDNGVRIKTWQGGTGAVSAVEFAGVQMQNVKNCIVIDQYYCLGSGCANQTSAVRVAGVT
YRDIRGTYNPQAAGAPIRLACSDAVACTDITMSGVELLPASGGGGGGGRAGALLADPYCW
NAYGVMETLTLPPVYCLQEGRPESLQDQLTSC
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgtcgacaagcacgcggccgcagttgcattgcccggtgccattgctgacgacg
gtcgtttccatggcgctcctgtgctttcttgtcgttgtcggtgctgatgcaagcagatcg
ctgcactgccaccggaagcaccagaggcaccaccacggccaccaccgcacggagaactac
agccacgtctccatgccccctgtcgcgccacctcctgacgttgatggcgactctccggcc
gaaccgccaggtttgcctccggccgttggcggcgcgctgccgccgtgctcctgccacgac
aagccgtgcttgagccctataaaggaaccggcaggcgcgccaagtacgacgcccacttca
tcagccaaacctccccatttctccttggccaatccgccgtcgcccgcgccagccactgca
ccgtctcattctcctctgaatccaccgtcgtcccaccaggcaccgtccaagccaccggct
tcgtcgttggccaagccaccgtcgtcggcgccggtgccggacatcgcaccatctcattct
cacgccaagccaccgtcgtcgtatgcgaccaggacaccgtcacagccgccaaaaagggcg
ccggaaccagcgcaccctcctgccgagtcaaaggcaccacgactcgccccggccaagcag
cctccagcgccatcgccatcgccgtcggcagcccagccaccacggtgttccacggcaaat
catccgtcactagctcctacggcgtcagcgaagccaccggcgcaccctcctgctgctgcg
tcaaagccaattccgccgccgcccccggcgctcccaccggcggccaagaacagctcatca
gggtggggcaacgtgttcgacgtgagggcgttcggggcgtctggcaacgcctcaggcaac
gacacgcgcgcgttccgcgcggcgtggaaggcggcgtgctcgtccaacaccaccacggcg
acgctgctggtgccgtcggacggcgtgttcaccatcagctccaccatcttcgccgggccg
tgcaagtccgctctgaccttccaaatcgacggcgtgctgatgccgccagacgggccggcg
agctggccggcgtcggatagccggaaacagtggatcgtcttctacaaagccgacggcatg
acgctggcgggggaaggcacgatcgaaggcaacggtgaggagtggtgggacctcccgtgc
aagcctcaccggggcccgaacggatcaacgctgcccgggccatgcgacagccctgcactg
gtacgattcttctcgagcaacgacgtggcggtgcgcggcctgcgaatcgagaacagcccg
cagttccacctcaagttcgacgcctgcgaccgggtgcgcgtcgacggcctcttcgtcagc
tcgccggcgtccagccccaacacggacggcgtccacgtcgagaacaccacgtccgtccag
atcctcaactccaggatctacaacggcgacgactgcgtctccatcggcgccggctgctcc
gacgtccacatcgagaacataacatgcggccatggccatggcataagcatcggcagcctg
ggcgtgcacaacacgcgcgcctgcgtgtccaacgtcacggtccggaacgcgcggatcgtc
gactccgacaacggcgtacggatcaagacgtggcagggcggcacaggcgcggtgtcggcg
gtggagttcgccggcgtgcagatgcagaacgtgaagaactgcatcgtcatcgaccagtac
tactgcctcggaagcgggtgcgccaaccagacctcggcagtgcgcgttgccggcgtcacg
taccgggacatccgcggcacgtacaacccgcaggccgccggcgcgcccatccgcctcgcg
tgcagcgacgccgtcgcctgcacggacatcaccatgtccggcgtcgagctgctgccggcc
agcggtggaggaggaggaggaggacgcgcaggagcgctgcttgcggacccctactgctgg
aacgcgtacggagtgatggagacgctcacgctgcctcctgtgtactgcttgcaggaagga
cgcccggagtctctgcaagatcagctcaccagttgctga
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