KEGG   Syngnathoides biaculeatus (alligator pipefish): 133510929
Entry
133510929         CDS       T09681                                 
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
  KO
K05635  laminin, gamma 1
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04510  Focal adhesion
sbia04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    133510929 (lamc1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    133510929 (lamc1)
Motif
Pfam: Laminin_N Laminin_EGF Laminin_B Death Elf4
Other DBs
NCBI-GeneID: 133510929
NCBI-ProteinID: XP_061695415
LinkDB
Position
13:28299400..28325307
AA seq 1595 aa
MAASPRLSLLAAALAAAAMAVGVGAAMDECADEQGRAQRCMPEFVNAAFNVTVVATNTCG
SPPEEYCVQTGATGVTKSCHICDARDPRNQHGAAYLTDYNNQQDATWWQSQTMLAGVQYP
NAINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRSGEGGAWTPYAFYSGSCEKTYGKGN
RGFIRTGEDERRALCTDDFSDISPLTGGNVAFSTLEGRPGAYNFDRSPVLQDWVTATDIR
VTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECAKDGRGRLLCNCKHN
TEGADCQTCRPFYNDRPWRRATADDANECLPCECNGKSSECYFDAELYRATGHGGHCENC
ADNTDGPRCERCLDRHYRRDDGRCLPCACDAVGSESPQCDSRGVCACKAGVTGEKCDRCR
TGFHSLTEAGCRPCSCSPSGSTQECDVGTGRCRCKENVEGFTCDRCKPGFFNMDAGNAEG
CSPCFCFLHSSVCDSAPGFSVHTLRSAFERDDEQWTGQRRDSSGVPVEWSPGAQDISLVS
DDYFPVYFVAPDKFLGDQLLSFGQNLSLSFRVDRLDTRLSAEDLVLEGGGLRVAVPLIAQ
GNAYPSDEKHDYVFRLRDSADFPWRPPVSHSDFQKLLRNLTAIKIRGTYSEKSAGHLDDV
TLVTARRGPGVPARWVEQCTCPQGYEGQHCERCTPGYRRARPELGAFGACEACDCNGHGD
TCDARTGACDCQHDTAGLSCERCRNGFYGDATKGTASDCRPCPCPAGAGCAVVPKSGQVV
CTNCPAGTAGKRCELCDDGFFGDPLGEGGPVRPCRACRCSDNIDPNAVGNCDRETGECLK
CIYNTDGFFCDRCRDGFYGNPLAADKCKACACSPQGTAGAQTSCSAATGQCPCLPDVIQR
DCSACRPGFFNLRSGNGCERCNCDAVGSTNGQCDIDSGQCECQPGVAGPRCERCELNFFG
FGPSGCKPCDCDPEGAQSGQCQEDGLCRCRPGFVGARCDMCEENYFYNRSVPGCQQCPSC
YSLVRDKVNQHRQKIHELQTLIDNLASGQETVSDAAFEDRLKEAERAVLDLLDQARSSKD
VDLGLLERLNVINGTLTTQWNRLQNVRNTVERTGARADRARHRVRQAENLVERARRELDK
ARDAVAKVDIKSPSGDGEPNNMTLLAEEARKLADKHKMDADQIEKIAKDANDTSAKAYNL
LLKTLDGEGKTAQRIDELNGKYKEALELAANLEKQAAKVQAEAEAAGNHALKIFANLTGL
PPFDTRALEEEADKIKKEASDLDRLIDKTEKEYNELRDDLRPKEQEVRKLLETGRSEQQT
ADQLLARADAAKATAEEAAKKAQSTFREAESILDDLRDFDRRVNDNKTAAEDALRRIPAI
EATVAAARAKTRQAEAALGNADADAGHAKAKAEEAERIAANVQKGSAKSKEEAERALRDA
DKLDEEVDGMMDELSAAEDQLKKKKAEADRDMMMAAAASTNAKEAEDNARKAKSAVKTVL
STIAALLEQLGNIEKVDAGKLTQIDESLRRAKDKMADGELDRKLTELNDVARSQEAMIGD
YDRQIREIRADIANLNDIKNTLPDGCFNTPSLEKA
NT seq 4788 nt   +upstreamnt  +downstreamnt
atggcggcttctccgcggttgtcactcctggcggccgccctggcggcggcggccatggcg
gtcggcgtcggcgcggccatggacgagtgcgcggacgagcaggggcgcgcgcagcgctgc
atgccggagttcgtgaacgccgccttcaacgtcaccgtggtggccaccaacacgtgcggg
agcccccccgaggagtactgcgtccagacgggggccaccggggtcaccaagtcgtgccac
atctgcgacgcccgcgacccccgcaaccagcacggcgccgcgtacctgacggactacaac
aaccagcaggacgccacctggtggcagagccagaccatgctggcgggggtgcagtatccc
aatgccatcaacctcaccctgcacctcggcaaggcgttcgacatcacctacgtgcgcctc
aagttccacacgagccgtcccgagagcttcgccatctacaagcgcagcggcgagggcggc
gcctggacgccgtacgcgttctacagcggctcgtgcgagaagacgtacggcaagggcaac
cggggcttcatccgcaccggcgaggacgagcggcgggcgctgtgcaccgacgacttcagc
gacatctcgccgctcaccggcggcaacgtggccttctccacgctggaggggcggcccggc
gcctacaacttcgaccgcagccccgtcctgcaggactgggtgacggccacggacatccgc
gtgaccttgaaccggctcaacaccttcggcgacgaagtgttcaacgaccccaaagtgctc
aagtcgtactactacgccatctcggacttcgccgtgggcggaaggtgcaagtgcaacggc
cacgccagcgagtgcgcaaaggacggccgaggtcgtctgctgtgcaactgcaaacacaac
acggagggggccgactgccagacgtgccggcccttctacaacgaccgaccgtggaggcga
gccaccgccgacgacgccaacgagtgtctgccgtgcgagtgcaacgggaagagttccgag
tgctactttgacgccgagctgtaccgggccacgggacacggaggtcactgcgagaactgc
gccgacaacacggacggacccaggtgcgagcgctgcctggaccgccattacagacgcgac
gacggccgctgccttccctgcgcctgcgacgccgtcggttccgaatcccctcagtgcgac
agccgaggcgtgtgcgcgtgcaaagcgggcgtgacgggagaaaagtgcgaccgctgtcgg
acgggatttcacagcctcaccgaggccggatgcaggccgtgttcgtgctcgccttcggga
agcactcaggaatgcgacgtcggcacgggacggtgtcgctgcaaggagaacgtggaggga
ttcacctgcgacaggtgcaagccgggcttcttcaacatggacgccggtaacgccgaaggc
tgctctccgtgtttttgcttccttcactcgtccgtgtgcgacagcgcgcccggcttcagc
gtgcacacgctccgctccgcctttgagagagatgacgagcagtggacggggcagcgtcgc
gactcgtccggcgtgccggtcgagtggtcgcccggcgctcaggacatctcgctggtgtcc
gacgactacttccccgtgtacttcgtggcgccagacaagtttttgggtgatcagctgctg
agcttcggtcagaacctgagtctgagtttccgcgtggatcgcctcgacacccgcttgtcc
gccgaggacctggtcctggagggtggcggtctccgggtggccgtgcccctcatcgcccag
ggcaacgcctaccccagcgacgagaagcacgactacgtcttcagactccgcgacagcgcc
gacttcccgtggcggccgcccgtcagccattcagacttccagaaacttctccgcaacctg
acggccatcaagatccgcggcacctacagcgagaagagtgcgggtcacctggacgacgtg
accctggtgacggcccggaggggccccggggtcccggcccgctgggtggagcagtgcacg
tgccctcaaggctacgagggccagcactgcgagcgctgcacgcccggctaccgtcgggcc
cgcccggaactcggagccttcggtgcctgcgaggcctgcgactgcaacgggcacggcgac
acctgcgacgcccgcacgggcgcttgcgactgccaacacgacacggccggcctgagctgc
gagcgctgccgcaacggtttctacggcgacgccaccaaggggactgcgtcggactgccgg
ccgtgcccgtgtcccgccggcgccggctgcgccgtggtccccaagagcgggcaggtggtc
tgcaccaactgtcccgccggcaccgcaggcaagcggtgcgagctgtgcgacgacggattc
ttcggggaccccctgggcgaggggggtccggtgcgcccgtgccgcgcctgcaggtgcagc
gacaacatcgaccccaacgccgtgggcaactgcgaccgggagacgggcgagtgcctcaag
tgcatctacaacacggacggcttcttctgcgaccgatgccgggacggtttctacggcaac
cccctcgccgccgacaagtgcaaggcctgcgcctgctccccgcaagggacggcgggcgct
cagacgagctgctcggcggcgacgggccagtgcccgtgtttgcccgacgtgatccagcgc
gactgcagcgcctgccggccgggattcttcaacctgcggagtggaaacggctgcgagcgg
tgcaactgcgacgccgtcggctccaccaacggtcagtgcgacatcgacagcgggcagtgc
gagtgccagccgggcgtggccgggcccaggtgcgagcgctgcgagctcaacttcttcggc
ttcggcccgtccggatgcaaaccctgcgactgcgaccccgaaggcgcccagtcgggtcag
tgccaggaggacggactctgccggtgccggccgggcttcgtgggcgcccgctgcgacatg
tgcgaggagaactacttctacaaccgctcggtgcccggatgccagcagtgcccttcctgc
tacagtttggtgcgggacaaggtgaaccagcaccgtcagaagatccacgagctgcagacg
ctcatcgacaacctggcgtccggtcaggagacggtcagcgacgcggccttcgaagaccgc
ctgaaggaggctgagcgcgcggtcctggacctcctggaccaggcccgctccagcaaggac
gtggacctgggcctgctggagcgtctcaacgtcatcaacggcactctgaccacgcagtgg
aaccgtctgcagaacgtgcgcaacacggtggagcggacgggcgcgcgagcggatcgcgcg
cgccaccgcgtccgccaggccgagaacctcgtcgagcgagcccgacgggagctggacaag
gccagagacgccgtcgccaaagtggacatcaagtctccgagcggcgacggcgagcccaac
aacatgacgctgctggccgaggaagcgcgcaagttggccgacaagcacaagatggacgcc
gaccagatcgagaagatcgccaaagacgccaacgacacgtccgccaaggcgtacaacctg
ctcctcaagacgctcgacggcgaagggaagacggctcagcggatagacgagctcaacggg
aagtacaaagaggcgctggagctggctgccaatttggagaagcaggccgccaaagtccaa
gcggaggcggaggcggcgggaaaccacgccctcaagatcttcgccaacctcaccggcctg
ccgccctttgacacgcgcgccctggaggaggaggccgacaagatcaagaaggaggcgtcc
gacttggacagacttatcgacaagacggagaaggagtataacgagctgagggacgacctc
cggcccaaagagcaggaagtgcgcaaacttctggagacgggacgaagtgaacagcagacc
gccgaccagcttctggcccgcgccgacgcggccaaggcgacggcggaggaggccgccaag
aaggctcagtccaccttccgcgaggccgagagcatcctggacgacctgcgagacttcgac
aggcgcgtcaacgacaacaagacggcggccgaggacgccctgaggagaatcccggccatc
gaggccaccgtcgccgccgcccgcgccaagacccgccaggccgaggcggcgctgggaaac
gccgacgccgacgccgggcacgccaaggccaaggcggaggaggcggagcgaatcgccgcc
aacgtgcagaagggttcggccaaatccaaggaggaggcggagagagccctgcgggacgcc
gacaagctggacgaggaggtggacggcatgatggatgagctgagcgccgccgaggaccaa
ctgaagaagaagaaggccgaggccgaccgggacatgatgatggccgccgcggcgtcgact
aacgccaaggaggcggaggacaacgcccgcaaagctaaaagcgcagtcaagacggtcctc
agcaccatcgccgccctgctggagcaacttggaaacatcgagaaagtggacgcgggcaag
ctgacgcaaatcgacgagtcgctacgacgcgccaaggacaagatggccgacggcgagctg
gacaggaagttgacggaactgaacgacgtggcgcgctcgcaggaggccatgatcggcgac
tacgaccgtcagatccgcgaaatccgagcggacatcgccaacctcaacgacatcaagaac
acccttcccgacggctgcttcaacacgccgtccctggaaaaggcctaa

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