Sorghum bicolor (sorghum): 8080164
Help
Entry
8080164 CDS
T01086
Name
(RefSeq) probable ion channel CASTOR isoform X2
KO
K21866
ion channel POLLUX/CASTOR
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbi02000
]
8080164
Transporters [BR:
sbi02000
]
Other transporters
Pores ion channels [TC:
1
]
8080164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Castor_Poll_mid
TrkA_C
DUF2637
Motif
Other DBs
NCBI-GeneID:
8080164
NCBI-ProteinID:
XP_002466116
UniProt:
C5WT06
LinkDB
All DBs
Position
1:complement(1441612..1449175)
Genome browser
AA seq
894 aa
AA seq
DB search
MPLDPDSSSPPPAPPHRDWFFPPAPPFLPSSRARTPRTPFPSTYRSSRPYSAYSLADRRP
PTTPRSRSRSPHPPPEQQQLTPQPQPPPSAPRRRDPRYAGVRREDVRTAASEQAAAPKAA
PVHGRKPAASAIVPRWSGVLSAAVILLCLASLLRRNFSLHDQVYHLQEQLVVATAKLQSC
IVDSSLDTSSINMFYQDANSTTQNRSLKYLSLLISLSVLYAPLLILKYVDLVSKIRSSRD
SEEVPINKRFAYRVDIFLSLHPYAKPLVLLVATLLLIALGGLALYGVTDDSLSDCLWLSW
TFVADSGNHANAEGFGPKLVSVSISIGGMLVFAMMLGLVTDSISEKFDSLRKGRSEVIEQ
SHTLILGWSDKLGSLLNQIAIANESLGGGTIVVMAERDKEEMEADIAKMEFDLKGTAVIC
RSGSPLILADLKKVSVSKARAIVVLAEEGNADQSDARALRTVLSLTGVKEGLSGHIVVEL
SDLDNEVLVKLVGGDLVETVVAHDVIGRLMIQCARQPGLAQIWEDILGFENCEFYIKRWP
KLDGMRFEDVLISFPDAVPCGIKVASYGGKIILNPDDCYVLQEGDEVIVIAEDDDTYAPA
PLPKVKEAVYIDIVHPERKPQKILLCGWRRDIDDMIAVLDAFLAPGSELWMFNDVPEVDR
ERKLIDGGLDFSRLDNITLVHREGNAVIRRHLESLPLESFDSILILADESVEDSAIQADS
RSLATLLLIRDIQAKRLPYKESLVSHVSRGTFSEGSWIGEMQQASDKSVIISEILDPRTK
NLLSMSKISDYVLSNELVSMALAMVAEDRQINNVLEELFAEQGNEMQIRPSDLYLREEEE
LNFFEVILRARQRKEIVIGYRLEAAERAIINPTDKVSRRRWSPKDVFVVISEKE
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgcccctggaccccgactcctcgtcgccaccgccggcgccgccgcaccgggactggttc
ttcccgccggcgccgccgttcctcccttcctcccgggcccggacccccaggacgcccttt
ccctccacctaccgctcctccaggccctactcagcttactccctcgctgaccgccgcccg
cctactaccccacgctcccgctcccgctctccgcacccaccgccggagcagcagcagctg
acgccgcagccgcagcctcctccgtccgcgccgcgccgccgtgacccccggtacgccggc
gtccgccgcgaggatgtccgtacggctgcctccgagcaagcggcggccccgaaggccgcg
ccggtgcacgggaggaagcccgcggcgtcggcgatcgttccacggtggtcgggggtgctc
tcagcggcggttattttactgtgcctggcctcccttctccgtaggaacttctcgttgcac
gatcaggtttaccatctgcaggagcaactggttgtcgctactgcaaaacttcagtcatgc
attgtagactcctcactcgatacgagcagcattaatatgttctatcaggatgctaacagt
accacgcagaacagaagccttaagtacctttccctgcttatctcgctttcggtactatac
gcaccactcctcattctcaagtatgtggaccttgtgtcaaagataaggagctcacgtgac
tctgaagaagttcccataaacaagcggtttgcgtacagagtcgatatatttttgtcactt
catccgtatgctaaaccattggtcctacttgttgctacgttgttactaattgctcttggt
gggctggctctgtatggtgtgactgatgatagcttatctgattgtctttggctgtcatgg
accttcgttgctgactcggggaaccatgccaatgctgagggttttggacccaagctggtt
tcagtttcaattagtattggtggaatgttggtttttgccatgatgcttggtcttgtcact
gattcaatctctgagaagtttgattctttgaggaaaggaagaagtgaagtcatagagcag
agccacactctaattcttggatggagcgataagctgggatctttgctgaaccaaattgcc
attgctaatgaaagcttgggaggtgggaccattgtagtgatggctgagagagacaaagag
gaaatggaagcagacattgctaaaatggagtttgacttgaaaggaacagctgtaatatgt
agaagtggaagccctctgatactcgctgacttgaaaaaggtctcagtttcaaaggcgcga
gcaattgttgttcttgctgaagaaggaaacgctgaccagagtgatgcacgggcactgcgg
acagtcttgagtttgactggagttaaagagggactaagtggtcacatagtagttgagctt
agtgatctcgacaatgaagttctagtcaaacttgttggtggagatcttgtggaaacagtt
gtcgcgcatgatgtgattggacgattgatgatacagtgtgcacgtcagccaggccttgct
cagatatgggaagatattcttggttttgagaactgtgaattctacattaagagatggcct
aagttggatggaatgcgatttgaagatgtgctgattagctttcctgatgctgttccatgt
ggcataaaagtggcatcttatgggggcaagattattttaaaccctgatgattgttatgtt
ttgcaagagggtgatgaggtgatagtaattgcagaggatgatgatacatatgccccagca
ccattgcccaaggttaaagaggctgtttacatagacattgttcatcctgaaagaaagcct
cagaagattcttctttgtggatggcgacgggatatagatgatatgattgcggtacttgat
gctttccttgcgccaggatcagagttgtggatgtttaatgatgtccctgaggttgacaga
gaaagaaagctgattgatggaggtctggacttcagtcgcctcgataatattactttggtg
catcgtgaaggaaatgctgttattcgccgtcacctggagagccttcctttagaatcattc
gattctatcctgattttggcagatgaatctgtagaagattcagcaatccaagctgactcg
aggtcacttgcaacgttactgctgatcagagatattcaggcaaaacgtcttccatacaag
gaatcattggtttcacatgtttcccggggaaccttttctgaaggttcttggataggggag
atgcaacaagcatctgacaaatctgtcataatcagtgaaattttggaccccaggacaaaa
aatttgttgtcaatgtcaaaaattagtgactatgttctttcaaatgaactagtgagcatg
gcattggcaatggtcgcagaggatcgacagataaataatgtcttggaggagctcttcgcc
gaacagggaaatgaaatgcaaatacgaccttccgatctttaccttagagaagaagaggag
ttaaatttctttgaggtcattctgcgagctagacagaggaaagagattgtcattgggtac
cgtcttgaggcagctgagcgtgccataatcaatccaacagacaaagtttcaaggcgaaga
tggtcacccaaggatgtttttgttgttatatctgagaaagaatga
DBGET
integrated database retrieval system
