Sorghum bicolor (sorghum): 8075550
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Entry
8075550 CDS
T01086
Name
(RefSeq) ribonuclease E/G-like protein, chloroplastic
Organism
sbi
Sorghum bicolor (sorghum)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
CBM_20
RNase_E_G_Thio
Motif
Other DBs
NCBI-GeneID:
8075550
NCBI-ProteinID:
XP_021312964
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Position
3:62339968..62360196
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AA seq
1118 aa
AA seq
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MPCSLLCTPAPCSFPSSSSQNTVAPPLFSSPCCARKGEPPPPQSGRLAAELPPWPGRQAG
AAAPRPASWLAPLPLGRASWLQAAAATPGSSLCAAHRCPGQPQQQRHATLVSCRDRPGHG
PDRRCPRPLCVIRSDDLAITCKGFCTISWNLKADVQDGCLIFITGDPVTLGCWESNMAVQ
LAPSVESNNIWTAEIKVPYGVHFKYNYFVREEMGSSSDIIWRPGPVYSLSIPSVGQKKQV
IVVKDLWMKASLAGLPTPSWGSWLMEAGSLGGELFDGGNNQSIVKDHSARDTSNQGLSVG
DHIIFKLGNGTPLHAKLLDNQSSIMHNSVTEIPNASYISQHGRSQIVEEPWILESIVAAK
KPVAKVKDKKGQKKFVNYKHTLSGVSKNMHQQDQPVEEPWLFQSMFELNETIVHANGKTE
ARDIIGKLRKIEKPPTPLDESKPSGGEPSSRVILMNSSVCTIQRIAVLEDGKLVELLLEP
IKNNVQCDSIYLGVVTKLVPHMGGAFVDIGISRPSLMSIKQNRDPFVYPQVFKNRGTDPI
DDSYCNEENLPTYENDDDMSDDEFENEETHDGSSFPVENITDNEEAVVLASDAKINNVDG
DEFDSISVYDEDKDEENDHMEDEYSEDILQGDQSEISNDLKTLSSIQHALRESNDDTNGS
RWSQVRKGTKVMVQVIKEGLGTKGPTLSPFPCLRSRFWILVSRGNKVGVSKKITGIERTR
LKGITKLLRPPGFTLTARTVAAGHSWEELQKDLDGLLSTWKGITEHAQSAALAAEEGVEG
AVPVMLHRAKGQTLSVVQDDFNEKVKRLVVDSPRTYHEVTSYLQEVAPELCSRVELYEKR
KPIFDVYNIEKEIDSILCKRVPLCNGGSLVIEQTEALVSIDVNGGHSMFGQGTSQEKAIL
EVNLEAAKQIARELRLRDIGGIIIVDFIDMSDDSNKRLVYEEMKKAVEKDRSTVGVSELS
KLGLMEITRKRVRPSVTFMISEPCTCCHGTGRVEALDTSFSKIEREICRRLATSRRKSDP
EKPKSWPRFVLRVDHEMCTYLTSGKKTKLGLLSSSLKVWILLKIARGFSRGAFELLPYSE
KENCAEKETSSELPQKEGRPKLSVFPIKKWMSRAKRAK
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgccctgctccctgctctgcacgccggcgccctgcagcttcccctcctcttcctcccag
aacacagtcgcccctcccctcttttcctctccctgctgcgccaggaagggcgagccgccg
ccgccccagtcgggcaggctggccgccgagctgccgccctggccgggcaggcaggccggc
gccgccgcgccgcggccggccagctggctggcgccactgccgctaggtcgggcgagctgg
ctgcaggccgctgctgccacgcctgggtcgagtctctgcgctgcgcaccgctgccctggc
caaccacagcagcagcgccacgccacgctcgtctcgtgccgggataggcctggacacggg
cctgatcggcgttgtcctcgtccgctctgcgtcatccggtcagatgatttagccataacc
tgtaaaggattctgtacaatatcatggaacctgaaagcagatgtacaagatgggtgctta
atattcataacaggagacccagttaccctgggctgctgggaatccaacatggctgttcag
ttggctccttctgttgaaagcaataatatatggacagctgaaataaaggtaccatatgga
gtgcatttcaaatataattattttgttcgagaagaaatgggttcctcttctgatattata
tggaggccaggtccggtatactccttatcaataccttcagttggccagaaaaagcaggtc
attgttgtgaaggacctatggatgaaagccagtctagcaggtcttcctactccttcatgg
ggatcatggctgatggaagctggttctcttgggggtgaactttttgatggtggaaataat
cagagcattgtgaaagatcactctgccagggatacatcaaatcaaggtttatctgtaggt
gatcatattatattcaagcttgggaatggcacacctttacatgcaaaactgttggataat
caatctagcatcatgcacaactctgtaactgaaataccaaatgccagttatataagtcaa
catggaaggtctcaaatcgtagaggagccatggattcttgaatcaattgtggctgcaaag
aaaccagttgcaaaagtcaaagataagaaagggcaaaagaagtttgtaaattataagcac
actttgagtggagttagtaaaaacatgcatcaacaggatcagcctgttgaagagccatgg
ttatttcaatctatgtttgaactaaatgaaactatagtccatgctaatggaaaaacagaa
gcaagggatattatcggaaaattaaggaaaatagaaaaacctccaacacctttggatgag
agtaagccgagtggtggtgaaccttcatcaagagttatacttatgaactcctctgtctgc
actattcagagaattgcagtattagaagatggaaaactagttgaactcttgctggaaccc
atcaagaacaatgtacagtgtgatagtatttatttaggtgtagtaacaaagctcgttcct
catatgggaggagcatttgtagatattggaatttcaaggccttcacttatgagcataaag
caaaaccgagatccttttgtgtatcctcaagtttttaagaaccgaggaacagatcctatt
gatgattcttattgtaatgaagagaaccttccaacttatgaaaacgatgatgatatgagt
gatgacgagtttgaaaatgaagaaactcatgatggttcatcatttccagttgagaatatt
acagataatgaagaagctgtggtgctagcatctgatgctaagataaacaatgtcgatggt
gatgaatttgacagcatttctgtttatgacgaagacaaggatgaagaaaatgatcacatg
gaagatgaatatagtgaggacatactgcaaggagatcaatcagaaatttccaatgatctt
aagactttatcttcaattcaacatgctttaagagaatctaatgatgacacaaatggaagc
aggtggtctcaagttcgtaagggcacaaaagttatggttcaagttatcaaggaaggattg
ggtacgaaaggtccaacacttagtccatttccatgcctgcgaagtcgattttggatattg
gtttcccgtggcaacaaagttggggtatccaaaaagattaccggaatagagcgcaccagg
ttaaagggcatcacgaaattactgcgacctcctggatttactttgacggctcgtacagtt
gcagctggtcattcctgggaggaactgcagaaggaccttgatggcttgctatctacctgg
aaaggaataactgagcatgctcaatctgctgccttggctgctgaggagggtgtggaaggt
gctgttcctgtaatgttgcacagagcaaagggtcaaactttatctgttgttcaagatgat
tttaatgaaaaggtcaagagactggttgtggattctcctcgaacatatcatgaggttaca
agctatcttcaagaagttgcacctgagctctgcagccgagttgagctttatgagaaaaga
aaacctatatttgatgtatataacatcgagaaggagatagacagcatcctttgcaaaagg
gtaccactatgcaatgggggttctctggtcatagaacagactgaagctctggtgtcaatc
gatgtgaatggtggtcacagtatgtttggtcagggaacatcacaggagaaggctatttta
gaagtcaatcttgaagctgcaaagcaaattgcccgtgagctgcgcttgagggatattggt
ggcattataattgtggattttatcgatatgtcagatgattcaaacaaaaggctagtatat
gaagaaatgaagaaagcagtagaaaaggatcgatcgacagttggtgtttcagaactatca
aagctaggtttgatggaaataactagaaaaagggtccgaccaagtgttactttcatgatc
agtgagccatgtacatgctgccatggtactggtcgtgtggaagctcttgacacatccttt
tcaaagatcgaacgtgaaatatgtcgacgtcttgctacctcacgacgaaaatcagaccct
gagaaaccaaaatcatggccaagatttgtgcttagagtggatcatgagatgtgcacgtat
ttgacgtcaggaaagaagacaaaactaggactcctgagtagctcccttaaagtgtggatt
ttgttgaagattgccagaggtttctcccgtggtgcttttgaactactaccatactcagag
aaagaaaattgtgcagagaaagaaacgtcatcagaattgccccagaaagaggggaggccc
aagctatctgtttttcctatcaagaagtggatgagccgggcaaagcgtgctaagtga
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