KEGG   Sorghum bicolor (sorghum): 8076983
Entry
8076983           CDS       T01086                                 
Name
(RefSeq) uncharacterized protein LOC8076983
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    8076983
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sbi04121]
    8076983
Enzymes [BR:sbi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     8076983
Ubiquitin system [BR:sbi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    8076983
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_2 zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 Prok-RING_4 zf-ANAPC11 Baculo_IE-1 zf-rbx1 zf-RING_6
Other DBs
NCBI-GeneID: 8076983
NCBI-ProteinID: XP_002439942
UniProt: C5YZE6 A0A921U5B1
LinkDB
Position
9:52517899..52520248
AA seq 551 aa
MAADDAARSSRRMDLNLYLGLPRAPRARRPDLGSDLALGTPMLSSSSPSSSAASADAPPL
ETDPLHPPYSPTRADLVRPPTPAHEPYNPFAPEAHPPYVPPPPLPVPGALPVLADELEFG
FPDAHLGVVERLDRPSSSTASSPFRPDRAERYRRFMSLGGSRYFRPRRFRSDLPPLSSEA
PSLENDAAAQPPEREEPVHDTVEENKVVTDGAVVGVSEDDGTEHGKSAAMFECNICFEMA
EEPVVTSCGHLFCWPCLYQWLHVHSSHKECPVCKGEVTEGNITPIYGRGNSGSDTEKKVA
EDGNASGPKIPPRPHGNRLESFRQQFHHLRPISRRFGDTHGLLSTWRRIFDQHLVNSMSR
LEAPPEPSVSETAQHASRLGRMTTRLRARRLQREAENPTSVVSSAPDSGQPGNNTSDLPR
RSSSPFHAEGMDLLRHIAFAGLEDSERFATAVSELRRIARPSPYGASTSSNPPNPEPVDG
THIASALAADQASNSSTMAVIQEDAAFTESAGEPSNAGSSRSLRRRRGSDALGSLDVDGG
DLHQNKRRRLN
NT seq 1656 nt   +upstreamnt  +downstreamnt
atggccgccgatgacgcggcgcggagcagcagacggatggatctgaacctctacctcggc
ctcccccgcgccccgcgcgcccgccgccccgatctcggctccgacctcgcgctcggcacc
ccgatgctgtcttcgtcgtctccatcgtcctcggctgcctccgcggacgcgccgccgctg
gagacggatccgctgcacccgccctactcgccgacccgcgccgacctggtgcgcccgccg
accccggcgcacgagccctacaacccgttcgcgcccgaggcgcacccgccctacgtgccc
ccgccaccactgcctgttccaggggctttacctgtgctcgctgatgagcttgagtttggt
tttcccgacgcgcacctcggtgtggtcgagcgcttagaccggccatcgtcgtcgactgca
tcctctcccttccgcccggatcgtgccgagcgctaccgccgcttcatgtccttgggcggg
tctcgctacttccggccaagacggttccggtccgaccttccacctctcagctcagaggct
cctagcctggagaatgatgctgcagcgcaaccacctgaacgtgaagagcctgtccatgat
accgtggaggagaacaaggtggttaccgatggtgcagttgtgggtgtctcagaggacgat
ggaacagagcatggtaagagtgccgcaatgttcgagtgtaatatctgttttgaaatggct
gaagaaccagtggttacctcctgcggccatctcttctgctggccttgtttatatcagtgg
ttgcatgttcactccagccataaggagtgccctgtctgcaaaggagaggttactgaaggg
aacatcactcctatctatgggagagggaattcaggttcagatactgagaagaaggttgca
gaggatggcaacgcatctggccccaagattccaccaaggccacatgggaatcggctagag
agtttccggcaacagttccaccatttgcggcccatatctagaaggtttggtgacacacat
gggcttttgtctacgtggaggcgcatttttgatcagcatttggtgaatagcatgagtaga
cttgaagcgcctcctgaaccatctgtctcggaaactgctcagcatgcaagccgtttgggc
cgaatgactactaggttgagagcgaggaggttgcaaagggaagcggaaaaccctacatcc
gttgtttcatctgcaccagatagtgggcagcctggaaacaatacatccgatctgccaagg
cgctcttcaagcccatttcacgcagaagggatggatttattgcgacacattgccttcgct
ggtcttgaagactcagaaaggtttgcgactgctgtcagtgaacttaggcgaattgctagg
ccaagcccctatggggcatcaacttcatcaaacccaccaaatcctgagcctgttgatgga
actcatattgcctcggcactggctgcagatcaagcttctaattcaagcaccatggctgtg
attcaggaagatgcggcttttactgaaagtgctggagaacctagtaatgcagggtcttca
agatccctgagaagaagaagaggaagtgatgccttaggttctttggatgtggatggtggg
gacctacatcagaataagagaaggcggctgaactaa

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