Syngnathoides biaculeatus (alligator pipefish): 133501351
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Entry
133501351 CDS
T09681
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03013
Nucleocytoplasmic transport
sbia03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133501351 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
133501351 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133501351 (nup153)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133501351 (nup153)
BRITE hierarchy
Motif
Pfam:
Nup153
zf-RanBP
Motif
Other DBs
NCBI-GeneID:
133501351
NCBI-ProteinID:
XP_061677026
LinkDB
All DBs
Position
1:14853570..14868290
Genome browser
AA seq
1467 aa
AA seq
DB search
MTAIRRRNTDRTHSLSDARAMAATGGGKIRSRRYHVDSRPYAKSKQQSGLISRVTDKVKS
IVPWLQNYFKNGEAPEGEGGGGGGGGGGGGGGGAAAAADATENCQPPGPNALPPNGGKEG
PPPLDGRRTPEPSTSNTEPSTSRASLNIQDYVLSRPPLSHSHLHFSSLEATTPTLGGAGL
FSPPSTSAAPGPFSTGFSLVKEIKDNLSQHEDDNISTTSGFSSRASDKDVPASKTASLPQ
LWSPETDRTISAPQHSQSGLKRPAFNLSIFGTSANSTLNNTMLSTSQLGDSPFYPGKTTY
GGAAAVRSARSRPGTPYQAPVTRQIKAKPAGAQPCGVTSATARRILKSLERMSSPLADAR
RIPATPSPSFSMSVDGGDLEVSHFQSKRKRMDSNLPPVQKLVVPNPLFTSANRSVSFRPS
LTPKGQSRTLDRPPRDKPTRQSPLLPDRNPGGPSRSTTGAGGDGYPLSSTPTAGGYGGGK
MKRDRTSARPSSKRTENDEVAELPDLPTISLPICTSALPTFSFSSPLPPVATIVTPSVAV
TPAKEMAINKATKASPPCVPFTFSSPIVKATPTSLPNFSPTVGFTFSAPVTKLGSSMSNG
NLGLPLATAVKVSTNTSTEDFDGPFKPAKTLKQGSVLDLLKAPGFASTTAQKSSETNTQS
AAPSPAPTTSVSFSSSSTGLSDLFKNPAGLSYDVCRAQNKSLDTQHVSRTSPQPGNATKD
SKTSAPSCTGPKSSANVGPIVSKPAANWECDTCLVINKPESVKCVACETAKHGTGLKASS
SLPSAFTPAEEAAGPAPPASSTSPCAAVGDPFKKPESASDGDVCALQNKAADAKSVPCTN
AKPGAAVSPAASSAPIGFGAKKPESSWECEACWLQNKSTDLKCVACQAAKPGAQVKPQGT
FPSTSNAGGFTFGTSNSTSESPSGGFKFGVAASKATSASSGGIKFGVPFGSPSSEVSPKD
ANTSLGFKFSTPSEGFKFGIPPGDDKKPEEPAVGAGFKFGASGGISFGMGSPSPENSSSS
LKTPFSFGLPKPEEKTSAPTSSASAAVTTPASSQVKSSDNGRASSDTDTTAAASSVFGTP
GQGASTTPVAPTFGFSSAQKKPAAPTFAFGKANEEKRELPAASAPSPFIFGGASKDGDPA
PAVPGGFSFGKPSAPAEQPPAFIFGKPADKGDASNSNAANSSFGLGQSAAASDGPKLPFF
FTGSNAAAATSSASSTPTASLFGSGTQAPALSLPPAPTTFLFGQAAPAAPAAGDAPPAKA
FVFGQSQDTPSGAPVNPAPAQAAQPFIFGAAPGAAAPAVAPSINFGGSGTSSSPSPARNP
FLVSSSNPPEFRAGQTPAFGSTFGSPFPSAPPQAPAFGAKPAAPVFGQQTNAVPVFGAPA
AAANSAQGGGFQFGGASAFGSTNSTGVFNFGAGTTASPTPSAPAGGGFNFSQPLAFNIGS
SKSSTSSPAREQTIAGRKIRTAVRRRK
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atgacagctatccggcgccgaaacaccgacaggacacactcgctctccgacgcaagagcc
atggcggccacgggtggagggaaaatccgaagcaggagataccacgtcgactccaggcct
tacgccaagagcaagcagcagtcaggcttgatcagccgagtgacggacaaagtcaagagc
atcgttccgtggctacaaaactacttcaagaacggagaagctccagaaggcgaaggtgga
ggaggaggaggaggaggtgggggcggaggaggaggaggagcagcggcggcggcggatgct
acggagaactgtcagccgcctggtcccaacgctcttcctcccaacggtggcaaagagggg
ccaccgcctctcgatggacggcgcacgcctgagccgagtaccagtaacacagagccctcg
accagccgggcgtccctgaacattcaggactacgtgctgtcccggcccccgctcagccac
tcccacctccacttctcgtcgctggaggccaccacgccgacgctgggcggcgccgggctc
ttttcgccgccgtccacctccgcggcgccggggcccttctccaccggcttctcgctggtc
aaggagatcaaggacaacctgtcgcagcacgaggacgacaacatctccaccaccagcggc
ttctcctcgcgtgcgtctgacaaagacgtgcccgcctccaagaccgcgtcgctcccgcag
ctttggtcaccggagacggacagaaccatctccgcgccgcagcactctcagtcgggtctg
aagaggcctgccttcaacctgtccattttcggcacctccgccaattcgacgctgaacaac
acaatgctgagcaccagccagctgggcgattcccccttctaccccgggaagaccacatac
ggcggagcggctgcagtccggagcgctcgctctcgacctggaacaccgtaccaggccccc
gtcacgaggcaaattaaagccaagccggccggcgcgcagccctgtggggtgaccagcgcc
accgcccgacgcatcctgaagtctttggagaggatgtccagtcctctcgcagatgccaga
aggatcccggcaacaccatcgccatctttctcaatgtcggtggacggcggcgatcttgaa
gtgtcgcatttccagtccaaaaggaaacggatggattccaatctcccgccggtgcagaag
ctggtggtccccaacccccttttcacctcggcgaaccgctccgtctccttcaggccgagt
ttgaccccgaaagggcagagccggactctagaccggccccccagagacaagcccaccaga
caatcacctctactacctgacagaaaccccggcggcccttctcgaagcacaactggagcc
ggcggcgacggctaccccttgtccagcacgcccaccgccggcggctacggaggcggcaag
atgaagagggatcgaacgagcgcacgtccgtcctccaaacgcactgagaatgacgaggtg
gccgagctgccagaccttcccaccatttcacttcccatttgcacatccgccttgcccacc
ttcagcttctcctccccgctgccccccgtcgctaccatcgtcacccccagcgtcgctgtc
actccggccaaggaaatggccataaataaggcgacaaaggcttcacctccttgtgtgccc
tttaccttttcctcgcccattgtcaaggcgactcctacaagtctaccaaacttctctccg
acagttggctttacgttcagtgcccccgtaacaaagctcggctcttccatgtcaaatgga
aacttgggcttacctctagcaacagcagtgaaagtatcaacaaatacaagcacagaggac
tttgatgggcctttcaaaccagccaagacactaaagcagggcagcgtgctggacctcctc
aaagcacccggctttgcttcaacaactgcgcaaaagtcgtctgagaccaacacgcagtcc
gccgccccctctcccgcccccaccacctctgtctccttctcgtcatcctctacaggcctt
agtgacttatttaaaaaccctgcaggattgagctatgacgtctgcagggctcagaacaag
tccttggatacccagcacgtgagccgcacgtctcctcagccagggaacgcaaccaaggac
agtaaaacaagcgcaccctcttgtacgggaccaaagagcagcgcaaacgtcggcccgatc
gtctccaaaccggcggccaactgggagtgcgacacgtgtctggtcatcaacaagcccgag
tccgtcaaatgtgtggcctgcgagacggccaagcacggcacgggcctcaaggcctcgtct
tcgctgccctccgcctttacccccgcagaggaggccgccgggccggcccccccggcctcg
tccacgtcgccgtgtgccgcagtcggggacccgtttaagaaaccagagagcgcgtcggat
ggcgacgtttgtgcgttacagaacaaggccgctgatgcaaagagcgtgccctgcacgaat
gctaaaccaggagcagcagtttcccctgcagccagcagcgcgccgatcggcttcggggcc
aagaaacccgagagctcctgggagtgcgaagcgtgctggctgcagaacaagagcaccgat
ctcaagtgcgtcgcctgccaggcagccaaacctggagcgcaagtcaagccccaaggtact
tttccttctacctctaatgcaggaggtttcacgtttggcacttccaacagtacctcagag
tcgccgtctggagggttcaagtttggcgtggccgcgtcaaaagcaacctccgcctcgtcg
ggaggaatcaagttcggtgtcccgtttggaagcccctcatcggaagtttctcctaaagac
gctaatacctcgttagggttcaagttcagcaccccgtctgagggctttaaatttgggatt
ccccccggcgatgataaaaagccagaagagcccgcagtcggcgctggcttcaagttcgga
gccagcggcgggatatcgttcgggatgggatcgcccagcccggaaaacagcagctcctct
ttgaagactcccttcagctttggtcttccaaaacctgaagaaaaaacatcagcccccacc
tcgtcggcctccgctgccgtaaccacgcccgcttcctctcaagtaaagagcagcgacaac
ggcagagcgtcgtcagacaccgacacgaccgccgccgccagctctgtgttcgggacgccc
ggccaaggcgcctccacgacgccggtggcccccacctttggtttttcgtctgcccagaag
aagcccgccgctcccacgttcgcatttggaaaggcgaatgaggagaagagagagctgccc
gccgcctcggctccgtctcccttcatcttcggcggcgcgagcaaggacggcgacccggcg
cctgccgttccggggggcttttctttcggcaagccgagcgctccggcggagcagccgccc
gcttttattttcggaaaaccggcagacaagggcgacgcttccaattcgaatgctgcaaat
tcctcttttggactgggacaaagtgctgcagcttccgatggccccaaattgccgtttttc
ttcacgggaagcaacgccgccgccgccaccagcagcgcctcctccactccgaccgcaagt
ctctttggcagcggcacccaggcgcccgctctctccctccccccggctcccaccaccttt
ctgttcgggcaggccgcccccgccgccccggccgccggcgacgctcccccggccaaagct
tttgtcttcgggcagagccaggacacgccgtcgggcgcgccggtcaacccggccccggct
caggcggcgcaaccttttatctttggggcggcaccgggcgccgccgcgcccgccgtcgca
ccttccatcaattttggaggatcggggacgtcctcttccccatctccagctcgcaacccc
ttcctcgtcagctcgtcaaacccccccgagttccgggccggccagacgccggcgttcggc
tcgactttcggctcgccgttcccctcggcccctccgcaggccccggcgttcggcgccaaa
cccgccgcgcccgtcttcggccagcagaccaacgccgtgcccgtcttcggcgcccccgcc
gccgccgccaattcggctcaaggtggaggctttcagttcggaggggccagcgcgtttggg
tccaccaacagcacgggagttttcaatttcggagcagggacgacagcgtctccaactccc
tccgcccctgctggtggcggcttcaacttttcccaacctttagcattcaacatcgggtcg
tccaaatcctcgacgtcgtcacccgccagagagcaaacgatcgccggccgcaagatacgg
acggcggtgcggcgccggaaatag
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