Sorghum bicolor (sorghum): 8084839
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Entry
8084839 CDS
T01086
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
8084839
Spliceosome [BR:
sbi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
8084839
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
8084839
NCBI-ProteinID:
XP_002458169
UniProt:
C5XR40
A0A921RFA7
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Position
3:complement(55908186..55913909)
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AA seq
553 aa
AA seq
DB search
MASGGQPQFRYTQPPSKVLHLRNLPWDCTPEELVELGTPFGKVVNTKCGVGANRNQAFIE
FADQNQAIAMISYYASSAEPAQVRGKNVYLQYSNRQEIINNKTTGEGSGNVLLVGMEGVA
PDSVSIDVLHVVFSAFGFVHKIATFEKASGYQALIQFSDAETATSAKAALDGRCIPSYLL
PELDGACTLKISYSAHSVLNVKYQSHRSRDFTNPYLPFLDSAKDASGLDGKKQEAESNIL
LASVENMQYVVTIDVLHEVFSAFGFVQKIAIFEKNGFQALIQYPDIQTAVAAKEALEGHS
IYEGGYCKLHLTFSRHTELNVKVNNERGRDYTKGNVTPSSDRPSILGPQPIPNVGAAIPP
APGSVATNSVMQPGDPSVAVPSNPSSEPLLQAPVVSSGGPAQYPNQAILQAPPGVAPQFP
GYGALQFAQGSAQAQMVQPSGQGSQQMSSHVNYQLPPGAAQFMQYLGNGSHPLPNAPGPQ
TMPYPALGGQQLPPGPQMMQAPGFGGLPFSQGPGQPMPQFPMYGTQQFPPGMEPQMMQGG
QQFTFAPRGPYGR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcttccggtgggcagccgcagttccggtacacgcagccgccgtcgaaggtgctccac
ctgcggaatttgccatgggactgcactcccgaggagctggtcgagctggggacccccttc
ggcaaggtcgtcaacaccaagtgcggcgtcggcgccaaccgcaatcaagcattcatcgaa
ttcgctgaccaaaatcaagcgattgccatgatatcatattacgcatcgtcagcagagcca
gcacaggtaagagggaaaaatgtgtaccttcagtactccaatagacaggagattatcaac
aacaagacaactggggaaggttcaggcaatgttttgcttgtgggaatggagggtgttgca
ccagattctgtcagcattgatgttctacacgtggtattttctgcttttggatttgtccat
aagatagctacctttgagaaagcatctggttatcaggcattaattcagttttctgatgct
gaaaccgcaacatctgcaaaagctgcactggatggtagatgcattcctagctatttgcta
ccagaactggatggggcctgcactttgaaaatatcctattcagcacacagtgttctcaac
gtcaagtatcagagccacaggagtagggacttcactaatccttaccttccttttctggac
tctgctaaagatgcctctggactggatgggaaaaagcaggaagcagagagcaatatactg
cttgcatctgttgagaacatgcaatatgttgttacaatagatgtgcttcatgaggtcttt
tcagcttttggatttgtacagaagattgctattttcgagaagaatggcttccaagcattg
atccaatatccagacattcaaactgcggttgcagcaaaagaagcactagaaggacacagt
atctatgaaggtggctactgcaaactgcacctcacattttcacgccatactgagcttaat
gttaaggttaacaatgagcgaggtagagattataccaaggggaatgtcactccaagcagt
gatcgaccttccattcttggtcctcagccaataccaaacgttggtgctgccattccacca
gctccgggtagtgttgccaccaattcagtaatgcaaccaggagatccatcagttgctgta
ccttctaatccttccagtgagccactcctgcaagcacctgttgtttcctcgggtggacct
gcacagtaccctaaccaggccatcctacaagccccacctggtgttgctccacagttccca
ggctatggtgccctgcagtttgctcagggctcagctcaagcacaaatggtgcagccttca
ggccaaggaagtcaacagatgtcaagtcatgtaaactatcagctacctcccggtgcagcc
caattcatgcagtatctcggcaatggaagccatccacttccaaacgcccctgggccacaa
acaatgccttaccctgccctcggtgggcagcagctacctccgggtcctcagatgatgcaa
gctccaggatttggaggcctgcctttttcacaaggtcctggacaaccaatgccacagttc
ccaatgtatggtactcagcagtttcctccgggtatggagccccagatgatgcagggaggc
cagcagttcacatttgcacctcggggtccatatggtcgttag
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