Sorghum bicolor (sorghum): 8081179
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Entry
8081179 CDS
T01086
Name
(RefSeq) pentatricopeptide repeat-containing protein At5g03800
Organism
sbi
Sorghum bicolor (sorghum)
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Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
DYW_deaminase
PPR_3
PPR_1
E_motif
Eplus_motif
PPR_long
Motif
Other DBs
NCBI-GeneID:
8081179
NCBI-ProteinID:
XP_002461524
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Position
2:complement(4588935..4592718)
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AA seq
867 aa
AA seq
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MAISTSSASSPAAPLHPTSPSPTFLCFPPAPSAPPPPHGAPPRLPLRAVAAAAADPRAAH
AAAVKSGALGASPDARASNAVMCAYLRAGRLADARDVFDRMPARDAASYSALISGHARLG
GGGAAAAAAELLGRMRLADGLLPTEYTFVGLLTACARRGNPRLGTQVHALVAKSGHASSL
LVANALLGMYVKCGRFGDALRAFDGMDRRDVSSWNAVLAGLVELGRHEEAFELFGEMRAS
GNVRADRFTLSALLAAAGEGFGQPQGEAVHALSLKSGLETDLSVGNALIGFYAEHGASVD
DVVSVFQRMPVKDVISWTGLLNGYMEFGLVDMALDVFERMPQRNFVTYNAVLTGFCQNKE
GVRVTFAKKAGFRGLGLFRQMVEAGLEISDVTVTGVLNACAIAADRKASEQVHAFVIKCG
CVSSPWIDAALIDMCIKCGRSGDAHLLFEQWQHDESFHIAWNSLLLASVRDGEYEKALST
FLQMFRSSGVEFIDEFMLTAVLGVCGSLGFAELGKQMHSFTAKSGLLCARGVGNAIISMY
GKCGELKDAGSFFEGMTCRDLVSWNAMITAHLLHHQGDEILKIWSEMERLMVRPDSITFL
LVISACSHTSSDSTQKCRDLFLTMPSTYGIEPAMEHYAAFVYVLGCWGHFDDAEQLIGGM
PLKPGALVWRSLLDSCSKHSNMAVRRRAMKHLLALEPQDPSTYVLTSNLLSESARWHSSE
NRRLEMREKGMRKIPARSWTFHGNMVHSFFARDRTHPQSRDIYAGLDVLILECIKAGYEP
DTTFVLHDVEEYQKRHFLMYHSVKLASMYGLLMAGPGQTVRVVKNIRMCGDCHSFLEHAS
AATGKVISVRDSSGFHIFREGKCSCRQ
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggccatctccacctcatccgcctcctcccctgctgccccgctccaccccacctccccg
tcccctaccttcctctgcttcccgcccgcgccgtccgctcctccgcctccccatggggcc
cctccccgcctgcccctccgcgcggtggccgctgccgccgccgacccccgcgccgcgcac
gcggcggcggttaagtccggcgcccttggcgcctccccggacgcccgcgcctccaacgcc
gtcatgtgcgcgtacctccgcgcgggccgccttgccgacgcgcgggacgtgttcgaccgg
atgcccgcgcgcgacgccgcctcctacagcgcgctcatctcgggccacgcgcgcctcggc
ggcggcggagccgccgccgccgccgcggagctgctcggacgcatgcgcctcgcggacggg
ctgctccccaccgagtacaccttcgtgggcctcctcaccgcgtgcgcccgcaggggcaac
ccgcggctcgggacgcaggtgcacgcgctcgtcgccaagtccggccacgcctcgtcgctc
ctcgtggccaacgcgctcctcggcatgtacgtcaagtgcggccgcttcggggacgcgctg
agggcgttcgacggcatggaccgccgcgacgtctcgtcgtggaatgccgtcctggctggg
ctcgtcgagctggggcggcacgaggaggcgttcgagctgttcggcgagatgcgagcgagc
gggaacgtccgcgccgacaggttcactctgtccgcgctcctcgccgcggccggcgagggg
tttggccagccccagggcgaggcggtgcatgctctgtcgctcaagtcggggctggagacg
gacctgagcgtgggcaatgcgctcattgggttctatgcagagcatggcgcctctgttgat
gatgttgtgagcgtgttccagaggatgccggtgaaggacgtgatttcgtggaccggtttg
ctgaatgggtacatggagtttggtctcgtggacatggcactggatgtgtttgaacggatg
ccgcagaggaacttcgttacatacaatgcggttctcactgggttttgtcagaacaaggaa
ggtgtgcgggtcacgtttgccaagaaggcaggcttccgagggcttggtttgtttaggcaa
atggtggaggctggtttggagatctcagatgtcacggtgacaggcgttctgaatgcttgt
gctattgctgcggataggaaggcgagcgagcaggttcatgcttttgtgatcaagtgtgga
tgcgtgtctagtccgtggattgatgctgcgttgattgatatgtgcatcaaatgtggccga
tctggagatgcgcatctgttatttgagcaatggcagcatgacgagagctttcacattgcc
tggaattctctactgctggctagtgtcagagatggtgagtatgagaaagcactttcgacc
ttccttcagatgtttagaagcagtggtgtagaattcatcgatgagttcatgttgactgct
gtccttggagtatgtggcagtctaggttttgctgaacttggaaagcaaatgcattccttt
actgcgaaatctgggcttctgtgtgctcgtggagttggtaacgcgattatcagtatgtac
ggcaagtgcggggagttgaaagatgccggcagtttttttgaggggatgacttgtcgagat
ttggtgtcatggaatgcaatgatcactgcccatcttcttcatcatcagggggatgagata
ttgaagatatggtctgagatggagagattaatggtcaggcctgattccattacgtttctt
ctggtcatatctgcttgcagtcacacaagctcagactccacacagaaatgcagggatctc
tttctaactatgccaagcacatatggcattgaaccagccatggagcactatgcagccttt
gtttatgtccttggctgctggggccattttgatgacgcagagcagcttataggtggtatg
ccattaaagcctggtgcattagtttggcggtctttgctagacagctgcagcaaacactcc
aacatggctgtgcggagacgagccatgaagcatctgctggcattggagccacaagaccca
tccacgtacgtgctgacttcaaacctgctatccgaatcagcaaggtggcactcctctgag
aacagaaggctggagatgcgtgaaaagggcatgcgcaagatccctgccaggagctggacg
tttcacggcaacatggtccactcatttttcgcacgggatagaacacacccacagtccagg
gacatatacgccggcctggatgtgctgatccttgagtgcataaaggctgggtacgaaccg
gacaccaccttcgtcctgcacgacgtcgaggagtaccagaagaggcactttctgatgtac
cacagcgtgaagttagcgtcaatgtatggccttctgatggcaggccctggacagaccgtc
cgcgtggtcaagaacatccgcatgtgcggggattgccactctttcttggagcatgcctct
gctgccaccggtaaagttatctcagtcagggactcgtctgggttccacattttcagggaa
gggaaatgttcctgtagacagtag
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