Syngnathoides biaculeatus (alligator pipefish): 133502375
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Entry
133502375 CDS
T09681
Symbol
usp9
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbia01002
]
133502375 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133502375 (usp9)
Enzymes [BR:
sbia01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133502375 (usp9)
Peptidases and inhibitors [BR:
sbia01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133502375 (usp9)
Ubiquitin system [BR:
sbia04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133502375 (usp9)
BRITE hierarchy
Motif
Pfam:
DUF3517
UCH
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
133502375
NCBI-ProteinID:
XP_061679080
LinkDB
All DBs
Position
6:complement(19639752..19680409)
Genome browser
AA seq
2590 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQAPDAQSQPPLPQNQTSSPNSSNENSPVSPPGEHGQGDGPPQL
EEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIELSKKGLDVKCEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMATNP
HCKFHIYNGTRPSETVPAGAQLADDDLFARPPDPRSPKGWLVDLINKFGTLNGFQMLHDR
FMSGEALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIKMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHNPEEDEWLTAERMAEWIQQNQILSIVLRDSLHQPQYVEKLEKILRFVI
KEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASK
KQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSCS
QDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQKNPHVFYRHD
LINQLQNNHSLVTLVAENLSAYMETMRQFSKEEQAEFDPQIVRTGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAETAVFLCDREACFKWYSKLMGDEPDLDPDINKDFF
ENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWRVVIQ
GSDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKHITLIVRFPNQGRQVD
DLDIWSHTNDTIGSVRRGILNRIKANAAHTKIELFIGGEVVDPADDRKLIGQLNLKDKTL
ITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYGEGPNPEVESCLPGVIMSLHLRYISF
LWQVADLGCQLNMPLLRDGARVLMKLMPPDNTTVENLRAVCLDHAKLGENSLSPSLDSRF
FGPSPSQVLYLIEVVYALLMPASATLGEDASDFQYNFLKSGGLPLVLSMLTRNNFLPSAD
METRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPNAEGNIPVSPINQATHDQALVLQS
ALQNIPNPASECMLRNVAIRLAQQISDENFFQTSKSIPDICVIRAVQKIVWASGCGTVQL
VFSSNEDISKIYEKTNAAKEPDGEDEQVCCEALEVMTLCFALMPTALDTLSKERAWQTFI
IDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGTTAKERAKHAGDYF
TLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGETGVEETILEGHLGVTKE
LLAFQTPEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQYMKSGEFPTEQAIPVCSTPA
SINAGFELLVALAVGCLRNLKQIVDTLTDMYYLSCETLTEWEYLPPVGPRPNKGFVGLKN
AGATCYMNSVIQQLYMIPPIRNGILAIEGTGTDVDDDMSGDEKQENETNVDPRDEVFSYH
HQFDDKPGSKAEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLRE
QHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTLNV
DIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRFDY
DWERECAIKFNDYFEFPRELDMEPYTVAGVAKMEGDDVNPENQVIQQNEPTEPTPVGSSK
YRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKMDDEEEMKNQCYG
GEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDKDSELVKYISELTISTAKPHQV
KMPGVIECSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNPPPGQDHLLPEAEDIA
MISAQLAARFLFSTGFHTKKVVRGPASDWYDALCILLRHSKNVRYWFAHNILFAYPNRFS
EYLLECPSAEVRGAFAKLVVFIAHFSLQDGPCPSPTASPGTSAQGCDNLSLSDHLLRAVH
NLIRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLNVPATFMLVALDEGPGPPIKYQ
YAELGKLYTVVSQLVRCCDVSSRMQSSINGNPPLPNPYGDANLTAPVMLIQQMVAEILFV
RTSYVKKIIEDCSNSEETVKLLRFSCWENPQFSSTVLSELLWQVAYSYNYELRPHLDLLL
QILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSNCSVA
YQILQSNTDLKRKWTWAVEWLGDELERRPYSGNPQYTYNNWSPPVQSNETSNGYFLERSH
SARMTLAKACELCPEEEPDEQEAPDDQDSSPPEDTSLYPHSPGTAQFQQNNHPHGQPYTG
PAAQHMNNPQRPGPASAPTPAPAPAQAPAPAGPGQGPGTGPRAQENRENVEEPAPAPVPV
PAPASVPSKE
NT seq
7773 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacgcgtggctctccggtggggggcaatgacagtcaaggccaggcgcct
gacgctcagagccaacctccattgccacagaaccagacttcatctcctaactcatctaat
gagaactctccagtgagcccaccgggcgagcacgggcaaggggatggcccgccccaactg
gaggaggaggagcctgctttccctcacactgacctagctaagctagacgacatgatcaac
aggcctcgttgggtagttccagttttgccaaaaggagaattagaagtcctcctggaggcc
gcgatagagctcagtaaaaaaggactggatgtgaagtgtgaggcgtgtcagaggtttttc
cgagatggtctgactatctcgttcacgaagatcctcacggatgaggcagtcagtggctgg
aagtttgaaattcaccggtgtatcatcaataacacccaccgcttggtggagctgtgtgtg
gccaagctctctcaggactggttccctctactcgagctgctggccatggctaccaaccct
cactgcaagttccacatctacaatggcacgcggccctcagagaccgtccccgccggagca
cagttggccgacgacgacctatttgcgagaccgccagacccgcgctcgcctaagggctgg
ttggtggacttaataaataaatttggcacgttaaacgggtttcaaatgttgcacgatcgc
ttcatgagtggcgaagcactgaacgtccagatcatcgctgcacttatcaagccttttggc
cagtgttacgagttcctcaccttgcacacagtgaagaagtacttcctccccgtcatcaaa
atggtcccccagttcctggagaacctcacggacgaggagcttaagaaagaggccaagaat
gaagccaaaaatgacgcactgtccatgataatcaagtctctgaagaatcttgcgtcccgt
gtacccgggcaagaggagactgtgaagaatttagagatttttaggttaaaaatgatactt
aggttattgcaaatttcttcttttaacggcaaaatgaatgcactaaatgaagtcaacaag
gtgatctccagcgtgtcgtactacactcatcggcacaacccggaggaggacgaatggttg
actgcagaacgcatggcggagtggatccaacagaaccagatcctgtccatcgtcctgagg
gacagtttacaccagcctcagtatgtcgagaaactggagaagatccttcggttcgtgatc
aaggagaaagcgctcaccatgcaggatcttgacaatatctgggcggcacaggctggcaaa
catgaggccattgtgaaaaacgttcatgacctcctggctaaactagcctgggatttctca
cctgagcagctggatcatctatttgactgtttcaaggcaagctggacgaacgccagcaag
aagcagcgcgagaaactgttagaacttatccgccgccttgccgaagacgacaaggatggt
gtgatggcccacaaagtgctcaatctactgtggaacctggctcacagcgacgacgtgcct
gttgatatcatggatcaagctcttagcgctcacattaaaatcctagattacagctgctcc
caggacagagacacccagaagatccagtggatcgatcgcttcatagaggagctgcgaacc
aatgacaaatgggtgattcctgccttgaagcaaatccgagagatctgtagcctttttgga
gaagctccacaaaacttaagtcaaacccagaagaatccacacgtgttttaccgccatgac
cttatcaatcagctgcaaaacaaccattccctggtcacgctggtggctgagaacctgtcc
gcctacatggagacgatgcgacagttctccaaagaagaacaggcagaatttgaccctcaa
atagtccgaacaggaagccgctacagccacgtccaggaagtgcaggaaagacttaacttc
ttgaggttcctccttaaagatggccagctctggctctgtgcaccccaagccaagcagatc
tggaagtgtctggccgagaccgccgtcttcctctgtgaccgtgaggcctgcttcaaatgg
tactccaaactgatgggcgacgaacccgatcttgaccccgacatcaacaaggacttcttt
gagaataatgtcctgcagctggacccgtccctcttgacggagaacggcatgaagtgcttt
gaaaggttcttcaaggctgtcaactgcagagaggggaaattggtggcaaaacgtagggcc
tacatgatggacgacctggaactcattggcctggactacctgtggagggtcgtaattcaa
ggaagcgatgacattgccagcagagcgatagacctgctgaaagagatctacaccaatctt
ggaccaaagttacaagtcaaccaggtggaaattcatgaagattttatccagtcgtgtttt
gaccgtctgaaggcgtcctacgacactctgtgcgttttggacggagataaagatagcatc
aactgtgcccgccaggaggcgatccgcatggtgcgagttctcactgtgctcaaggagtac
atcaatgagtgtgacagcgactaccacgaggagaggaccatcctgcccatgtcgagggcc
ttccggggaaaacacatcacgttgatagtgcgcttccccaaccaggggcggcaggtggat
gatctggacatttggtcgcacaccaacgacacgattggctcagtgcggcgcggcatcctg
aaccgcatcaaagccaatgccgcgcacaccaagatagaacttttcatcggaggggaggta
gttgaccccgctgatgaccgaaagctgattggacagctcaacttgaaggacaaaacgctg
atcacagccaagctaactcaagtgagcgccaacatgccgtccagcccagatagctcttcc
gactcctccaccggatcgcccggtaaccacggcaaccattacggcgaggggcccaaccct
gaagtggagagttgtcttcctggcgtgatcatgtcgctgcacctgcgctacatctccttc
ctgtggcaggtggccgacctgggctgtcaactcaacatgcccctccttcgagatggcgca
agagttctcatgaaactcatgccacctgataacaccactgtggaaaatctgcgcgctgtg
tgtttggaccacgccaagctcggggagaacagcctcagcccttcactggattctcgtttc
ttcggcccttcgccctcccaagtgctctacctcattgaggttgtgtatgctttgctaatg
ccagccagcgccactctgggcgaggatgccagcgactttcagtacaacttcctgaagagc
ggtggcttgccgctcgtgttgagcatgctcacccggaacaacttcctgccgtcggctgac
atggaaacgcggcgtggggcttacctcaacgcgctgaaaatagccaaactcctcctcacc
gcggtaggctttgggcacgtgaaagctgtggcggaggcctgccagcccaacgctgaggga
aacatccccgtttccccgattaatcaggccactcacgatcaggctctggtgctgcagagc
gctctgcaaaatataccaaatcctgcctccgaatgtatgctgcgcaatgtcgccatccgc
ctggcacagcagatttctgatgagaattttttccagacatcaaagtcgattcctgacatc
tgtgtgatccgagcggtgcagaaaatagtttgggcatcaggctgcggcacagtgcagctg
gtcttcagttctaatgaagatatcagcaagatatacgagaagacaaatgcagcaaaggaa
ccagacggtgaagacgagcaggtgtgttgcgaggccttggaagtgatgacgttgtgtttt
gccctgatgcccaccgccctggacacgctcagcaaggagagggcttggcaaacttttatt
atcgacttgctgctacactgccacagcaaatctgtccgtcagatggcacaggagcagttt
ttcctgatggcaaccaggtgctgtatgggccacagacccctcctcttcttcattaccctc
ctttttacagtgctggggaccaccgctaaggagcgagctaagcacgccggggactacttc
actttgctccggcatcttctaaactatgcctacaacagcaacatcaacctgccaaatgct
gaggtgttgctcaacaatgaaatcgactggctcaaaaggataagggatgaagtcaagagg
acaggggagaccggcgtggaggagaccatcttggaaggccaccttggtgtcaccaaggag
cttctcgccttccagactcccgagaagaagtattacattggctgtgagaagggaggagct
aacctcataaaggagctgattgacgacttcatcttcccggcgtcaaacgtttacctgcag
tacatgaagagtggcgagttccccacggagcaggccatcccagtgtgcagcaccccggcc
tccatcaacgccggctttgagctcctggtggcgcttgctgtcggctgtctgcgcaacctc
aagcaaatcgttgacacgctcacggacatgtactatttgagctgtgaaactctgacagag
tgggaataccttcccccggtagggccgcggcccaataaaggctttgtgggtctgaagaac
gccggggctacgtgttacatgaactctgtaattcagcagctgtacatgatccctccgatt
cgcaacggcatcttagccatcgagggcacgggcaccgatgtggacgatgacatgtcggga
gacgaaaagcaagagaatgagaccaacgtggatcctcgcgacgaggtgttcagctatcac
caccagtttgacgataagcccggcagtaaagcagaggacagaaaggagtacaacatcggg
gtgttgcgtcacctgcaggtcatctttggccacctcgctgcttccaggcttcaatactat
gtcccgaggggcttctggaaacaattcaggttgtggggtgagccggtgaatctaagagag
caacatgacgctttagagtttttcaattctttggtggatagtctggatgaagcactgaag
gccttgggtcatcctgctatgctcagcaaggttctaggaggctcttttgcagaccagaag
atctgtcagggatgccctcacagatacgagtgcgaggagtcattcacaacacttaatgta
gacatcagaaaccaccagaaccttttggactccatggagcagtacgtgaaaggagacctt
ctggagggcgccaatgcataccactgtgagaagtgtaacaagaaggtggacactgtgaag
cgtctgctgatcaagaagctgccgccggtcctcgccatccaactgaaacgcttcgattac
gattgggagcgggaatgcgccatcaagttcaacgactactttgaattcccgagggagttg
gacatggagccgtacacggtagccggcgtggccaagatggagggtgacgacgtgaacccg
gagaaccaagtgattcagcagaacgagcccacggagcccacgcccgtgggcagctccaaa
taccgtttggtgggggtgctggtccactcgggccaggccagcggcggacattactactcg
tacatcatccagaggaacggcggcgacggagagaaaaaccgctggtataagtttgacgac
ggtgatgtgaccgagtgcaagatggacgatgaggaggagatgaagaaccagtgctacggt
ggcgaatacatgggcgaagtgtttgatcacatgatgaaaagaatgtcgtaccgcagacaa
aaacgctggtggaacgcttacatccttttctacgagcgtatggactctcttgacaaggac
agtgagcttgtcaagtacatctcggagttgaccatctccaccgccaagccgcatcaggtc
aagatgcccggcgtcatcgagtgcagcgtccgcaagcagaacgtccagtttatgcacaac
cgaatgcaatacagcctggaatatttccagttcattaagaaacttctgacctgtaacagt
gtctatttaaaccctcctccaggacaagaccatcttctgcccgaggcagaggacattgct
atgataagtgctcagctggctgctcgctttctttttagtacaggctttcacaccaagaaa
gtagtcaggggtcctgccagtgattggtatgacgctctctgcatcctgctgagacacagt
aagaatgtacgctactggtttgcacacaacatcctgtttgcttaccccaaccgcttctct
gagtacctgctggagtgcccgagcgccgaggtgcgcggcgcctttgccaagctcgtcgtc
ttcattgctcacttctccctgcaagacggtccttgcccctcccccactgcctcgcctgga
acctctgctcagggttgtgataacctcagtctaagtgaccaccttttaagagctgtccac
aacctgatcagacgagaggtttctgaacacggccgtcacctgcagcagtactttaacctc
tttgtcatgtacgccaatcttggcctagcagagaagacccaactgctgaagctgaacgta
cccgccactttcatgctagtcgctctggatgaaggtcccggcccccccatcaagtaccag
tacgctgaactgggcaagctgtacacggtggtctcccaactggtccgctgctgcgatgtg
tcttcgcgcatgcagtcctccatcaacggcaaccccccgctgcctaacccttacggggac
gccaacctcacggcccccgtgatgctgatacagcagatggtggccgagattctgtttgtg
aggaccagctacgtgaagaagatcatcgaggactgcagcaactctgaggagactgtgaag
ctgctccgcttcagctgctgggaaaaccctcagttttcctccacggtgctcagtgagctt
ctgtggcaggtggcgtactcttacaactacgagttgaggcctcacttggacttgctgctc
cagatccttctcattgaggactcgtggcagacacacaggatccataacgtgctgaaagga
attccagatgacagggacggcctctttgacaccatccagcgttccaagaaccactaccag
aaacgggcctaccaatgcatcaagtgcatggtggccctcttcagcaactgctccgtggct
taccagatcctccagagcaacacggacctgaaacggaagtggacgtgggccgtggagtgg
ctgggcgacgagctggagaggaggccgtactccggcaaccctcagtacacctacaacaac
tggtctcctccggtccagagcaacgagacgtccaacggctacttcctggagcgctcccac
agtgcccgcatgaccctcgccaaggcctgtgagctttgccctgaagaggagcccgatgaa
caggaagcccccgacgatcaagactcgtccccgcccgaggacacctctttgtacccgcat
tctcccggaaccgcacagttccagcagaacaaccaccctcacgggcaaccgtacaccggg
ccggccgcgcagcacatgaacaatcctcagcgccccggccccgcgtcggctccgaccccg
gccccggcccccgcgcaggccccggcccccgccggccccggccagggcccgggcacgggc
cccagagcacaagagaacagggagaatgtggaggagccggccccggccccggtcccggtc
ccggccccggcatcggtcccgtctaaggagtaa
DBGET
integrated database retrieval system
