Syngnathoides biaculeatus (alligator pipefish): 133508950
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Entry
133508950 CDS
T09681
Symbol
pcdh19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sbia04515
]
133508950 (pcdh19)
Cell adhesion molecules [BR:
sbia04515
]
Cadherins
Protocadherins
133508950 (pcdh19)
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Motif
Other DBs
NCBI-GeneID:
133508950
NCBI-ProteinID:
XP_061691520
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All DBs
Position
11:27810348..27880064
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AA seq
1091 aa
AA seq
DB search
MEFIHLIVLLLLFWVGGEAVINLKYGINEEMKPGSVIGNVTKDALKQGFQIAPQPPYLRV
ISNSEPRWVELSPAGILTTQMKIDRDIVCRQNPKCIISLEVMSNSMEICVIKVEIEDLND
NSPRFPTSHIDIEISENASPGTRFPLEGASDPDSGVFGVQSYSITPNELFGLEIKTRGDG
SKIAELVVQKSLDRETQSHYTYEISAEDGGDPPKIGAVQLNIKVIDSNDNNPVFDESVYT
VNVMENSPINTLVIDLNATDPDEGTNGEVVYSFNSYVTEKTRDAFKIDSRTGIITVNGVL
DYETAQIYEIDVQAKDLGPNSIPAHCKVTVNVMDTNDNPPVISLLSLNTEMVEVSENAQR
GYVIALVRVSDKDAGANGKVQCRLQGNVPFRLQEYESFSTILVDGRLDREQKDTYNLTIQ
AEDSGVPPLRATKSLVVKVADENDNPPHFLKPHYQEMVMENNLPGSCLLAVSAEDPDLGM
NGTVSYSIVPGEIKHMDVNTYVSINPSGRIYSMRSFDHEYTRTFDFKVLARDNGNPSLSS
NATVRIVVLDVNDNTPVMTNPPLVNGSADVSIPRNAGAGYMVTRVKADDYDEGENGRLTY
TISEGDRAFFEIDQVNGEVHSTRMFSENAKSSYEITVVARDHGKPSLSASAYIVVYLSPD
LNAQETIGAVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCSFFYLRRVAE
YSYGNQKKSSKKKKLSKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQSLPLGCR
RSESTFLNVENQNSRNAAPNHGYQHPFTGQGHQQPDLIINGMPLPETENYSIDSSYVNSR
AHLIKSTSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGHYVDTAVNDMLNMTVPPNVCQL
PDQAGEPAEGFHCQDECRILGHSDRCWMPRVPLPARVKSPEHARNVIALSIEATTVDVPH
YEDGTTKRTFATFGKDGPEDVERGDVKGKRTHEPQVCSPKANGGAVREAGNGREAASPIT
SPVHLKSPMSKPSSGYNTLKCRDAERIANHSLLRQPEGKDSEPSVREFNTLLHDGRDKES
PSSKRLKDIVL
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggaattcatacatttaattgtgctgctgctcttgttttgggtcggcggggaggctgtc
attaacctcaagtatggaataaacgaggagatgaagcccggctctgtgattgggaacgtg
acaaaggacgcgctcaaacaaggcttccaaatcgcgccacagccgccctacctgcgggtc
atatccaattcggagccacgctgggtggaactcagcccggccgggattctcaccacacaa
atgaagatcgaccgggatattgtgtgccgccagaacccaaagtgcattatttctctggag
gtgatgtccaactctatggagatatgcgtcattaaagttgaaattgaggatttgaatgac
aactctccgaggttccctacaagccacattgacatcgagatctcggaaaacgcatccccc
ggaaccaggtttcccctggagggggcaagcgatccagattcaggcgtctttggagtgcag
tcctactccattacccccaacgagctctttggattggaaataaaaacacgaggggacggc
tccaaaattgcagagcttgttgtgcaaaaatcgttagaccgagagacccagtcccactat
acttatgaaatcagcgcggaggatggaggagatccgccaaaaataggtgcggttcagtta
aatatcaaagtcattgattcaaatgacaacaaccctgtttttgatgagtctgtgtacact
gttaatgtcatggagaattcacccatcaacactctggtcatagacttaaatgcaacagat
cctgatgagggcaccaacggagaggtggtttactcttttaacagttatgtcacagagaag
acgagagatgctttcaaaattgattctcggaccggtatcataactgtcaatggtgtttta
gattatgagactgcccagatctacgagattgacgtgcaggccaaagatttgggtcccaac
tccatacccgcacactgcaaagtcaccgtgaacgtgatggacaccaacgacaacccgcct
gtcatcagcctgctctctctcaacacggagatggtggaggtgagtgagaacgcacagcgt
gggtacgtcattgccctggtgcgtgtctccgacaaagatgcaggggccaacggcaaggtg
cagtgccggctccagggcaatgtccccttccgactgcaggagtatgagagcttctccacc
atccttgtggacggtcggctggaccgcgaacagaaagacacatacaatctgaccatccaa
gctgaggacagtggcgtcccacccctgcgcgccaccaagtcgctggtggtcaaagtggca
gatgagaacgacaacccgccgcacttcctcaagccgcactatcaagagatggtgatggag
aacaacttgcccggctcatgcctgctggccgtctcagcagaagaccccgacctaggcatg
aatggaactgtttcatactctattgtccctggtgagattaagcacatggatgtcaatacg
tatgtgagcattaatccatcgggccgcatttactccatgaggtcctttgatcacgagtac
acaaggacttttgactttaaagttctcgcccgagacaacggcaatccctccttgtcgagc
aacgccactgtgcgaatcgtagtgctggacgtcaacgataacacaccagtgatgaccaac
ccacctttggtgaacggcagcgccgatgtgtccatcccgaggaacgctggcgcgggctac
atggtgacccgtgtgaaggccgatgactatgacgaaggcgagaacggtcggcttacctac
accatctcagagggtgatcgggccttctttgagattgaccaagtcaatggagaagtgcac
tccacccggatgttcagtgagaacgccaagtcctcctatgaaatcacagtggtagcccga
gatcacggcaagccatcgctgtctgcctcggcctacatcgtggtatacctgtcaccggac
ctgaatgcccaagaaaccattggagccgtcaacctgtccctcatcttcatcatcgctctg
ggctccatcgccgccatcctctttgtcacgatgatttttgtggcagttaagtgcaagcgg
gataacaaggaaatccggacctacaactgcagtttcttctacttgcgcagggtggctgag
tactcctatggcaaccagaagaagtcaagtaagaagaagaaactgagcaagaacgacatc
cgcctggtgccacgagatgtagaggagacagacaaaatgaacgtggtgagttgctcgtca
ctcacctcctcgctcaactacttcgactaccaccagcagagcctgccgctgggctgcagg
cgctccgagagcacctttctcaacgtggagaaccagaactcgcgcaatgccgcacccaac
catggctatcagcacccgttcaccgggcagggccaccagcaaccagacctcatcatcaac
ggcatgccactgccagagacggaaaattattcaattgactccagttacgtgaacagcaga
gcccacctcattaaaagtacgtcgacattcaaggacctggaggggaacagtctgaaggac
agcggccacgaggagagcgaccagaccgacagcgaacacgatgtccagcgaggccactac
gttgacacggctgtcaatgacatgctcaacatgaccgtacctcccaatgtttgccagctg
ccggatcaagctggagagcctgctgaaggcttccactgtcaagacgagtgccgaatcctt
ggacactccgaccgctgttggatgcctcgcgtcccgctgccagcacgcgtcaagtcgccc
gagcacgcccgcaatgtcattgctctgtcaatcgaggccaccacggtggacgttccccac
tatgaggacggcacaacgaagaggacttttgccacctttggcaaggacgggcccgaggat
gtggagcggggcgacgttaaagggaagcggactcacgagcctcaagtgtgcagccccaag
gccaatggtggcgccgtgcgtgaagccggcaacgggcgagaggcggccagccccatcact
tcccccgtgcacctgaagagccccatgtccaagccttcatctggctacaacacactgaaa
tgccgtgatgctgagcgcatcgccaaccacagtctgctacggcaaccggagggcaaagac
agtgagccgtcggtgcgggagttcaacacgcttctccatgatggtcgtgacaaggaatct
cccagcagcaagcgcttgaaggacattgtgctttag
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integrated database retrieval system
