Sorghum bicolor (sorghum): 8081062
Help
Entry
8081062 CDS
T01086
Name
(RefSeq) nuclear poly(A) polymerase 3
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8081062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8081062
Enzymes [BR:
sbi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
8081062
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
8081062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
NTP_transf_2
PAP_RNA-bind
Polbeta
Motif
Other DBs
NCBI-GeneID:
8081062
NCBI-ProteinID:
XP_021306644
LinkDB
All DBs
Position
1:67880478..67886622
Genome browser
AA seq
535 aa
AA seq
DB search
MALDLAVGGSAARRAETQTLAPVLLMGPPPPPPIPPTTGVYLPGPPPPGALLSRPIPMAL
PREVIVYMDECRSRSLLKFISDAGIVPSLEDERRRERVVRELGKIVMEWAKRVAYEQGKQ
HWITSATVLTFGSYALGAYGPESDIDVLCIGPYIATLQHHFFVVLRQMLEGRPEVSELQS
IEGAKVPLMRFKFNGILVDFPYVQLPFINAAEAMHAFDPHVLENVDGPSWRCLSGVRANR
QIIQLVPNMKKFQYLLRCLKLWARKRGLHCHLLGFFAGIHLAILAAYVCRRHPNASINTL
LSLFFDIFAHWPWPLPVSLLDPPVLCRGPDGCSLMPIMLPCNPPEFCSSSTTESTFSKIK
EELRRGYALTKDTRSTDFDWSWLFASFPYGARYKCFLRIVLSAPLDEELRDWVGWVKSRF
RNLLLKLESLGVYCDPDSSEQVDHTITEPNVVFFWGLVFTRNIQICTSSLKEDFMKSVCN
NIYGKEKCAHSDITMAIVGPPQLPKSIFDLSVYSEKLPQHMMGHQLMKQRYNAVS
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcactggacctcgccgtcgggggctcggcggctcgcagggccgagacccaaacccta
gcgcccgtgctgctcatgggcccgccgcctccaccgccgatcccaccgacgacgggggtg
tacctcccggggcccccgcccccgggggcgctcctgtcgcgcccgatccccatggcgctc
ccgcgcgaggtcatcgtctacatggacgagtgtcggagccgctccctcctcaagttcatt
tccgacgcggggattgtgccttcgctagaggacgaacggaggagggagcgggtagtacgc
gagctcggcaagatagtgatggagtgggcaaagagggtggcctacgagcagggcaaacag
cactggatcacatcagccacggtgttgacctttggctcctatgccttaggggcatatgga
cctgaatctgatattgatgtcctctgtattggtccttatattgcaacactgcaacaccat
ttttttgttgtcctgcgacaaatgcttgaagggaggccagaagtatcagaattgcagtca
attgaaggagctaaggttccattgatgcgttttaaattcaatgggattttagttgacttt
ccttatgttcaactcccatttatcaatgctgcagaggctatgcatgcatttgatccccat
gtgctagagaatgtggatgggccaagctggagatgtctatctggagttcgtgctaataga
caaatcattcaattagttcctaatatgaagaaatttcaatatctgttgcggtgcctcaaa
ctatgggcgagaaaaagaggacttcattgccatctacttggcttctttgctggaatccat
ttggcgattcttgctgcatatgtttgccgcagacatccgaatgctagtataaatactttg
ttgtctttgttcttcgatatttttgctcactggccttggcctcttccagtgagtttgctg
gatccgccagttctttgtcggggtcctgatgggtgctctctcatgcccataatgttgccc
tgcaatccaccagaattttgctcctctagtacaacagaaagtactttcagcaaaatcaaa
gaagagcttcggcgtggttatgctttgacaaaggataccagaagtactgattttgactgg
agttggctctttgcatcttttccgtatggtgcaagatacaaatgctttctccgcatagtt
ctctctgctccattggacgaagaattgcgtgactgggttggatgggtgaaatcacgattc
cgcaaccttcttcttaagctggagagtcttggcgtttactgtgacccagattcctcggaa
caagttgatcacaccatcactgagccaaatgttgtattcttctggggtctcgtcttcaca
aggaatattcaaatctgtacaagttctctcaaagaagatttcatgaaaagcgtctgcaat
aacatctatggaaaggaaaaatgtgcccattcagacatcacaatggccattgttgggcct
ccccagctgcctaagagtatctttgatctctcagtttactcagaaaagctgccacaacat
atgatggggcaccaactaatgaagcagaggtacaatgcagtgagttag
DBGET
integrated database retrieval system
