Sorghum bicolor (sorghum): 8083933
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Entry
8083933 CDS
T01086
Name
(RefSeq) pentatricopeptide repeat-containing protein At4g21300
Organism
sbi
Sorghum bicolor (sorghum)
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Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
PPR_1
PPR_3
E_motif
PPR_long
Eplus_motif
DUF832
Motif
Other DBs
NCBI-GeneID:
8083933
NCBI-ProteinID:
XP_002466353
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Position
1:complement(5272648..5278183)
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AA seq
896 aa
AA seq
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MQYGASRGTLIAKIHPRPRPRSHAAVTLVRSAASDLDDGDLVAVGSQFAMRLAPPILKMP
RRPCCSTTFSATEVVTDVSSADRLLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLA
LHTRLLGMYVLARRFRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMW
THPAAPSPDAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGL
LRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSV
CAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTW
NGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIR
NCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQM
FRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAK
CGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSA
LSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNE
VSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQC
MTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVE
LADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVN
NSSHLFVASDKSHPESEDIYTSLKALLQELREEGYVPRPDLCHPMHPDNNTQVLAI
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatggagcttcgcgggggacgctgattgcgaaaatccatccccgtccccgacca
cgatcgcacgcagcagtcacgcttgtgcggtcagccgcctcagacctcgacgacggcgac
ctcgtcgccgtcggtagccaattcgccatgcgcctcgctccccccatcctcaagatgccg
cggcggccatgctgctctaccactttctccgctacggaggtcgtcacggatgtctcctcc
gcggaccgcttgctggcgctcctgcgcggctgcgtctccgcgccgcacctcccgctgggc
ctgcaaatccacgctcgcgccgtcgtgtccggcgctctctccaaccacaaccacctggcg
ctccacacccggctcctcggcatgtacgtcctcgcgcgccggttccgcgacgccgtagcg
gtgttctccgcgctcccgcgcgccgccgccggatcatcgctgccgtggaactggctcatc
cgcgggttcaccgcggccgggcaccacagcctcgccgtcctcttctacgtcaagatgtgg
acccaccccgccgcgccgagccccgatgcgcacaccctcccttacgtcgtcaagtcctgt
gccgcgctcggagcggtgtccctcggccgcctggtccaccgcacagcgcgggcgaccggg
ctcgccagcgatgtctacgttgggagcgcgctcatcaagatgtactctgacgctggcctc
ctcagggacgcccgcgacgcgttcgacggaatgccatggcgggattgcgtcctgtggaac
gtgatgatggacgggtacataaaggctggagacgtgggtggggcggtgcgtttattcagg
aacatgagggtgtctggttgcgagcccaattttgcgactctggcgtgctttctgtctgtg
tgtgctgctgaggctgacttgctgtctggggtgcagcttcactctctggcggtgaaatgt
ggtttagagcaggaggtcgcagtggcgaacacattgctatcgatgtatgccaaatgccgg
tgcttggatgatgcatggaggttgtttgaacttttgccacgggatgacttggtaacctgg
aacggaatgatctcaggatgtgttcaaaatgggcttcttgatgaagctttgggattgttc
tgtgatatgctgaggagtggtgctcgaccagattcagttacgctagtgagtttgttaccg
gctttgactgacttgaatggtctcaagcagggtaaggaggtacatggttatattatcagg
aattgtgtgcacatggatgcctttttggtgagtgctttggtggacatctatttcaagtgc
agggatgtgagaacggcacgtaatttgtatgatgcggctagggctatcgatgtggttatt
ggcagtacagtgatatcaggttatgttcttaatgggatgagtgaaaaggcactgcaaatg
ttccggtacttgttagaacagtgcatcaaaccaaatgctgttactgtagctagcgtcttg
cctgcatgtgctagtatctctgctttgcctcttggtcaggagatccatggttatgttcta
agaaatgcatatgaaggaaaatgctatgtggagagtgcactgatggacatgtacgcaaag
tgtggcagacttgacctgagccattatatcttctccaaaatgtctctgaaggatgaggtg
acatggaactcaatgatttcaagcttttcacagaatggagaaccacaagaagctctagac
cttttccgtcagatgtgtatggaaggaataaagtacaataatgtaaccatatcttctgcc
ctatcagcatgcgcgagtttgccagctatatattatgggaaggagattcatggtgttatc
ataaagggtcctataaaggctgacatatttgctgagagtgctctgatagacatgtatgcg
aaatgtgggaacatggagttggctcttcgtgtttttgaattcatgcctgataagaacgaa
gtatcatggaatagtataatttctgcctatggggctcatggtcttgttaaagagtcagtg
agcttcttacatcgtatgcaggaggaaggatacaagccagatcatgtaacattccttgct
ttgatatctgcttgtgctcatgctgggctggttgaagaaggactccaactttttcaatgc
atgactaaggaatatctgattgcaccacgaatggagcattttgcttgcatggtcgatcta
tacagtcgttctgggaggttagataaagctatacaatttattgctgatatgcctttcaaa
ccagatgctggcatttggggtgcccttctccatgcttgccgtgtgcatcgcaatgttgaa
cttgcggacattgcttcccaagaactgtttaagttggaccctggaaattctggttattat
gtcctcatgtccaatatcaatgcagttgctgggcgatgggatggtgtatcgaaagttaga
agattgatgaaggataataagatcctgaagatacctgggtacagctgggtagatgttaat
aacagcagccatttatttgttgcatcagataaaagccaccctgagtctgaagatatctac
acatccttgaaggccctgcttcaagaactaagagaggaaggctatgttccccgaccagat
ctatgtcaccccatgcacccagataacaacacgcaggttctggcaatatga
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