Syngnathoides biaculeatus (alligator pipefish): 133508905
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Entry
133508905 CDS
T09681
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38-like
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133508905
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133508905
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133508905
BRITE hierarchy
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
133508905
NCBI-ProteinID:
XP_061691427
LinkDB
All DBs
Position
11:740178..760213
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AA seq
633 aa
AA seq
DB search
MDPPRTRSRSRSGFYHFAVNNPAGGNSGGNGSTMSASGGGGGMGFSQQSNAGWAPHHGGR
GGYSDSQPQQPGTYLAAGVQRHGVHRHPGTGGVLHFHPDNVFSEDRDKIEESPSPKRQRL
SQQSILDLSSIPSSTPSSPIRPWELPPSRRSHGHYTPERCHTPVRNRRSPPMRRPRARRD
WLTRHHHSHNHHHHYNNNSSSNHHNSNTHPHHHHHHHHHHLHSHLGLSPGHQDENYRHPG
QPQGYPPYGQQPPRGVGPVIEERQVYHPPNPSPRPLHPSSNLSPRLLHPAAHPQHPISSQ
QQSSGMLDLQEQVSAPVSYPASPPGVPPGLPPRSVSQQIPACSLVFNGQHYPVCSVAPSV
LQTCSVQHLPIPYPFPSLLSSDQAFLLPPPPHLPHPPTHLSHHPPQVPQTGQFGPYTTPQ
ARSPLQRIENDVELLGEHLSLGAGLHYPPAPHPALASHSTQLHFLSHEPLSQEFFGVSYP
NFIPRRLAGRRYRSQQPLPPSPYHPSFLPYFLSMLPVQPTGPAISLELDVDDGEVENYEA
LLNLAERLGEAKLRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMSDFESRQLLRVLPCS
HEFHGKCVDKWLRANRTCPICRADASEVQRDSE
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggacccaccaaggacgcgttctcgatccaggtccggcttctatcatttcgccgtgaac
aaccccgctggaggtaacagtggcggtaacgggagcacgatgagcgccagcgggggagga
ggagggatgggcttctcgcagcagagtaacgccggctgggccccgcaccacggcggccgt
ggcggctattctgacagccagccgcagcagcctgggacttacctggccgcgggggtccag
cgccacggagtgcaccggcaccccgggacgggaggagtgctacactttcatccagataat
gtgttcagtgaggatcgggacaaaattgaagaaagcccaagcccaaaaaggcagcgtctt
tcccaacagtccattttagatctaagctccataccttcctcgaccccttcatctcccatt
cgcccctgggaactcccccctagtcgcagatcgcacggccactacacaccagagcgatgt
cacacacctgtccgcaatcgaagaagccccccaatgaggcgcccgcgtgcccgcagagac
tggctgacacgtcatcaccactcgcacaatcaccaccaccattacaacaacaacagcagc
agcaaccatcacaactccaacactcaccctcaccatcaccaccaccaccaccatcatcat
ctgcattcccaccttgggctgtcaccgggtcatcaagatgagaactaccgtcacccaggc
caaccgcagggctacccaccctatggccagcagcctcctagaggggtgggccccgtaatt
gaagagcgccaagtttaccatcccccaaatccctccccaaggccccttcatccatcttca
aacttgtctccacgactgttgcaccctgctgcgcatcctcagcatccaatctcatcacag
caacagagcagtgggatgttggacctccaggagcaggtttcagctccggtgtcgtatcca
gcatcgcccccaggggtgccacctggtctgccacctcgttcagtctcacaacagatcccg
gcatgctcattagtcttcaatggacagcactatcctgtctgcagcgttgccccatctgtc
ctgcagacttgttctgtgcagcacctacccattccctacccgttcccttctctgctgtcc
agtgaccaagccttcctcctcccccctcccccccacctcccacatcctcccacacacctt
tcccaccatccacctcaggtgccgcagactggacagtttggaccttacacgacaccgcag
gcccgatcacctttacagaggatagagaatgatgtggagctgctgggagagcatttgtct
ttgggcgcagggctccattaccctcctgccccccacccggctctcgcgtcacattccaca
cagctccacttcctttcccatgagcccctgtcccaggagttctttggagtgtcctacccg
aacttcattcctcgtcgcctcgcgggccgaaggtaccgttcgcaacagccactaccgcct
tcgccttatcaccccagcttcctgccttacttcctttcaatgctgccagtccagccaact
ggccctgcgatcagtcttgagctggatgtcgatgatggagaagtggaaaattacgaggcc
ctcctcaatcttgctgagcgcctcggggaggccaaactcagaggactcaccaaggctgac
attgagcagcttccttcctatcgcttcaatccaaataaccaccagtctgaacagacactg
tgtgtggtgtgtatgagtgattttgagtcccgacaactgctgcgagttctgccctgcagc
cacgagttccacggcaagtgtgtcgacaagtggctgagggccaatcggacatgtccaatt
tgtcgggccgacgcctccgaagtccagcgagactctgagtga
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