Syngnathoides biaculeatus (alligator pipefish): 133507420
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Entry
133507420 CDS
T09681
Symbol
prdm2b
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia00310
Lysine degradation
sbia01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
133507420 (prdm2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133507420 (prdm2b)
03036 Chromosome and associated proteins [BR:
sbia03036
]
133507420 (prdm2b)
Enzymes [BR:
sbia01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
133507420 (prdm2b)
Transcription factors [BR:
sbia03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
133507420 (prdm2b)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
133507420 (prdm2b)
BRITE hierarchy
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-C2H2_6
zf-C2HE
zf-H2C2_2
zf-C2HC_2
zf-C2H2_jaz
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
133507420
NCBI-ProteinID:
XP_061688392
LinkDB
All DBs
Position
10:complement(16139997..16151612)
Genome browser
AA seq
1450 aa
AA seq
DB search
MWDGEQGVKEEDERPLATATSKVPPTEMTDHGDVQVVSGDVMDGANHEEEDTNDLQAAHE
AQQQIPQRQPDFPLRGIGKSQSQSSPLHGQDQEVDTDPDFDPLLEGDPHGDSFPCQHCER
HFSTRQGLERHIHIHAVSSQQTPLFKCRYCSKAFGSQVGRRRHERRHESGFKKKPGSLAG
TAHLLGPLSQTDVSIPDCTGPTSHYTTIGSQLTGGPAYQSETPRKESGAHSDPPFILEEN
GASKELHPCKYCNKAFGTHTNMRRHQRRIHERHLLPKGVRRKGMLLQEASAQPRPDASPN
ASPALVYMPSADTEDEADRDDYAVDISKNISENLSFYIDGKIVSTNTVSSCEVIELDTRS
AALLGLDTVLIGPTQFSQALKVEPRANTAKQLSNLCQPSSKRRTSTPPLVPSLKVETETA
PFTGSSSSTTLSSPNLLVGGLLQQAADSLGSQREKTVYLSPKLKQLLQTQDVQKSITLIS
ESHRLVSPLSVTPLQGPSGRFKRRTASPPSSPQLSPPFKTDGCKAEAVSSYPIKVPKLEN
LIVSPHVNSLDKDETINLSPCGSNLGQTSSGSGGNACNQQPLDLSNTVNRRSDTSNKVLG
DSALDLSLHRKSSADLDLKGSAAPQLQVKKRKPNTSMLEKVLMNEYIGLPLPTEEGPSPL
SNLSFQPQSPSIESAHPSPPSLTPVTMNPSSPGTSSVTSATPPPPVLPTMPSPPAIANSP
LSQPSDPSAQRALPVLSPKVSPRSPQLPTEDVESLYAGDDKDEEEQHHSETLDSPNTPLQ
DPLDHPVPLEPSSSVSLSATEDISLTEANSSQLNGETDKDLNSGTPKSENSDLAALSPRP
ESLPTLPPHVSDDPAPLLLPQSLPHAKIKEEPEHCTDDVSVMTHVPQDDAVPSPQPLENK
PDNPPVAGQMDSVYCKTFVCNVCNSPYSSMKELSGHIAEHASAWPFKCEFCLQLFGDAEA
LLAHRTTLHGVGTIFVCSICSKEFAFLCNLQQHQKDLHPNDACTHTSVESGKLRPQNYTD
PSRAKEDTSTPAQQTSEEAPEQNEAKPVKEEPDVNGNHADDGTEDPNEELYTTIKIMASE
GGKPKGPDVRLGQNQHYPSYKPPPFPYHSRSHAGSMASATNFTTHNIPQTFTTAIRCTKC
GNSFDNMPELHQHILACANASDKKRYTPKKNPIPLKQIVKSPNGVTSPSAGQSAFRRMGQ
PKRLNFNPDVGKTKMSALSKKKNQLVQKAISQKNKAATSAKKVAVKVEEEQNNVCPHCSR
EFTYQASLSKHMAVSCPMKPAVKKGNKKPDDKSIRKKDSEMAQMETELKTFGKTRARSSG
AAEHPEPPQSGKGRSVQKRPTSFPVATPPASKKAKKGPAQPSPTDLPNDTAAQKPPVKMQ
RMGKEVPKRLAEPKSPPLQPKKEERFSLRMRERLGGPVTRSSQMAPPAAEAKSEDAPTSE
PKDAPEVLMK
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgtgggatggggaacaaggtgtgaaggaggaggatgagaggccactcgcaacagcgacg
tccaaagtcccgcccacggaaatgactgaccacggagacgtgcaggttgtgtcaggcgac
gtgatggacggggcaaatcacgaggaggaagacactaatgatttgcaggctgcgcatgaa
gcacagcagcaaatacctcagcggcagcccgacttccccctcagaggtatcggaaaaagc
cagtcgcagtcttccccgcttcacgggcaagatcaggaggtcgacaccgatcccgacttc
gaccctttgcttgaaggggatccgcacggagattcatttccctgtcagcactgtgaacgg
cacttctccaccaggcagggtctggagcgccacatacacattcacgccgtcagcagccag
cagacaccactgttcaagtgccgttactgtagcaaggcctttggctcacaggtgggtcgg
cggcgccacgagaggaggcacgagagcggcttcaagaagaagcccggctctttggccgga
accgctcatttgctcggccctttgtcgcagacggacgtttccattcccgactgcaccggc
cctacgagtcactacaccactattggatcgcagctcactggaggacctgcataccaatct
gaaaccccaaggaaggagtcgggggcccattctgaccctcccttcattttagaagaaaac
ggagcatccaaagagctccatccttgcaaatactgtaacaaagcgttcggcacacacaca
aatatgaggcggcaccagcgcagaatacacgaacgacacttgttaccgaaaggcgttcga
cggaaaggcatgctgctgcaggaggcgtcagcgcagccgcgacctgacgcctcgcccaat
gccagccctgcccttgtgtatatgcccagtgctgatacggaagatgaggcggaccgggac
gattacgctgtggacatctccaaaaacatctcagagaatttaagtttttacattgacggc
aagatagtgtccacaaatacggtcagcagctgtgaggtcatcgagctggacactcgatcg
gctgccctgttgggtttggacacagtcctcatcggtccaactcagttcagtcaggcactg
aaggtggagcctcgagccaatactgccaaacaactgtccaacttgtgtcagccttcatcc
aaaagaagaacttcaacacccccccttgttcccagcctcaaagtcgagacggaaacggct
ccattcacagggtcttcgtcatccacaacattgtcttcgcctaacttgctggtggggggc
cttctccagcaagcggcggattcattgggatcccaacgtgagaaaacagtttatctgtct
cccaagctcaagcagctcctccagacacaagacgttcagaagtccatcacgctcatatct
gaaagccataggctggtgtcccctctttctgtcacgccgctgcaaggtccttcgggccgg
tttaaaaggcgaacggcctctcccccgtcctcaccgcagctcagtcccccgtttaaaact
gatggctgcaaggctgaggcggtgagctcgtaccccattaaggtgccaaagctagagaac
ctcattgtctcccctcacgtaaactcactggacaaggatgagactataaacctgagcccc
tgtggaagtaaccttggccaaacctcctctggcagcggagggaacgcttgcaatcagcaa
cccttggacctgtcaaacactgtcaatagaagaagcgacacctccaacaaagttcttggc
gattctgcactcgatttgagcttgcatcggaaaagtagtgccgatctggacttaaaggga
agtgcagcaccccagctgcaagtcaaaaagaggaagccaaacaccagcatgcttgaaaag
gtgctgatgaacgagtacataggtttgcccttgccgacagaggagggaccctcgccgctc
tctaacctcagttttcaaccgcagtctcccagtattgagtctgcccacccctctcctcca
tccttaacccctgtcactatgaacccctcctcacccggcacctcgagcgtgacgtctgca
acgccgcctccccctgttctacccaccatgccttcgccgccagccatagcgaactcgcct
ctctctcaaccctcagacccttcggcgcagcgggctcttcctgtcctatcaccaaaggtg
tcgccgaggtcgccgcagctcccgacggaagacgtggaaagtttgtacgccggtgatgac
aaagacgaggaagagcagcatcattctgagacactggactcccctaacactccactccaa
gatccccttgatcatcctgtacctcttgagccttcttcttcagtcagcttgtccgcgaca
gaagacatttctctgaccgaggcaaacagcagccaactaaatggcgaaactgacaaagac
ctcaactcaggaactccaaagtctgaaaactccgacttggctgctctgtcaccccggcca
gagtctttgccgacattgccccctcacgtgtcagatgacccagcgccgttgctgcttcca
caaagccttcctcatgcaaagataaaagaggagcctgagcattgcacagatgatgtttct
gtcatgacccatgtgcctcaagatgatgctgtcccgtcacctcagcctctcgaaaacaaa
cctgataatcccccagtggccggacaaatggactctgtttactgcaagacttttgtatgc
aacgtttgcaacagcccatacagctccatgaaggagctcagcggacatattgccgaacac
gcgtcagcttggcccttcaagtgcgagttctgcctgcagctgtttggcgacgcagaagcc
ctgctcgcccaccggaccacgttacacggggtgggcaccatattcgtatgctccatttgt
tccaaggagtttgcctttctctgcaatttgcaacaacaccaaaaagatctgcatccaaat
gatgcctgtacacatacctctgtggagagtggtaaactcaggccacaaaactacacagac
ccatccagagccaaagaagacacatccacaccagcacaacagacttctgaagaagcgcca
gaacaaaatgaagctaagcccgtaaaggaagagcctgatgttaacggaaatcacgcagac
gatggcacggaggaccccaatgaggagctctacactacaataaagatcatggcgtctgaa
ggcggaaagcccaaaggccccgacgtccgcctcggtcagaatcagcattaccccagttac
aaaccaccccccttcccgtatcacagccgttcccacgccggttccatggcctccgcgaca
aactttaccacacacaacataccgcaaacgttcaccaccgccatccgctgcaccaagtgc
ggcaacagctttgacaacatgcctgagctgcaccagcacattttggcctgcgccaatgcc
agtgacaagaagcgctatactcccaaaaagaaccccatccccctcaaacaaatagtcaag
tctcccaacggagtcacgtcaccctcagcaggccagagtgccttccgaagaatgggccag
ccaaagagacttaattttaatcctgacgtgggcaaaacaaaaatgagtgccctcagtaag
aagaaaaaccagctggtccagaaggctatttcacaaaagaataaggccgccacctctgca
aaaaaggtcgccgttaaagttgaagaggagcaaaataacgtctgcccccactgcagtcgg
gaattcacttatcaggccagtctcagcaagcacatggccgtcagctgccccatgaagccc
gccgttaaaaaggggaataaaaagcccgacgataaaagtataaggaagaaagacagtgag
atggcgcaaatggagacggaactcaaaacctttggaaagacgagagctcgtagctccggt
gcagctgagcatccggaaccccctcagtcgggtaaagggagaagtgtgcaaaagaggcct
acgtcgttcccggtggcgacccctcccgccagcaaaaaagccaagaagggcccagctcag
ccatcacccactgacctacccaatgacactgcggcgcaaaagccacctgtgaagatgcag
cgcatgggcaaagaggttcccaagaggctagcagagcccaagtcgccgccactgcagccc
aagaaagaagagcgcttctccctccgaatgagggagaggctcggcggtccagttaccagg
agctcgcagatggcaccccccgcagcggaggccaaatctgaggacgcaccaacgtctgag
cctaaagatgctccggaggtgctaatgaagtaa
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integrated database retrieval system
