Sorghum bicolor (sorghum): 8079375
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Entry
8079375 CDS
T01086
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 36
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbi03009
]
8079375
Enzymes [BR:
sbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
8079375
Ribosome biogenesis [BR:
sbi03009
]
Eukaryotic type
90S particles
Helicases
8079375
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_30
Motif
Other DBs
NCBI-GeneID:
8079375
NCBI-ProteinID:
XP_002463240
UniProt:
A0A921UW40
C5X389
LinkDB
All DBs
Position
2:complement(74165340..74169224)
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AA seq
502 aa
AA seq
DB search
MEVDGGAQPFRLFSNRGKSKPRLKLEPQVQPQPQPEPEPPSSEPAAAEADHPPSPTIVTE
TSQADDVEAASGAAPATFADLGLSQWLVDACDALGMRRPTAVQRRCIPRALAGEDVLGIA
ETGSGKTAAFALPILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIG
GFDSLAQAKGLSRRPHVVVATPGRIATLVKDDPDLAKVFARTKFLVLDEADRVLDVNFEE
ELRVIFGCLPKKRQTFLFSATMSDNLRSLLELSGNKSYFFEAYEGFKTVETLKQQYIHVP
PQGKELHLWYLLSIMKEKKEDPIRSAIVFVSKCNVCQYLDLLLEELGYPAVALNSHKSQA
QRLLALNRFKSGQVPILISTDVGSRGLDIQTVDLVINYDMPMSPRDYIHRVGRTARASRG
GLAISFVTQKDICLLHEIEDVVGKQLEAYECNDKEVTKDITKVFKARRLAKMRSRDEGHD
EKVEARKEQKKRDRARKRKHED
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgatggcggggcacagcctttccgcctattctccaacaggggcaagtccaaa
cccaggctcaagctcgagcctcaggtgcaaccccagccccagccggaaccggaaccccca
agctctgaacccgccgccgccgaggccgaccaccccccgtctcccaccatcgtgaccgag
accagccaggccgatgacgtcgaggccgcgtccggcgcggcgccggcgaccttcgcggac
ctcggcctgtcgcagtggctggtggacgcgtgcgacgccctgggcatgcggcgccccacg
gcggtgcagcgccggtgcatcccgcgcgcgctcgcgggggaggacgtgctggggatcgcc
gagacggggagcggcaagacggccgcgttcgcgctgcccatcctgcaccgcctcggggag
gacccctacggcgtggccgcgctcgcgctcgcccccacgcgcgagctcgcggcgcagctc
gccgagcagttccgcgcgctcggggcgccgctcggactcaggtgcctcgcggccatcgga
ggcttcgactcgctcgcgcaggccaaggggctctcgcgtcgcccccatgtcgtcgtcgcc
accccaggccgcattgccacgctcgtcaaagacgatcctgaccttgccaaagtattcgct
cgaaccaagtttcttgtgttggacgaggcggatagagttctagatgttaattttgaagag
gaacttcgtgtcatatttggctgtttaccaaagaaacggcaaaccttcctgttttcagca
acgatgtcagacaatctgagatcattgcttgaactttccggcaacaaatcatactttttt
gaagcatatgaagggttcaagacagtagagaccttaaagcaacaatacattcatgtccct
cctcaggggaaagagctccatctttggtatcttctgtcaattatgaaggaaaaaaaggaa
gaccctatccgttcagccattgtatttgtctcaaaatgcaatgtctgccaatatttagat
ctgctgctggaagagcttggttatcctgctgttgctttgaactctcacaagtctcaggca
caacggctcttagcacttaaccggtttaaatccggccaggttcccatattgatttccact
gatgtgggcagtcgtgggttggatatccaaacagttgatctagttatcaactatgacatg
ccaatgtctccacgtgattacatccaccgggttggacgaactgcaagagcttcaagggga
gggcttgctataagctttgttacacagaaagatatatgtcttttgcatgagatagaagat
gttgtggggaagcagttggaggcctatgagtgcaatgataaagaagttactaaagatatt
acaaaggtgttcaaagcaagacgtctggcgaagatgaggagcagggacgagggacacgat
gagaaagtagaagccagaaaagagcagaagaaaagagatcgggcaagaaagaggaaacat
gaagactga
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