Sorghum bicolor (sorghum): 8083496
Help
Entry
8083496 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC8083496 isoform X1
Organism
sbi
Sorghum bicolor (sorghum)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
8083496
NCBI-ProteinID:
XP_021305779
LinkDB
All DBs
Position
10:54454554..54463528
Genome browser
AA seq
2026 aa
AA seq
DB search
MDPHHQPFGNPHHRRAAHPGNHYLDQQHPGGHHHHHHHHLAGGGGAAAPARSRYDYEYDS
RPIQYPPPDHHHHHHHHPLPRVHQQQPPPPPPSQPLPPPPPPQPHHRHDVPHYAPLPLRP
TPETYSPPPYHNPPPPQQPYHQQRHGDFRPADEIRRIPSHHPHHQQQPHHHHHHHQQPQH
LHQQPQLSWQEADEGRRYAAHQLKPQLQWEEAEEERRYAARQLRVSLSPPGARKRYRCAM
HDSGDRESTSSSGPPPRRQRQQLHPSYSPPPDDSFVDRATSYSCYGSHEGFVAHGDSNGN
RKMPMSMSTMLPGSPRRAPQKMAPTRLSVWHRIEENPSLYTPPSPRKVPKEVHISPSKTK
NSGSASKELSSVISLDCKAKSSDCKGSDDSAGMKKNVAKKTEKVLSSVIVKPSPEDKEKE
RAVNKVTKKPDKVGNSIPGFTSAGVRSAAFPGSGVKKVKKIVIKKIVRKIGAKDKQTSSS
IVSEKDSIDANVNASEKEEADANASEKEEGEITTSSLEKDAISAHNLVSTSDTAGVANSL
EVQKEQDSDLVNLKKNNAASTIASTDTVDTANASRRKHPEKEDYKSFVKSIDGNASPAIE
SIKTFNASGVEHPGKEDDGCFTNSSVKNGTLNCENNNSQQEEEGEILAVSGPVNVANNCP
RILDAVEPHDCEVENMEDNKVPEVLSGNSAVYVNGAKDCTTEVSGSENDRREEGLFLLND
PIRSPSTDEVSMTPSKDNHEKEGMNLIGASEVCAASVGQPEGNPKIAEATVAHGAHKEEG
NLLNSPREKDAASFGSWGTLDTTEVSANEITQEKEWRTPIEPNEATTSAHHVKALSTLEI
NVSENIQKESQMPMDSSAFQTVECAEAPNIVEVVSSKFAQNVACKSPMALNGTNVGTSDN
SLYTEDSNMQVDFHDVKAALSKSDLPLDVVDTDTYALQSSRNTESIIMPSLDDDPMKISS
GAVILNNGVGKSTSSQVAGLTHLHRPHPPPDNNPSSLHSHDSPSVSGNSEHSVRTALTLG
NNMYFSSAESEGQLGEKHNLVDVNQGFDVTMTEFGNVSKRKSESGNGFMNAGSQNWLTLP
LTVSCLDNDAAGSNERLGLEQIVDEGASVCQDHDSMPDIDQRGSIDIFSCQDHSLKLCDI
SMPQADLLATEEGNKDVEDEIVLPGSSVNSVNVLDPYSFRTVDKPIDNLNKRILLSSQSA
DAPGRELASSQVSVDSDHTYHGSSEDPVGVSSTTPDSISSWIEAIVSEAKKEHQSCKSSL
LPISSPDKVSAPKEDSKKALSDSVVNSVVKSPPRVNIASSTVSKVPTKQVALPGSLRAPP
RLNQNARNRTWRRDNASSSNSLLHVSQTSGLPPKLPVKKNSKSQNSYIRKGNALIRNPAT
GNLHSSSLDSQNKSKPVMRRSMNFVRKVDSKDVGHSHISVERPKTPPLPLHTKSISCDVN
ILEPLSQNLQQQVIETEKEDSSGQVNSGADIPSIISSHKSEALDAGKAIYVRPKLNQVVV
AQGQHLCESSNLPLDKVTLLQPSTTSDLYFKKRKNQIILGPSTSDAPSSKDTSQAENIKS
GESKVLMSASSNNNITVAKDRPHKALQTTNTVRSSSHVWTLSGQNPRKKSFVGAIHMKVF
PRILPWKRKIFCQNFRGSYSSLLNTSSIGIMRKLLQTRKRSTIYTVSTDGFSLRKSGVLS
IGGSSLKWSRSLEKHSQKVNEEATQAVAEVERKKREKRKRQSLRNKGRNDRYSASVAANQ
LTNSSRASSEYVRVNKGNQLVRNPKKVIRMLASEKVRWSLHTVRRRLAKKQQYCQFFTRF
GECKKSGGKCPYIHDRAKVAICTKFLNGLCSSTSCKLTHKVLPERMPDCSYFLQGLCTNT
ACPYRHVKVNSNAPVCEDFLKGYCADGDECRKKHSYVCPVFEATGECPQESRCKLHHPKK
KNKSKRSKVDTVQNNSWGRYFETSIGHGSGARIVSLEEEERQKPEQVSGEDFADFIELGS
DIEVPEDADASDDIQPMELDSGNLDMQADNLEAIIKPLRIMRTARV
NT seq
6081 nt
NT seq
+upstream
nt +downstream
nt
atggatccgcaccaccaacccttcggcaacccgcaccaccgccgcgccgcgcaccccggc
aaccactacctagaccagcagcaccccggcggccaccaccaccaccaccaccaccacttg
gccggcggcggcggcgccgctgcccccgcgcggtccaggtatgactacgagtacgactcc
cgtccgatccagtacccccctcccgaccaccaccaccaccaccaccaccaccccctcccg
cgcgtccaccaacagcaaccgccgcccccgccgccgtcccagccgctgcccccgccgcca
cctccccagccgcaccaccgccacgacgtcccccactacgcccctctcccgctccgcccc
acgccggaaacctactccccgccgccgtaccacaacccccctcctcctcaacagccgtac
caccagcagcgccacggcgacttccgccccgccgacgagatccgccgcatccccagccac
cacccgcaccaccagcagcaaccgcaccaccaccaccaccaccaccagcagccgcagcac
cttcaccagcagccgcaactctcatggcaggaggctgatgaggggcgccgctacgccgcc
caccagctgaagccacagctccagtgggaggaggctgaggaggagcgccgctacgctgcc
cgtcagctccgggtgtcgctgtctccgcccggtgcacggaagaggtaccgctgcgccatg
catgactcgggtgaccgggagagcacatccagctctggcccgccaccccgccgccagagg
caacagctgcaccctagctattctccccctccagatgacagttttgtagatagggcaact
agttattcttgttatggcagccacgagggctttgtggcgcacggcgacagtaatggaaac
aggaagatgccgatgtccatgtcaactatgctgcctggctcgcctaggcgagccccacag
aagatggctcctacaagattgtctgtgtggcatcgtattgaggagaatccctcactgtat
acgccaccttctccacgcaaggtgccaaaggaggtgcatatttcgccgagcaagacaaaa
aattctgggtctgcttcaaaggaattgtccagcgtaatttctttggattgcaaggcaaag
agttctgattgtaagggtagtgatgatagtgcaggaatgaagaagaatgtagcaaagaaa
actgagaaggtgctgtcctcagttattgtgaagccttcaccagaagacaaggaaaaagaa
agagctgttaataaggttaccaagaagcctgacaaggttggtaatagtataccaggtttc
acgagtgcaggtgtgagatcagcagcctttcctgggtctggtgtgaagaaagtgaaaaag
atagtcatcaagaagattgttaggaagatcggtgccaaagataaacaaactagtagttcg
atcgtctcagaaaaagacagcattgatgctaatgtaaatgcctctgagaaagaagaagct
gatgcaaatgcttctgaaaaagaagaaggtgagatcacaacatcatctttagaaaaggat
gctatttctgcacacaatttggtcagtactagtgatacagctggagttgctaacagcctg
gaggtccagaaggaacaagatagtgatttggtgaatctgaagaagaacaatgctgcttca
accattgcatctactgataccgttgacacagcaaatgctagcaggagaaagcatcctgaa
aaagaagattataagagcttcgtaaagtcaattgatggtaatgcatctccagctattgaa
tctattaaaacatttaatgcaagtggtgttgaacatcctggaaaagaagatgatgggtgt
ttcaccaattcaagtgttaaaaatggtacccttaattgtgagaacaataattctcaacag
gaagaagagggtgaaattctggctgtttcaggtccagtgaatgttgcaaataattgccca
aggattcttgatgcagtggaaccacatgattgtgaagtggagaacatggaagacaacaaa
gttcctgaggtcctcagtggaaatagtgctgtttatgtgaatggagctaaggattgtaca
acagaagttagtggaagtgaaaatgacagaagggaagaaggcctttttcttctaaatgat
cccattagaagtcctagtacagatgaagttagcatgactccgagcaaggataaccatgaa
aaagagggtatgaatctgattggtgcaagtgaagtgtgtgctgcttctgtaggccaacct
gagggaaatcccaagatagcagaagccactgttgctcatggtgcacataaggaagaaggc
aatcttctgaacagtccaagagaaaaggatgcagcatcttttggatcttggggaaccctt
gataccacggaagtaagtgctaatgagattacccaggagaaagagtggagaacgcccatt
gaaccaaatgaagctactacttccgcacaccatgtgaaggccttgagtacattagaaatt
aatgttagtgagaatatccagaaggagagccaaatgccgatggattcaagtgcttttcaa
acagtagaatgtgccgaagctcctaacatagtagaagttgttagtagtaagtttgctcag
aatgtagcgtgcaagagccccatggctttaaatgggacgaatgtaggaacttcagataac
tccttgtacactgaggatagcaacatgcaagttgatttccacgatgtgaaagctgcttta
agtaagtcagatcttcccctggatgtagtggatacagatacctatgctctgcagtcatcc
agaaatacagagagcataattatgccatcattggatgatgatcctatgaagatttcctct
ggtgctgttattctgaataatggtgtagggaagagcacttcatctcaagtagcaggactg
acacatcttcatagaccccacccacctcctgacaacaatccatcctccttacattcccat
gattcgccatctgtatctggtaacagtgagcattctgttcgtacagctttgacccttggt
aataatatgtatttcagtagtgcagagagcgagggacagcttggggaaaagcacaaccta
gtggatgtaaaccaaggatttgatgtgacaatgacagaatttggtaatgttagcaaaaga
aaaagtgaatctggcaatggctttatgaatgcaggcagtcagaattggttgactttacca
cttactgtcagctgcttggataatgatgctgctggtagtaatgagaggttaggtttagag
cagattgtggatgaaggtgcctctgtctgtcaggatcatgatagtatgccagatattgac
cagcgtggcagtattgatattttctcttgccaggatcacagcctcaaactatgtgatatc
agtatgcctcaagcagaccttttggcaactgaagagggaaataaggatgttgaggatgag
attgttctcccaggttcttctgttaattctgtaaatgtattagatccatatagttttcgc
acagtggataaacctatagataaccttaataaacggattctcttatcttcacaatctgct
gatgctccaggtcgagagttagcttcttctcaggtatctgttgattctgatcacacctat
catggaagtagtgaggaccctgtgggcgtgtcaagtacaacacctgattcgatatcctcc
tggattgaagccattgtatcagaagctaaaaaggaacatcaatcatgcaaatcctctcta
cttcctattagttctccagacaaggtatcagcaccaaaggaggatagcaagaaggcattg
tcagattcagtagtcaactctgtagtaaaatctcctcctcgagttaatattgcaagctcc
acagtatcgaaggtacctactaaacaggtggctttgcctggttcattgcgagcgccccct
cgcttaaaccagaatgcaaggaacaggacatggcgtcgtgacaatgcgtcatcttctaat
tcattattgcatgtttcacagacttcaggattaccccctaaactcccagtaaaaaagaac
agcaaaagtcaaaactcttatatccgcaagggtaatgccctaattagaaacccagccact
ggaaatcttcattcttctagtctagattctcaaaataagagtaagcctgttatgaggaga
agcatgaactttgtcaggaaagtcgattcaaaagatgtaggacattctcatatttcagtt
gaaagacccaagaccccacctttgccacttcacaccaagtccatcagttgtgatgtgaat
attttggagccattgtctcaaaatttgcagcaacaggtcattgaaactgaaaaggaagat
tccagtgggcaggttaactcaggtgctgacattccaagcattattagttcgcacaagtct
gaagcccttgatgctggtaaagcaatttatgttagaccaaagttaaatcaagtagttgtt
gcacaggggcaacatctttgtgagtcgagtaaccttcccttggataaggttacgttgctg
caaccatccacaacatctgatctctacttcaagaaaaggaaaaatcagattattctgggt
ccctctacttctgatgctccaagttcaaaagatacatctcaggctgagaatataaagtca
ggtgagagtaaagttctaatgtctgcatcttccaacaacaatatcactgtggcaaaggac
aggccgcacaaagctcttcagacaacaaatactgtcagaagttcctctcatgtctggacg
cttagtggacaaaatcctcgaaagaaatcttttgtgggagctattcacatgaaggtcttc
cctcgtatacttccatggaaaagaaaaatattctgccagaacttcagaggcagttactct
tcattgttgaatacaagctctatagggataatgagaaaattattgcaaacaaggaagaga
agtacaatttacactgtctctactgatggattctctcttcggaaatctggagtgttaagt
ataggcgggtcaagtttgaaatggtcaaggtcccttgagaaacattctcaaaaggttaat
gaggaagctacacaggcagttgctgaagttgaaagaaagaaaagagaaaagagaaaacga
cagtctctccgtaacaaaggaaggaatgatcgatattctgcatcagttgctgccaatcaa
ttaacaaatagcagcagagcatcttcagaatatgtgcgtgtcaacaaaggtaaccaactg
gtcagaaatccaaagaaagtaatccgcatgctagcaagtgagaaagttcgatggagtttg
cacactgttagaagacggttggcaaagaaacagcaatattgtcaattcttcactcgcttt
ggcgagtgtaaaaaatctggtggcaagtgcccctatattcatgaccgagctaaagtggct
atctgtactaaatttcttaatggcttgtgttctagtactagttgcaaactaactcacaag
gtcctgccagaaagaatgccagattgttcttactttctgcaagggctctgtaccaacaca
gcctgtccctataggcatgtgaaagtgaactcgaacgcccctgtttgtgaagattttttg
aagggatattgtgctgatggtgatgagtgtcgtaaaaagcacagctatgtatgccccgtc
tttgaggcgacaggagagtgcccacaagaatcaagatgcaagcttcatcaccccaagaag
aaaaacaaatccaagagaagcaaagtagataccgtccaaaacaacagttggggtcggtat
tttgagacaagcattggccatggcagtggagcaaggatagtttctttggaggaagaagag
agacaaaaaccagagcaagtctctggtgaggactttgctgacttcattgaacttggttcc
gatattgaagtccctgaagatgcggatgcttcggatgacatacagccgatggaattggac
tcagggaatctcgacatgcaggctgacaatcttgaagcgataatcaagccacttcggatc
atgaggactgcaagagtttga
DBGET
integrated database retrieval system
