Syngnathoides biaculeatus (alligator pipefish): 133490989
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Entry
133490989 CDS
T09681
Name
(RefSeq) tenascin-like isoform X1
KO
K06252
tenascin
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04510
Focal adhesion
sbia04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133490989
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133490989
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sbia00536
]
133490989
Glycosaminoglycan binding proteins [BR:
sbia00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133490989
BRITE hierarchy
Motif
Pfam:
fn3
Fibrinogen_C
EGF_Tenascin
EGF_2
Pur_ac_phosph_N
DUF4998
EGF
hEGF
Actin
dCache_3
Motif
Other DBs
NCBI-GeneID:
133490989
NCBI-ProteinID:
XP_061657775
LinkDB
All DBs
Position
17:complement(20882077..20925993)
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AA seq
1482 aa
AA seq
DB search
MATTVLVRCLLVSALLGFSAAGLVKKMLRHRRQMPLEHNITSPGADHQSVVFNHVYNINV
PAGHLCSVDLDASESLAPSETAMTSGRHLTADGESQIIFTHRINIPRRACGCADDLSRIQ
DLMSRIEMLEDEVSVLRSRCGGGERVCCSTQGVGNVGNRSLCGGHGNYSAETRGCTCEAG
WKGVNCTELECPEGFLGDDCSQSICPENCRDHGHCKDGKCVCKEPWIGVDCSELICPKDC
FGRGRCVNGTCHCEPGFSGEDCEQLTCPADCHGNGLCVDGRCACTAGYGGDDCSRLTCLN
DCNGRGACFNGMCICDNGYQGDDCSQLACPNDCNARGQCVNGQCVCDVGFQGDDCAEVSC
PNDCLQRGRCVNGQCVCQEGFAGEDCSIRTCPSNCYGRGECVEGRCECHAGFTGNDCALL
SCPNNCQNRGRCLDGQCVCDEGFAGEDCGRKACPNDCLTRGRCNDGFCVCQEGYSGHDCS
RITCPDKCNGRGRCVKGRCECESGYEGESCAERSCLNGCHDRGRCVDGQCVCDEGYIRDD
CSEVSPPKDLAVGEVSTETVDLSWINDMLVTEYLITYVPTRPGGLLLNFTVPGDQNTATV
KELEPGFEYDVNVYAVLSNKRSVPVGARVATALPQPEGLRFTSVGETSVEVMWEQLNVSF
DGWEIYFRNMKEENGKVVSTVPSSQNRFVQSGLGPGQDYEVSISVVKNNSRGPPAIQQVT
TKIDAPRHLQVLDVSDSSALISWSDPVAETDRVTLFYKTSQDSSEAAKVEIFPPDKQHSL
QGLKADTEYTVSLVARSRDVSSEAATTTFTTALDAPRELIAVLQTEDSITLRWRNSQADV
DSYRVKYSPLSGAAHGEEVLPRGPGETTIATIRGLKPGTEYGIGVTGVKNERESLPATIN
AATELDPPRNLEQTESTETSISIRWEKPRAKVSRYRLVYVSRDGQVEETVIPASETTFVL
PVLTPATSYTVTLTAERGHRMSSPVTLAASTGLRTPKGLRFSDVTDSSAVVHWSMPQSAV
DNYHITYMPFEGGSQMTVTVDGNVLQALLPNMSPGRMYQVSVSAVKGLEESDPSGDVVTT
ALDSPQDLTTINITDTSALLRWKPSVAAVDGYVLTYRSESVSPTVERVSGTELEIGSLLP
GTLYTVELFASREAQMSASILTEFTTKVDCPRDLVAVNIGTDSATLTWRPPQAAISGYSL
TFSAADGMTREVMLSPTATSYNMAQLAGSTEYTVRLQAVTGAERSRHVTTVFSTVGQVHK
YPKDCGQIFLNGERTSGVYPVYVGGVEGQLIQVYCDMDTDGGGWMVFLRRQNGKLEFFRN
WKNYTAGFGNLNDEFWLGLGNLHKITSAGQYVLRVDLKDSGESAYAQYDKFSIAEPRTRY
KIYIGAYSGTAGDSMTYHQGRPFSTFDNDNDIAVTNCALSYKGAFWYKNCHRVNLMGKYG
DKSHSKGVNWFHWKGHETSIEFAEMKLRPVDFGNPESRKKRS
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atggccacaacagttctcgtgcgctgcctcctcgtcagcgccttactcggcttctcggcc
gccggtcttgtgaaaaagatgctccggcatcgtcggcagatgcctctggagcacaacatc
acctcacccggcgcggaccaccagtctgtggtctttaaccacgtctacaacatcaacgtc
cccgctggtcacctgtgctccgttgacctggacgcatcagagagcctcgcaccctcggaa
accgccatgacctcaggccggcaccttactgcagatggggagagccagatcatcttcacc
caccgcatcaacatccctcgcagggcttgcggctgcgccgacgacctgtcccgtattcaa
gacctcatgagccgtatcgagatgctggaggacgaagtgtcagtcttgaggagtcggtgt
gggggtggtgagagagtctgttgcagcacacagggggtagggaatgtggggaacaggtct
ctgtgcggcggacatggaaactacagcgcggagacacgcgggtgcacgtgtgaggccggc
tggaagggcgtcaactgcactgagctcgagtgtcctgaaggtttcttgggggatgactgc
tctcagagcatctgccccgaaaactgccgagatcacgggcactgtaaggacggcaagtgt
gtctgcaaggaaccctggatcggtgtggactgctccgaactgatttgcccgaaagattgc
ttcggccgtggacgctgcgtaaatggaacctgccactgtgagcccggattctcgggggag
gactgcgaacagctcacctgtcccgccgactgccacggtaacggcctctgcgtcgacggc
cgctgtgcttgcacagcgggttacggcggcgacgactgctcccgcctcacctgcctcaac
gactgcaacggcagaggtgcctgcttcaacgggatgtgcatctgcgacaacgggtaccaa
ggtgacgactgcagtcagttggcgtgtccaaacgactgcaacgccaggggccagtgcgtt
aacgggcagtgcgtttgcgacgtcggattccaaggagacgactgcgccgaggtttcctgc
ccgaacgattgcctccagaggggacgctgcgtcaacgggcaatgcgtgtgccaggaaggc
tttgccggcgaggattgcagcatcaggacgtgcccctcgaactgctacggtcgtggcgag
tgcgtcgagggtcggtgcgagtgccacgccggcttcaccggaaacgactgcgccctgctg
agctgcccaaacaattgccagaaccgcgggcgctgcctcgacgggcagtgcgtgtgcgac
gaaggttttgccggcgaggactgcggtcggaaggcgtgcccaaatgactgcctgacgcgc
ggccgctgcaacgacggcttctgcgtctgtcaggagggctactcgggccatgactgctct
cggatcacctgtccggataagtgcaacggcagggggcgctgcgtcaaaggacggtgcgag
tgtgagagcggctacgaaggggagagttgcgcagaacggagctgcctcaacggctgccac
gacagaggacgctgtgtagacggtcagtgcgtctgtgatgaaggatacatcagagacgac
tgctctgaagtgtctcctccaaaggatctcgctgtgggtgaggtcagcaccgagacggtg
gacttatcctggatcaacgacatgctggtgaccgaatacctcatcacatacgtgcccacc
cggcccggcgggttgcttttgaactttaccgtgcccggcgaccaaaataccgccacggtc
aaagagctggagccgggtttcgagtacgacgtcaacgtgtacgcagttctgagcaacaag
aggagcgtccctgttggcgccagggtggccacagctcttccacagccagaaggtttgaga
ttcacgtctgtgggggagacctccgtcgaggtcatgtgggaacagctgaacgtttctttc
gacggctgggagatctacttccgtaacatgaaagaagaaaatggcaaggtggtgagcaca
gttccctcatcacaaaaccgctttgtccagtcgggcctgggtccaggtcaggattacgag
gtgtccatcagcgtagtaaagaacaacagcaggggaccaccagcgatccaacaagtcaca
accaagattgatgccccacggcatctccaggtgctggacgtgagcgactcctcagcactg
atcagctggtctgatccggtggctgagacggaccgggtgactctattttacaagaccagc
caagactcttctgaggccgccaaagtggagatcttcccaccggacaagcagcacagccta
cagggcctgaaggccgacacagagtacacggtgtcacttgtggcccgcagccgagatgtc
agcagcgaagcagctaccaccacctttaccacagcactggatgctcccagggagctgatt
gctgtactgcaaacagaagacagcatcaccctgaggtggcgcaacagtcaggccgatgtg
gacagctatcgtgtgaaatacagcccgttatctggcgcagcccacggcgaggaagtgtta
ccacgaggaccgggagaaaccaccatagccacaattcgggggctgaagccggggacagag
tacgggattggtgtgacgggggtgaagaacgagcgggaaagcctgccagctaccataaac
gcagcgaccgaactggaccctccccgaaatctggagcaaacagagtccactgagacatcc
atcagtattcggtgggagaagccgcgcgccaaggtgtctcgataccggttggtgtatgtt
tccagagacggacaagtcgaggagactgtgatcccagcctccgagactacatttgtctta
cctgtcctgactccggcgacaagctacacagtaactttgactgcagagcgaggccacagg
atgagctcaccggtcactctggctgcatccacaggtctgagaactccgaagggccttcgt
ttctctgacgtgacagactcgtcagccgtggtccactggtctatgcctcagtctgcagta
gacaactatcacatcacctacatgccatttgagggaggaagccagatgaccgtaactgtg
gatggcaacgtgctgcaagctttgctgccaaacatgagtcctggcaggatgtaccaagtg
agtgtgagtgccgtgaagggtcttgaggagagtgaccccagcggtgacgtcgtgaccact
gctttggacagtcctcaggacctgaccacgattaacatcacggacacctccgctctgttg
cgatggaaaccgtccgtggccgcggtagacggatacgtgttaacttatcgatccgagtca
gtgtccccgaccgtggagcgtgtttcgggaaccgaattggagattggctcgttgcttcct
ggaactctctacaccgtggagctctttgccagcagagaggcgcagatgagcgcttctatc
ttgacagaatttaccaccaaagtggactgccctcgagatctggtggccgtcaacattgga
acggacagtgccaccctgacgtggagacccccgcaggccgccatcagcggttactccctg
accttctcggcggcggatggcatgacccgggaggtcatgctgagtccgaccgccacgtcg
tacaacatggcccagcttgccgggtccacagagtacacggtccgactgcaagcagtcacc
ggagctgagagaagtcgccacgtgaccaccgtctttagtacagtgggccaagtccacaag
tacccaaaagactgtggtcagatcttcctgaatggtgagcgcacgtcgggcgtgtacccc
gtctacgtgggcggcgtggagggccagctcatccaggtctactgtgacatggacacggac
ggcggaggatggatggtcttcttaagacgacaaaacggaaagttagagttcttcaggaac
tggaagaactacactgctggtttcgggaacctgaacgatgagttctggctgggtctcggc
aaccttcacaagatcacgtccgccggccagtacgtgctccgcgtggacctgaaagacagc
ggcgagtccgcctacgctcagtacgacaagttctccatcgcagagcccagaacgcgctat
aagatttacatcggggcttacagcgggaccgcaggcgactccatgacataccaccagggc
cgtcccttctccaccttcgacaacgacaacgacatcgccgtcaccaactgcgctttgtcc
tacaagggggccttctggtacaaaaactgccaccgcgtcaacttgatgggaaaatacgga
gacaagagtcacagtaagggcgtcaactggttccactggaagggccacgagacctccatc
gagtttgccgagatgaaactccgaccggtcgactttgggaatccggagagcaggaagaaa
agatcgtag
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