Sorghum bicolor (sorghum): 8077394
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Entry
8077394 CDS
T01086
Name
(RefSeq) probable sarcosine oxidase
KO
K00306
sarcosine oxidase / L-pipecolate oxidase [EC:
1.5.3.1
1.5.3.7
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00260
Glycine, serine and threonine metabolism
sbi00310
Lysine degradation
sbi01100
Metabolic pathways
sbi04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
8077394
00310 Lysine degradation
8077394
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
8077394
Enzymes [BR:
sbi01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
8077394
1.5.3.7 L-pipecolate oxidase
8077394
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Gene cluster
GFIT
Motif
Pfam:
DAO
HI0933_like
FAD_oxidored
NAD_binding_8
Pyr_redox_2
Amino_oxidase
GIDA
FAD_binding_3
3HCDH_N
FAD_binding_2
Pyr_redox
Motif
Other DBs
NCBI-GeneID:
8077394
NCBI-ProteinID:
XP_002459139
UniProt:
C5XIL7
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Position
3:complement(73613622..73615397)
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AA seq
419 aa
AA seq
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MAGAGAPAAPQAADRFDVIVVGAGIMGSCTAHAAASRGSRVLLLERFDLLHPLGSSHGDS
RIIRDAYEQPRYVRMVCLARRLWAAAEAESGYRVLTPTPHLSMGPRSSASLAAALANIGA
EEVLADDLGGRWGGAFAFTVPDPSDEWVTALSDHGGVLSATKAVAMFQSLAVAKGAAVRD
NTEVVGIEKGPGPEGGVVVRTRDGQAFRGAKCVVTVGAWAAKLLGSISGGVDLPIKPLHT
LHLYWRVKPGQEQSLSASAGFPTFSSYGDPPVYGTPSLEVPGLIKISCDGGPPCDPDARD
WLAGDPEVTDRVARWIQEAMPGHVDASGGPVIRQSCMCSMTPDFDFVMDFLGGELGRDVV
VGVGFSGHGFKMGPAVGKILAEMAIDGDSPTAAEADLDLGFFRIGRFDGNPVGNANKDQ
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgccggtgcacccgcagctccccaggccgccgaccgcttcgacgtcatcgtg
gtgggcgctggcatcatgggcagctgcacggcgcacgcggcggcgtcccggggctcccgc
gtcctgctgctggagcgcttcgacctgctccatccgctgggatcctcgcacggcgactcc
cgcatcatccgcgacgcctacgagcagccgcgctacgtccgcatggtgtgcctcgcccgc
cgcctctgggccgccgccgaggccgagtcgggctaccgcgtgctcaccccgacgccgcac
ctctccatgggcccgcgctccagcgcctccctcgccgccgccctcgccaacatcggcgcc
gaggaggtactggccgacgacctcggcggcaggtggggcggcgccttcgccttcaccgtc
ccggacccgtccgacgagtgggtcaccgcgctcagcgaccacggcggcgtgctcagcgcc
accaaggccgtggccatgttccagtcgctcgccgtcgcgaaaggcgccgcggtcagggac
aacaccgaggtcgtcggcatcgaaaagggaccgggacccgagggcggcgtcgtggtgagg
acccgcgacggccaggcgttccgcggcgccaagtgcgtcgtcacggtgggcgcgtgggcg
gccaagctgctcggctccatctccggcggcgtggacctccccatcaagccgctgcacacg
ctccacctctactggcgcgtgaagcccggccaggagcagagcctctcggcgagcgccggg
ttcccgaccttctccagctacggcgacccgcccgtgtacggcacgccgtcgctggaggtc
ccggggctcatcaagatcagctgcgacggtggcccgccgtgcgacccggacgcgcgcgac
tggctggccggagacccggaggtcacggaccgggtggccaggtggatccaggaggccatg
ccgggccacgtcgacgcctccggcgggccggtcatccggcagtcgtgcatgtgctccatg
acgcccgacttcgacttcgtcatggacttcctcggcggggagctcgggcgggacgtggtg
gtcggtgtcgggttctcggggcatggattcaagatgggcccggccgtggggaagatcctg
gcggagatggccattgatggcgactccccgacggcggcagaggccgacctcgacctcggc
ttcttccggatcggccgcttcgatgggaacccagtgggaaatgccaacaaggatcagtag
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