Syngnathoides biaculeatus (alligator pipefish): 133493127
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Entry
133493127 CDS
T09681
Symbol
lrrc4.1
Name
(RefSeq) leucine-rich repeat-containing protein 4
KO
K16351
netrin-G2 ligand
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133493127 (lrrc4.1)
BRITE hierarchy
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
I-set
Ig_3
LRR_9
LRRNT
ig
V-set
Ig_2
V-set_CD47
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
133493127
NCBI-ProteinID:
XP_061662047
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All DBs
Position
20:7683855..7688138
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AA seq
948 aa
AA seq
DB search
MCHIMSLLGRVASHRARKAALLCVVFLMARAWSSASLALGAAASQGPQGCPPQCSCSNQQ
GKVVCTRRGLTRVPPGIPANTRHLNLMENAIEAVQADSFRHLHHLEVLQLGRNAIRQIEV
GAFNGLTSLNTLELFDNRLTVVPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRL
DLGELRKLEYISEGAFEGLQNLKYLNLGMCNIRGDMPNMSPLKGLEELEISENHFPVIKP
SSFKGLNSLKKLWVMNAQITVIERNAFDDLPSLVELNLAHNNLSTVPHDLFSPLRYLVEL
HLHHNPWNCGCDAVWLARWLREYIPTNSTCCGRCHSPANMRGRQLVEVDRGEGAAIQCSA
PFIADAPRDFNISAGRVAELRCRTAQMSSVRWLLPNGTILTHASSHLRISVLNDGTLNFS
NVLAIDTGTYTCMVSNAAGKSNASAYLNVSAAELNTSNLSYFTTVTVEVLGPTTEMPKSK
KTTTTSAATAVAGIAGGGLGLGTTTTTASPSVFQPVFISTPTVLLQSTDSPPGAAKPSVV
PGLKGATSKPGKSGPSLDEVMKTTKIIIGCFVAVTLMAAVMLIAFYKLRKRHQQRSTVAA
ARTVEIIQVDEEDLPPPASAAQETALTLPEIRDHNSIHKLDYLSHKTDYSYHKPKAEYKP
QPDFTLHKPKAEYTTYKPNMDFHCHKSIPDYSTHKSTPDFSLHRPKLDYSPFRQDYNTQK
PKAEDSPFKSDFGTHPKARTDYSPFKSDYSTHPRQKIDFSPFKRDYSTQPKTKHDYSPLR
SDYNTQHKHKVEHSPFKHDFGTHPRSKPDYSPFKPGYSTQPKPKSDYSVQRCTPDSNYRP
KDHYNAFKTDFSPHKADFSAFKLGFSPHAQRPKMDCSPHKVDYSPHKMDFSTMKPKYNTY
KPSGHGAKWTENNVGNSLPRTLPSTITALAEPFVIKTHTKEKVQETQI
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgtgccacatcatgagtctcctggggagggtagcttcgcatcgtgccaggaaagccgcc
ctactctgcgtagtgttcctgatggcacgagcatggagcagtgcctcgctggccttaggg
gcagcggcgtcacaaggaccccagggctgtcccccacagtgctcttgcagtaatcagcag
gggaaggtggtgtgcacacgacggggcctcactcgcgtgcccccgggcataccggctaac
acgcgacacctcaatctgatggaaaacgccattgaggcggtgcaggctgactcattccgc
cacctgcaccacctcgaggtgctccaacttgggcggaatgccattcggcagattgaggtg
ggtgcgtttaatggacttactagcctcaatactctcgagctgtttgacaaccggctgacg
gtggtacccagtggggcctttgagtacctgtccaagttaagagaactgtggctgaggaac
aaccccatcgagagtattccttcctacgccttcaaccgggtgccatccttgatgcggttg
gaccttggcgagttgcggaaactggagtacatctcggaaggagctttcgaagggctacaa
aatctcaagtacctcaacttgggcatgtgcaacatcaggggggatatgccaaacatgagt
cccctcaagggtctggaggagctggagatctctgaaaaccacttccccgtgataaagccg
agctcctttaaaggcctgaactcactgaaaaagctatgggtgatgaacgcacagataaca
gtgatagaacgcaatgcctttgatgatttaccatcactggtggagcttaatcttgcccat
aataacctgagcactgtgccccacgatctgttctccccgctcaggtacctggtggagctt
catctccaccataatccttggaactgtggctgcgatgctgtatggttagcacgctggcta
agggaatacatccccacaaactcaacttgctgcggacgctgccactcacctgccaacatg
aggggtcgacagctcgtggaggtagaccggggtgagggggctgcaattcagtgttccgca
ccgttcattgcggatgcaccaagggattttaacatctcagctgggagagttgctgagctt
cggtgtcgcacggcccagatgtcttcagtacgctggctcctaccgaatgggactatcctg
actcatgcctccagtcatctaagaatatcggtactcaatgacggcaccttgaatttctca
aatgtccttgctatcgacactggcacgtatacctgtatggtatccaatgcagctgggaag
tccaatgcgtcggcctacctcaacgtgagtgcagctgagctcaacacatccaacttgagc
tacttcacaactgtgacagtggaggtcttgggcccgaccacagagatgcccaaatcgaag
aagaccacaaccacatctgctgctaccgcggtggctggcatagcgggtggaggactgggc
cttggaacaaccaccacaactgcctcaccctccgtctttcaaccagtgttcatctctaca
ccaactgtgttgctacaaagcacagacagcccaccaggtgcggcgaagccatctgtcgta
cccggactcaaaggggccaccagcaaacctggaaaatctggtccgagtctggatgaggtc
atgaaaaccaccaagatcataattggttgctttgtggcagtaacactgatggctgccgtg
atgctcattgccttctacaaactgagaaagcgccaccagcaaaggagtaccgtggcagct
gcccgcaccgtggagatcatccaggtcgatgaggaggaccttccgccaccagcttctgca
gctcaagagacggctctcacgctccctgaaattagggaccataacagcatacacaaattg
gactatctcagtcacaagacggactacagctatcacaaacccaaggctgaatacaaacct
cagcccgatttcacgcttcacaagccaaaagcagagtacacgacatacaagcccaacatg
gacttccattgccacaagtccatcccagactacagcactcacaaatccacaccagatttt
agcctgcatagaccaaagcttgactacagcccctttaggcaggactacaacactcagaaa
ccaaaagcagaagacagcccattcaaatcggatttcgggactcacccaaaagcaagaaca
gactacagcccattcaaatcagactacagcactcatccaaggcaaaagatagacttcagc
ccgtttaagagagattacagtacccaaccaaaaaccaaacatgactacagcccattacga
tctgactacaacacccagcataaacacaaggttgagcatagccccttcaagcacgacttt
ggaactcatccaagatctaaaccggattatagtccattcaagcctggctacagcactcaa
ccgaaaccaaaatcggactatagtgtccagagatgtacaccagacagcaactacagaccc
aaggaccattataatgctttcaagacagacttcagtccccacaaagcagacttcagcgcc
tttaaattaggattcagtccccatgctcagagacctaaaatggattgcagtccacacaaa
gtggactacagcccccataagatggacttcagcaccatgaaaccgaaatacaacacctac
aaaccgagtggccatggggccaaatggacagagaacaatgtgggcaattctttgccccga
accttgcccagcaccatcacagcattggctgagccctttgtcattaaaactcatacgaag
gagaaagtacaggagactcagatttaa
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