Sorghum bicolor (sorghum): 8075772
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Entry
8075772 CDS
T01086
Name
(RefSeq) protein transport protein Sec24-like CEF
KO
K14007
protein transport protein SEC24
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
8075772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8075772
Membrane trafficking [BR:
sbi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
8075772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
8075772
NCBI-ProteinID:
XP_021316869
LinkDB
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Position
5:44114941..44135157
Genome browser
AA seq
1105 aa
AA seq
DB search
MASTPPPQQQQQPPPPFAAQNPTAQGPVQGPPGSGAGALPGAFANLQISRGAAPPPGAPR
GLTPQQAPPAFAARPGPPPAAARPAFPGSPPAPPFVRAPTAATSASPPFGGQPGVVSQPP
PPFGGPPGASQPPPPFGVPPGAVSQAPPPFVGLPAVASQAPPSFGGPPATASQAPSPFVG
HSVAASQAAPFGGTPAAGSHPPPFGGPPVAGQQPALPLRPTFPGQSGPMAAAAAWTQPTP
PSFGAPQQPPPPFGSRPVGQPPFATQSAPVAQQLPFMGPPRANAPAFGPPSWQAQGAGSG
AMQPPMRMPGIPGSMQPNTLGPPGTPTIPYSPHAGTQVSTPSKIDPNQIPRPMPESSVII
YETRQGGQATIPPAASSEFIVKDTGNCSPRLMRCTVNQIPCTGDLLTTSGMPLALMVQPF
SLPHPSEEPIQLVDFGEMGPIRCSRCKAYINPFMKFVDQGRHFICNLCGFRNDTPRDYMC
NLGPDGRRRDADDRPELSRGTVEFVATKEFLVRDPMPAVYFFLIDVSMNAVQTGATAAAC
SAIAQAISDLPEGPRTMVGIATFDSAIHFYSLKRAQQQPLMLIVPDVQDVYTPLQTDLIL
PVSECRENLEQLLESIPNMFENNRVADSAFGAAMKAGFLAMKSTGGKLLVFQSVLPSLGI
GSLSAREAEGRANITTGDKEAHKLLQPVDNTLKTMALEFAEYQVCVDVFLTTQSYVDIAS
ISVVPQTTGGRVYYYYPFSALSDPAKLFNDLRWNISRPQGFEAVMRVRCSQGLQVQEYFG
NFCKRVPTDIDLPAIDSDKTVMVTFKHDDKLPENVECGFQCALLYTTVYGQRRIRVINLS
LSCTSLLANLFRCADLETQFACFLKQAANGIPTSPLPRIRDEATNTCINILQSYRKHCAS
VTSSGQLILPEALKLLPLYTLALVKSVGLRTDGRLDDRSYWISLVSSISVVLAVPLVFPR
LIPIHDLTSRDDDDSLVPSPLMLNSENVQEDGVYLLENGEDGLIYVGNMVNPGTLEQIFG
VSSLAALPVQLALDQFDNELSRKVNEVVNEIRRQRCSYLRLRLCRRGEPSGDFFRSFLIE
DKAPGVFSYVEFLVHVHRQIQSKMT
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgccgccgccgcagcagcagcagcagccgccgccgccgttcgccgcgcaa
aaccctaccgcgcagggcccggtccaggggccgccaggctcgggggcgggggctctcccc
ggggcgttcgccaacctccagatctcccgcggcgcggccccgccgcccggcgccccgcgg
gggctcacgccgcagcaggcaccacccgccttcgccgcgcgtccgggccctccgccggcc
gccgcccggcccgcgttccctgggagcccgcccgcaccgccgttcgtgcgggcgcctacg
gcggcgacttccgcctcgccgccctttggcggacaaccgggggtagtgtcccagccgccg
ccaccgttcggggggcctccaggtgcctctcagccgccgccgccgtttggtgttcctccc
ggggcggtgtcccaggcgccgcctccgttcgtaggccttcctgctgtggcgtcgcaggcc
cctccttcctttggaggccctcctgccacggcatcgcaggcgccttcgccctttgttggc
cactctgttgctgcgtctcaggcggcaccgttcggtggcacccctgctgcggggtcacat
cctccgccgttcggtgggccccctgtagcagggcagcagcccgcactgccactgcggccg
acattccctggccagtctgggccaatggcggcagcggcagcttggacgcagccaactcca
cctagctttggagccccgcagcagcctccaccaccatttggttcgcggccagttgggcag
ccgccctttgctacacaatcagcgcctgtggcacagcagctgccattcatggggccaccc
agggcaaatgccccagcgtttgggcctccatcttggcaagctcagggagctgggtctggt
gctatgcagccacctatgagaatgccaggcattcctggtagcatgcagccaaacacacta
ggaccccctggcaccccgactataccttattctccacatgctggaacccaggtctcaacc
ccgtccaaaattgatcctaatcaaattccacggccaatgcctgaatcatcagtcatcatt
tatgagacccgtcaaggtggccaagcaaccattcccccggctgcatctagtgaatttatt
gtgaaggacactgggaactgtagccctcgtttaatgcgctgcactgtgaatcagatacct
tgtactggtgatctcttgacgacttcgggtatgcctttagctctgatggttcaacctttt
tctcttcctcacccatctgaggaacctatacagcttgtggactttggagagatgggaccc
attcggtgttctcgttgcaaagcgtacataaatcctttcatgaaatttgttgatcaaggg
aggcatttcatctgtaacttatgtggattcagaaatgatactcctagagactacatgtgc
aacttagggcctgatggtaggcgacgtgatgctgatgacaggcctgaactgtctagagga
acagttgaatttgttgctacaaaggaatttctggttcgtgatccaatgcctgctgtatac
ttcttcctaattgatgtctccatgaatgctgtacaaactggtgcgactgctgcagcttgc
agtgctattgcccaggctatttcagatctgccggaaggtcctcggacaatggttggaatt
gcaacatttgattctgctattcacttctacagtcttaaacgtgctcagcagcagcctttg
atgctcatcgttcccgatgttcaagatgtatatacgccacttcagacagatcttattctc
ccagtttccgagtgccgggagaatctggagcagttgctagaaagtatcccaaacatgttt
gagaataatagggtcgctgattctgcttttggagcagcaatgaaggctggcttcctggcg
atgaaatctactggtggaaaacttctggtttttcaatcagtgctcccatcacttgggatt
ggttctttatctgcaagggaagccgaaggcagagcaaacattacaactggtgacaaggaa
gcccataaacttttgcagcctgttgacaacactctcaagacaatggcactagaatttgct
gagtatcaggtctgtgtagacgtattcctcaccacacaatcgtacgttgatattgcttct
atatccgttgtgcctcagactacaggtggccgggtctactactactatccattttctgct
ctttcagatccagccaagctcttcaatgatctcagatggaatatcagtagaccccagggt
tttgaggctgttatgcgtgtaaggtgcagtcagggtctccaagttcaggaatattttggc
aatttttgcaagcgtgttcccactgacattgatcttccagcgattgattctgacaaaact
gtgatggtcacgtttaaacatgatgacaagttaccagaaaatgtggaatgtggcttccag
tgtgcacttctgtatactactgtatatggacaaaggaggatccgagtcataaacctctca
ctttcatgcacaagtttgcttgctaatctttttcggtgtgctgatttggagacacagttt
gcatgcttcctgaagcaagctgctaatggcatcccgacatctccattacctcgtattcgg
gatgaagcaacaaatacatgcataaatattcttcaatcttaccgcaaacactgtgcatct
gtaacctcatcggggcagttgattctcccagaggctctaaaactgctgcccttatatact
ttggcactggtcaaaagtgtaggcttgagaaccgatgggcgattggatgatcgttcctat
tggatatctctagtctcatcaatttctgtagtactagctgttcctttggtgttccctaga
ttgattcctatccatgatctcacatcaagggatgatgatgattcccttgtacccagtccc
cttatgctcaatagtgaaaatgtacaagaggatggggtctatttattggagaatggtgag
gatggtctaatttatgtaggaaatatggtaaatccaggtaccctggaacaaatatttggt
gtctcttctttggctgcattaccagtccagttggcattggatcaatttgacaatgaactc
tcgaggaaggttaacgaagttgtaaatgaaataagacgccagaggtgctcatacttgagg
ttaagactatgcagaaggggtgaaccatctggtgattttttccggtcatttttaatagag
gacaaggcgcctggcgtcttctcctacgtggagttccttgtgcatgtccacaggcaaatc
caaagcaagatgacctga
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