Sorghum bicolor (sorghum): 8083793
Help
Entry
8083793 CDS
T01086
Name
(RefSeq) protein CHUP1, chloroplastic isoform X2
Organism
sbi
Sorghum bicolor (sorghum)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
8083793
NCBI-ProteinID:
XP_002441562
LinkDB
All DBs
Position
9:complement(57870434..57875196)
Genome browser
AA seq
1033 aa
AA seq
DB search
MLVRLGFVVVASVAALTLQRANNGGRHNKDNDQARKREDKARNSEHGEREEEDGEKEEEE
EVKTISGIINSARSLDDDDDDMLSEIESLLSGDIDIPIPRDRFDVNGRPRYNAYMANEAS
EIERLRSLVREMEEREAKLEGELAYMANKASEIERLRSLVREMEEREAKLEGQLAYMANE
ASEIERLRSLVMEMEEREAKLEGELSYMANVASEIERLRSLVREMEEREAKLEGELLEYY
GMKEMETDVTELQKQLKIKAVEINMLNDTINSLQEERKKLQDDVARGEVAKKELEVARSK
IKELQRQIQLEAGQTKGQLMLLKQQVIGLKAKEEEAAKKEVEVERKLKKLKEFEVEVLEL
RRKNKELLYEKRDLIVKLDAAEGKITESDVVANAREEINKLRHTNEDLTKQVEGLQMNRF
SEVEELVYLRWVNACLRFELRNYQTPSGKVSARDLNRTLSPKSQERAKQLMLEYAGSERG
HGDTDLESVSSMPSSPGSEDFDNISIDSSSSRYSFLSKRSNLMQKIKKWGRSKDDSSGLA
SPISGSPLRKPKGPLEALMLKNAGDGTAITTYGKRDPNDVLDDENVASSFQLMSKTVEGF
ADEKYPAYKDRHKLATEREKVIKEKAGQARAQRFGGGHSSALISSPKGALPPKLAQIKER
SPAANAESSEQSSDNQNNTLVVSQMKLANIEKRATRVPRPPPPRSTTASGATNTASGAQT
PRAPGAPPPPPPPPGKAGGPPPPPPPPGALPRNLGGGDKVHRAPEIVEFYQSLMKREAKR
ETSLGSMSSNVSDARSNMIGEIENRSTFLLAVKADVETQGEFVESLANEVRAASFVNIDD
VVAFVNWLDEELSFLVDERAVLKHFDWPESKTDAIREAAFEYHDLMKLQSKVSSFTDDPQ
LACEEALKKMYSLLEKVEQSVYALLRTRDMTVSRYKEYGIPFDWLSDSGVVGKIKLASVQ
LANKYMKRVASELDALEGTEKEPNREFLLLQGVRFAFRVHQFAGGFDAESMKAFEELRSK
MTTQSSAPQISEG
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtgagattaggctttgtcgttgtagcctctgtcgcagctttaactcttcagaga
gctaacaatgggggcaggcacaacaaggacaatgaccaagcaaggaaaagggaggataag
gctcgcaattctgaacatggggagagagaagaagaggatggggagaaagaagaggaggaa
gaggtcaaaacaatcagtggcataattaactcagcccgttcactagacgatgacgatgat
gatatgctttccgagatcgagagcctcctgtcaggagacattgacatccctataccacgt
gatcggtttgatgtcaatggacggccacggtacaatgcttacatggctaacgaggcctct
gagatagagagactgcgcagcctggtgagagagatggaagagagggaggcaaagcttgag
ggcgagcttgcttacatggctaacaaggcctctgagatagagagactgcgcagcctggtg
agggagatggaagagagggaggcaaagcttgagggccagcttgcttacatggctaatgag
gcctctgagatagagaggctgcgcagcctggtgatggagatggaagagagggaggcaaag
cttgagggcgagctttcttacatggctaacgtggcctctgagatagagagactgcgcagc
ctggtgagggagatggaagagagggaggcgaagcttgagggcgagctgctggagtactat
ggaatgaaggaaatggagactgatgtcactgagctgcaaaagcagctcaagatcaaggca
gtggagatcaacatgctcaacgacaccataaactcactgcaggaggagcggaagaaactg
caagatgacgttgcacgtggagaagttgccaagaaagagctcgaagtggctaggagcaag
ataaaggagctgcagcggcagatacagctggaagcaggccagacaaaaggtcagctgatg
ctgctgaaacagcaggtcatcggattgaaggccaaggaggaagaggcggcaaaaaaggaa
gtcgaggttgagcggaagctgaagaagctcaaggagttcgaagtggaggtacttgagcta
agaaggaagaacaaggagttgttgtacgagaagagagatctcattgtgaagttggatgca
gctgaagggaaaataactgagagtgatgtagttgccaatgcaagggaagagataaacaag
ctgaggcatacaaatgaggacctcacaaagcaagtggaaggcctacagatgaacaggttc
agtgaagtagaggagttggtatacctgcgctgggtcaatgcctgtctgagattcgaactc
cgcaactatcagactccatcagggaaggtgtctgcacgtgatcttaacaggacactgagc
cccaaatcacaggagagggctaaacaactgatgttggagtatgcaggatctgaacggggt
cacggtgacacagaccttgagagtgtttcttcaatgccttcttcacctggaagcgaagac
tttgacaacatttcaattgacagttcttccagcagatacagtttcctaagcaaaaggtcc
aatctgatgcaaaaaatcaaaaagtggggaaggagcaaggatgacagcagtggtttagcc
tccccaatcagtggttctccactgaggaaaccaaagggccccctcgaagctctcatgcta
aaaaatgctggagatggtacagccataacaacatatggaaagagggatcccaatgatgtc
ttggacgatgaaaatgttgcgtcctcattccaactgatgtccaagacagtcgaaggtttt
gctgatgagaagtatcccgcttacaaagataggcacaaacttgcaactgaacgggagaag
gtgataaaagagaaggctgggcaagcaagagcacaaaggtttggtggtggacacagttca
gctcttatttcctctcctaaaggtgcactccctccgaaacttgctcaaattaaggagaga
tcccctgcagctaatgctgaatccagtgagcaatccagtgacaaccaaaacaacaccctg
gtggtgagccagatgaagcttgccaacattgagaagagagcaacaagagttcccagacca
cctccccctcgatcaaccactgcttcaggggctactaatactgcaagtggagcacaaacg
ccacgtgcaccaggtgcacctcctcctcctcctccacctccagggaaagctggtggccca
ccaccaccgccgccacctccaggtgctctaccaaggaaccttggtgggggtgacaaggta
caccgtgcaccggagattgtggagttctatcaaagtctcatgaagcgtgaagcaaaaaga
gagacatctttaggatcaatgtcatccaatgtttctgatgccaggagtaacatgattgga
gagattgagaacagatcaacctttctcttagctgtaaaagctgatgtggagacacaagga
gaatttgttgagtctctagcaaatgaggtccgagcagcaagctttgtaaatattgatgat
gttgttgcatttgtaaattggttggatgaggagttatctttcttggttgatgagcgagca
gtgctaaagcattttgattggccagagagcaaaacagatgcaataagagaagcagctttt
gagtaccacgatctgatgaagttacagagcaaggtttcatcctttaccgatgatccacaa
cttgcatgtgaagaagctctcaagaagatgtattctttgcttgaaaaagtggagcagagt
gtctatgcactactccgtacaagagacatgaccgtctcacgctacaaggagtatgggatc
ccatttgactggctgtctgattctggagtagttggcaagatcaaattggcatctgttcag
cttgcaaacaagtatatgaagagggttgcctcagaacttgacgcattggaaggcactgag
aaagagcccaatagagagtttttgcttctccagggtgtgaggtttgctttccgggttcat
cagtttgctgggggctttgatgcagaaagcatgaaagcttttgaagagctaagaagcaaa
atgaccacacagtcatctgctccacagatatctgaaggctga
DBGET
integrated database retrieval system
