Sorghum bicolor (sorghum): 8078919
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Entry
8078919 CDS
T01086
Name
(RefSeq) alpha-amylase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00500
Starch and sucrose metabolism
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
8078919
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
8078919
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
Glyco_hydro_70
AMT4_dom_C
Motif
Other DBs
NCBI-GeneID:
8078919
NCBI-ProteinID:
XP_002454601
UniProt:
A0A921R876
C5XSU8
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All DBs
Position
4:complement(64636503..64638327)
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AA seq
428 aa
AA seq
DB search
MANKCLPFALFIVLLGLSSNLAAGQILFQGFNWESWKQNGGWYNFMMGKVDDIAEAGITH
VWLPPASHSLAEQGYLPGRLYDLDASKYGNEAQLKSLIEAFHDKGVKVIADIVINHRTAE
HEDGRGIYCLFEGGTPDSRLDWGPHMICSDDRTYSDGTGNPDTGADFGGAPDIDHLNPRV
QRELIGWLNWLKTDIGFDAWRLDFAKGYSADVAKVYIDNTEPCFAVAEIWTSLAYGGDGK
PFYDQNAHRQELVNWLDRVGGKASPATTFDFTTKGILNVAVDGELWRLRGADGKAPGLIG
WWPAKAVTFVDNHDTGSTQHMWPFPADKVMQGYAYILTHPGNPSIFYDHFFDWGLKNEIA
HLVSIRDRHGIQADSELRIIEADADLYLAEIDGKVIVKIGSRYDCDHLIPEGFQVVVHGD
GYAVWEKN
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaagtgcttgcctttcgccctgttcatcgtccttctgggtctgtcgtccaat
ttggcagcagggcagatcctgttccagggcttcaactgggagtcatggaagcagaacgga
ggatggtacaacttcatgatgggcaaggtggacgacatcgccgaggccggcatcacccac
gtctggctcccaccggcgtcgcactctctcgccgagcaaggttacctgccaggacgcctg
tacgatcttgacgcgtccaagtacggcaacgaggcgcagctcaagtccctgatcgaggcg
ttccacgacaagggcgtcaaggtcatcgccgacatcgtcatcaaccaccgcacggcggag
cacgaggacggccgcggcatctactgcctcttcgagggcggcacgccggactcccgcctc
gactggggcccccacatgatctgcagcgacgacaggacctactctgatggaacgggcaac
cccgacaccggcgcggacttcggcggcgcaccggacatcgaccacctgaacccgcgcgtc
cagcgcgagctcatcggctggctcaactggctcaagacggacatcggcttcgacgcgtgg
cgcctcgatttcgccaagggctactccgccgacgtcgccaaggtttacatcgacaacacc
gagccctgcttcgccgtcgccgagatatggacctcgctggcctacggcggcgacggcaag
ccgttctacgaccagaacgcgcaccggcaggagctggtgaactggctggaccgtgtgggc
ggcaaggccagcccggccacgacgttcgacttcaccaccaagggcatcctcaacgtcgcc
gtcgatggcgagctgtggcggctgcgcggcgccgacggcaaggcgcccggcttgatcggg
tggtggccggccaaggccgtcacgttcgtcgacaaccacgacaccggctccacgcagcac
atgtggccattccccgccgacaaggtcatgcagggctacgcctacatcctcacgcacccc
gggaacccatccatcttctacgatcatttcttcgactggggcctgaagaacgagatcgcg
cacctggtgtccatcagggaccgccacgggatccaggcggacagtgagctgcgcatcatc
gaggccgacgccgacctgtacctcgctgagatcgacggcaaggtcatcgtcaagattgga
tcaagatacgattgtgaccacctcatcccagaaggcttccaggtcgtggtgcacggagat
ggctatgccgtctgggagaaaaactga
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