Sorghum bicolor (sorghum): 8082316
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Entry
8082316 CDS
T01086
Name
(RefSeq) Fanconi anemia group I protein homolog
KO
K10895
fanconi anemia group I protein
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8082316
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
8082316
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_HD2
FANCI_S4
FANCI_S2
FANCI_HD1
FANCI_S1
Motif
Other DBs
NCBI-GeneID:
8082316
NCBI-ProteinID:
XP_002465301
UniProt:
C5X0Q4
LinkDB
All DBs
Position
1:66576676..66582513
Genome browser
AA seq
1343 aa
AA seq
DB search
MSATTASASQPSSQQPPPPPPNAEAVLRLASRDPSAAVPLLPELPPDDLADILSSLTAAS
PAGHLALLPAILALSPSPSSASTAFAALLSAPSWPSSTLLAVAALIRDLPSAYRTRIPAF
LGKIISLLPSADAQDLPALAYQLLLLASKPLYPRVVLAGLLRFFGGRRGARVRAPPSIAR
QVESTALMNVAFAVKQDPALAREVLAAVKADAAGALSGFAVAVMLFVARVRRFNEGAVSV
LRDAAVVSRRDYRMSRRCKWLPDCLEEEYARATQCVEKGLLKSVDESIVGREHVVPSIVQ
VGFLLLEVSDGDQGEEGGLGEGVMSTEEIGINMLKSLFEIHEMARTEIIEQCKFRILSAK
PQQSAPVLRLLGCLILSHPFPMLEFIAHLKELLDYFSFMNDKISTGLISCVLPLTKFSRD
LKDYIILVVRKAMFKREDMVRIAATNAIIELIIAESRKNEARPFEDSTSQPSSSQQPETH
LEFGRGLFQELSGLLRRCLSHQASVKEILYEGLIRIVTSDPAVSDNVLDFLWPHFQNYYS
EDAECPLKIGSCFKVEHAKLCIVEPLDCLLSCISRILQIKQHSKCERPRDAYWKCFGFAA
SQDNEVGRASSSDLFVKALSSIQKYLRISLTDQRGQSPEAGSLSSSSEVAHCHNFAMLGI
IEVFVDSAASKLEKASDESKEMIEKEILELVNVHSGFEKKMSNGRERIARRRANAGDATD
KHTNEPRENSNASLQKLHGKRGKFADSSLYELSVMCVKQHHADNYNNVSQHPSQTTLDQS
SNLTSFVLKAFLELSKSLASKDSRVFRIKLHEDFKKLWQPIMQLVWCFLLDSIQENGGSK
RNMTQGKKNIECKKDQLYLALTCLKKFLEPSVSGDHSGDVTDFLISLAPPNIEDMMDAVD
LDNNDTTMVEDRSTRNVHMLLNILKMLYVRLLTQSLLRESEAVTELILGISRRVHPEQRH
IIGKWATDLCRNKTTQSPSIAREMVKLAVHLTPAPDDMILVCDVSAELMKLMTSEDDGDS
SDTFHIINCKTKSSLAAVSLQMVESSLTELDWGLGKLKAMLTLGYDSANIDEDQPADEIM
LRLALEKALYSRSTSVVQVLSSFAHMSLKDTQAEHFLKLTAKFYKLLTRMSKSQIAPKGY
TQSVPSLKFQKLAEVTCKMLTAPLYDFVSQQNQQIPRKGNIAKIRRETKCIPDLIYQIED
YEKYLIQLSKRTKVNLLRHAKRSVARDFQIKDKSGEQQEEDPAPDNAAASDNEANKDAGG
PNTPVESYADENASSESEHDEDAGGPNTPVEADADETIRSSIPCGRPVQESESDREEEEI
LARRKRAKTKQIVQDSDEEAEDE
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgaccacggcgtctgccagtcagccctcgtcgcagcaacctccgccgccaccg
cctaatgccgaggccgtcctccgcctcgcctcgcgcgacccctccgccgcggtgcccctc
ctcccggagctcccgcccgatgacctcgctgacatcctctcctcgctcaccgccgcctcc
cccgcgggccacctcgcccttctcccggcaatcctcgcgctctccccctccccttcctcc
gcctccaccgcgttcgccgccctcctctccgcgcccagctggccctcctccacgctcctc
gccgtcgccgcactcatccgcgacctcccgtcggcctaccgcacccgcatccccgccttc
ctcgggaagatcatctccctcctcccaagtgcagatgcccaggacctcccggccctcgcc
taccagctcctcctgctcgcgtccaagccgctctacccgcgcgtcgtcctcgcgggtctc
ctgcgcttcttcggcggccgccgcggcgcccgcgttcgcgcgccgccgtccatcgcgcgg
caggtcgagagcaccgcgctgatgaacgtcgcgttcgcggtcaagcaggaccccgcgctg
gcgagggaggtcctggccgccgtcaaggctgacgccgcgggcgctctcagtggattcgcg
gtggcagtgatgctgttcgtggccagggtacggaggttcaacgagggtgccgtgagtgtg
ctccgggatgcagccgtggtgtcccgccgggattatcgaatgtcgaggcggtgcaaatgg
ttaccggattgtctggaagaggaatatgcacgggccactcaatgtgtcgagaagggatta
ctgaaatctgtcgacgagagcattgttgggagggagcatgttgtgccaagcattgttcag
gtgggttttctcctgttagaagtctcagatggtgatcaaggggaggaaggtggcttaggt
gaaggagtaatgagcaccgaagaaataggcattaatatgctgaagtcgttgtttgagatc
catgaaatggcacgaactgagataattgaacagtgcaagttccggattctctcggcaaag
cctcagcaaagtgcaccagttctcaggttgcttggatgcttgattttgagccatccattt
ccaatgctggaattcattgcacatttgaaggagttgctggattatttttcttttatgaat
gacaagatatcaactggtttgatcagttgtgtcttgccactcacaaagttcagccgtgat
ctgaaggattacataatactggttgtaagaaaggcgatgttcaagagggaggacatggtc
cgaattgctgctacaaatgctataattgagctgataattgcagaaagcaggaaaaatgaa
gcccgtccttttgaagactcaacaagtcagccaagctctagccagcagcctgaaacacat
ctagagtttggtaggggtctctttcaggaactaagtggattgcttcggagatgtctctcg
catcaggccagtgtcaaagagatcttgtatgagggtcttatacgtattgttacctctgat
ccagctgtttctgacaatgtccttgatttcctctggcctcacttccaaaactattactca
gaggatgcagaatgccctcttaaaattggttcatgcttcaaagtagagcatgccaagtta
tgcattgtggaacccttagattgtctgctgtcatgtatctcaagaattctgcaaattaag
caacatagtaaatgtgaacggccacgtgatgcatattggaagtgctttggttttgctgct
tcacaagataatgaggttggacgagcatcatcaagtgatttatttgtgaaagctctatca
agcatccaaaagtatttgaggatatccctcacagaccagagaggacaaagcccagaagca
ggatctctttcttcatcatcggaggttgctcactgtcataactttgctatgcttggaatc
attgaggtttttgttgattctgctgcttcaaaactggagaaagcctctgatgaatcgaag
gaaatgatagaaaaagaaatactggagcttgttaatgtgcacagcggctttgagaaaaaa
atgagcaatggtagggaaaggatagcacggagaagagcgaatgctggtgatgctacagat
aagcacaccaatgaacccagggagaattctaatgcttcattgcagaaacttcatggaaag
aggggtaaatttgcggattcgagtttgtatgaactttcagtaatgtgtgtcaagcagcac
catgctgataactacaacaacgttagtcagcatcctagccaaactacattggaccagagc
tccaatctgacatcttttgtactgaaagcctttcttgaattgtcaaaatcacttgcatca
aaggacagtagggttttcagaataaagctgcatgaagattttaaaaagttatggcagcca
ataatgcagcttgtatggtgttttctgttagattcaattcaagaaaatggtggaagcaag
aggaacatgacccaaggaaagaaaaacattgagtgcaaaaaggatcagttatatttggct
ctgacatgcctaaaaaaattccttgagccaagtgtttcaggagatcactctggtgatgtc
actgattttctaatatctttggctcctccaaatatagaggatatgatggatgctgtggat
cttgacaataatgataccactatggttgaagaccgaagcacaagaaatgtccatatgctt
ttgaacatattgaagatgttatatgttagacttcttacccaatcacttttacgtgaatct
gaggctgtaactgaattgattttgggcatttcaagaagagtgcatcctgaacaaaggcat
attatcggaaaatgggctacagatctatgtagaaacaaaaccacgcaaagtcctagtatt
gcacgagagatggtaaaactagctgtacatcttacaccagctccagatgacatgattctt
gtttgtgacgtgtctgctgagttgatgaaattaatgacctctgaagatgacggagattct
tctgatacatttcatataattaactgtaaaacaaagagttcacttgctgctgtctcactt
caaatggttgagtcatctcttactgaattggattggggtcttggaaagcttaaagcaatg
cttacattaggttatgattctgctaacattgatgaagatcaaccagcagatgaaataatg
ctaaggttggctttggagaaagcactctactcgagatcaacatcagtagttcaagtcctc
tcttcctttgcacatatgagccttaaggatactcaagcagaacactttctgaaactgact
gccaagttctacaagcttttaactcgcatgtcaaagtcccagattgcacctaaaggctac
acacaatcagttccaagcctcaagtttcagaaactggctgaagtaacttgcaagatgctc
accgctcccctttacgactttgtgtctcaacagaatcagcaaatacccagaaagggaaac
attgctaaaattagaagagaaaccaaatgtatccctgatcttatttatcagattgaggat
tatgagaagtatctaatacagttaagcaaacgcactaaggtaaaccttttgagacatgcc
aagcgcagtgtagcacgagacttccagataaaggataaatctggggaacaacaggaagag
gatcccgctccagacaatgctgcagcatctgataatgaggctaataaggacgcagggggt
ccaaacactccagttgaatcatatgctgacgaaaatgcatcatctgaaagtgagcatgat
gaggatgcaggcggtccaaacactccggttgaagcagatgctgatgaaacaattaggtct
agcattccatgtggtagaccagtccaggagtctgaatctgatagagaagaggaagaaata
ttagcacggaggaagagagctaagacaaaacaaatcgtgcaggattctgatgaagaggcg
gaagatgaatag
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