Sorghum bicolor (sorghum): 8080306
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Entry
8080306 CDS
T01086
Name
(RefSeq) increased DNA methylation 1 isoform X1
Organism
sbi
Sorghum bicolor (sorghum)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TDBD
PHD
Acetyltransf_10
PHD_2
Acetyltransf_1
Acetyltransf_7
Acetyltransf_9
C1_1
Motif
Other DBs
NCBI-GeneID:
8080306
NCBI-ProteinID:
XP_021318176
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All DBs
Position
6:complement(45293591..45301443)
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AA seq
1378 aa
AA seq
DB search
MDGKGLFVEIGMKEEDIATMLFGKKVAELAEDAFDGSKEERQIFEGVFCLTNVKGLNDHH
HEGTGHTVDAGKVVTRSSKPSSSAHNYKTAHCRIVESFTAGNLSSYRVSCLGADEKSHRA
MHSPDAVHFELAVQCTPPPPPDRVYTRRVVNRMSERARICSAMDLESIDISNFSRRRDGR
GHGELWNHLRLHAQLLMVDAGWKIEGKERGNKSTVKVDHVYVAPDNVMTRLFSLPRAWKY
FGQWLLVTTPCVNGNESIGYGKEWSNIHEFVYDLKNTLLCLQYEVQRTKPALSFLSQWQL
LDPFVAVVCIDKKVGALKDGVALKAVNSTATFLNHSECKLLNAKNSSRSLGVNPRSKYTN
PHLSSCKKSLLPLLSESDYQPGKEGNPMPNEEASLFCTNKTSEEADRRSLCMSEMNERGI
RSTAHRIVMGLHDATAFLGSSQTCSGRKRKFPCIMSKEDHQAEDKSKEDSSALSHLVENV
QKHDVSSHGYETTEIDEMYLGENLLFAPEIDDMLLGTTDDINNGQHDDAAVSEPQSADND
GSGPSGASSLPPEKDAYMGAKKDCINNGYHDPPVVSEFQMANKDAECEPSGTFSLLSEKG
KDLEANKTTLEDPAKTGQLSSEASGSTLRISEPQVLFVSPQDGTLSFMNNNMNNQELLSF
LNASPDTMDTAMQMDSNSLVYEASLIQGFLYLDNEGSPICWTVMNPEPPRRLICATAPEP
NPKTSKQYVEMRLENDASTSEHKKGKKWPDKAADIQDSVRYPLNLVLANKNDKDQGEESS
EPSEQLISKEPHKRDIKRQKRTWSRTCKFDDDDLLMTAVIYKLTARYRNSFQRKLRNKLG
FKRLPRYRWENEDKGVRKKFPGGARTVLNKLLEMGIVARVNILQCRGPGGKIVLKDGNIT
TSGIRCRCCGTTFTMSKFKCHAGLRQEVPSLNLFLGTGKSYSLCLLQAWSIEQKVRKERV
KDTMSLQADQNDDTCGSCGDGGELICCDNCPASYHQACLPCQDIPDGNWYCSSCLCNICG
EVITSKELRTSLPALECSQCERQYHVKCVSAKVSCNEDGPGTWFCGRKCQQIYMIFRSRV
GVPDHVDNDLSCTILRNNGDKKVRTAGEIALMAECNMKLMIALSIMEECFLPILDPRTGI
DIIPSILYNWRSDFIHFNHKGFYTVVLENDDSMVSVASIRLHGTIVAEMPLVATSTENRQ
QGMCRRLMDYIEEMLKSLKVEMLLLSAIPHLVETWTSTFGFREIDDSDKKRLSMVRLAAV
PGTVLLKKNLCECSGVEDTDDAVGCMSRRGQSSSSSPVTAAAYDHRHQAPSLVAVSEDVA
EAEHQSSPVSEVSASVCAAEMESLVALVGALTVASPCGCDDVNRSACSLLKCDLSSSL
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggatgggaaaggcttgttcgtggagatagggatgaaggaggaggacattgccacaatg
ctgtttgggaagaaagttgccgagctggcagaagatgcatttgatggttccaaggaagaa
agacagatctttgagggtgtcttctgcctaacaaacgttaagggattaaatgatcatcat
catgaaggcactggacatactgtggatgcaggcaaagtggtgacaaggtctagcaaacca
tcgagttctgcccacaattacaagacagcacactgtcgcatagtagagtccttcactgct
ggcaacttatcaagctatcgtgtctcctgtcttggtgctgatgagaagtctcaccgagca
atgcattctcctgatgctgtccattttgagcttgcggtacagtgtactcctccccctccc
cctgatcgggtctacactcgtagggtggtaaatcgcatgagcgagagggcaagaatttgc
agtgcaatggatttggagagcatcgacatttccaatttcagtcgtcggagggatggtcgt
ggccatggagagctttggaaccatcttcgtctgcatgcacagcttctgatggtggatgcc
gggtggaagattgaaggcaaggaaagaggcaacaagagtacggttaaggttgatcatgtt
tatgtggcaccagacaatgtgatgacacgcctgttttctcttcccagagcatggaaatac
tttggccagtggttgcttgtgacaacaccctgcgtcaatggaaatgagtcaattggctac
ggaaaggagtggtcgaacatacatgaatttgtgtatgatttgaagaacacactgctatgc
ttacagtatgaggtccaacgtacgaagccagcactatctttcctctcccagtggcagctc
cttgatcctttcgtggctgttgtttgcattgataagaaggttggagctcttaaagatgga
gtggcactgaaagctgttaacagcactgcaactttcctcaatcacagtgagtgtaagctg
ttgaatgccaagaattcaagtaggtcacttggggtcaaccccagaagtaaatatacgaat
ccacatctcagctcctgcaaaaaaagtcttctgccgcttctctctgaatctgattatcag
cctggtaaggaagggaatcctatgcctaatgaagaagcttctctattttgtacgaacaag
actagcgaagaagctgatcgacggtcattgtgtatgtcagaaatgaatgaaagaggcata
agaagcacagctcatcgcatagttatgggtcttcatgacgcaacagcttttcttggctca
agtcaaacttgttccggcaggaaaaggaaatttccgtgcatcatgtctaaagaggatcat
caagctgaagacaagtctaaagaggattcatctgcattaagtcatctggttgaaaatgtt
caaaaacatgatgttagctctcatggctatgaaaccacagaaattgatgagatgtacctt
ggagagaatttactgtttgctcccgagattgatgatatgctacttggaactacagatgat
atcaacaatggacagcatgatgatgcagctgtctctgagccccaatcggcagataatgat
gggagtggaccttctggtgcatcatcactaccaccagagaaagatgcatacatgggagct
aaaaaggattgtattaacaatggctatcatgatcctccggttgtctctgagttccaaatg
gctaataaggatgcagaatgtgaaccttctggcacattctcgctactatcagaaaagggt
aaagatttggaagctaataaaacgaccttggaagatccagcaaaaacaggacaattatca
tctgaagctagtggcagcactttgaggatctcagagccacaagtattgtttgtgtcccca
caagatgggactctgtctttcatgaacaataatatgaacaaccaagagttgttgagcttc
ctgaatgcttcccctgacaccatggataccgcaatgcagatggactctaattcattggtt
tatgaggcaagcttgatccagggtttcttgtaccttgacaatgagggttctccaatttgt
tggacagtaatgaaccctgaacctcctaggcgcttgatatgtgccactgctccggaacca
aacccgaagacgtcgaaacagtatgttgaaatgaggttggagaatgatgcatcaacgtct
gaacataagaaggggaaaaaatggcccgataaggctgcagatatccaagacagtgttaga
tatcctttgaatctagtgcttgcgaacaaaaatgacaaggaccaaggtgaggaaagcagt
gaaccttcagaacaactcatatccaaagaaccacacaaaagggacatcaaaaggcaaaag
agaacatggtctcgcacatgcaagtttgatgatgatgaccttctgatgacagctgtaata
tataagctgacagcacgttacaggaactcttttcaacggaagctcagaaataaactcggt
ttcaagcgtcttccaagatatcgctgggagaatgaagataaaggtgtcaggaagaagttt
cctggaggtgcaaggacggtgctgaacaagttacttgaaatgggcattgttgctagagtg
aacattcttcaatgtcgaggtccaggaggcaaaattgtgttaaaggatgggaacataact
acgagtggcattcgatgccgatgctgtggcaccacattcacaatgtccaagtttaaatgt
catgctggtctcaggcaagaagtcccatctctgaatcttttcttgggtacaggcaaatca
tacagtctttgtctgcttcaagcatggtctatagagcagaaggtgaggaaagagcgtgta
aaagatacaatgtcccttcaagcagatcaaaatgatgatacctgtggatcatgtggcgat
ggtggtgaactgatatgctgtgacaattgtcctgctagttaccatcaagcctgcttgcct
tgtcaggatattccagatggcaactggtactgctctagctgcctttgcaacatttgtggg
gaagtaatcacttcaaaggagctcagaacttcccttcctgctttagaatgctcacagtgc
gaacgccaataccatgtaaaatgcgtatctgccaaagtttcgtgcaatgaggatggacct
ggtacctggttttgtggaagaaaatgccagcagatttatatgatctttcgctctcgtgtt
ggagtgcctgatcacgtggacaatgatctgtcttgcaccattcttcgtaacaatggtgat
aaaaaggttcgtacggcaggggagattgctctcatggctgaatgcaacatgaaacttatg
attgccctgagtattatggaagaatgtttcctgcctattctagatcccaggacagggata
gatattattccttctatattatataactggaggtctgacttcatacatttcaatcacaag
ggattctatacagtagtcttggaaaatgatgacagcatggtatctgttgcctccataagg
ttgcatggtacaattgtagcagagatgcctctagttgcaacttccacagagaatcgtcag
caggggatgtgcaggcgcctcatggattacattgaggagatgctgaaatctctgaaggtg
gagatgctactcctatcagcgattccgcacctagtggagacatggacctcaacatttggg
ttcagagagatagacgattcagacaagaagaggctaagtatggtgaggctggccgcagtt
ccaggaaccgtcctactgaagaagaacctgtgtgaatgttcaggcgtggaagacaccgat
gacgcagtgggttgcatgagccgccgcggtcagtcgtcctcgtcgtcgccggtgacagca
gcagcttatgatcatcgtcaccaggcgccgtctcttgttgctgtttctgaagatgtggcc
gaggccgagcatcagtcgtcgccggtatctgaggtttccgcgtcggtttgcgcggcggaa
atggaaagcctcgttgctctggtgggagctctgacggtcgcttcaccctgtggctgtgat
gatgtgaaccggtctgcctgtagccttcttaagtgtgacttgagtagcagtctgtaa
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