Syngnathoides biaculeatus (alligator pipefish): 133510929
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Entry
133510929 CDS
T09681
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04510
Focal adhesion
sbia04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133510929 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133510929 (lamc1)
BRITE hierarchy
Motif
Pfam:
Laminin_N
Laminin_EGF
Laminin_B
Death
Elf4
Motif
Other DBs
NCBI-GeneID:
133510929
NCBI-ProteinID:
XP_061695415
LinkDB
All DBs
Position
13:28299400..28325307
Genome browser
AA seq
1595 aa
AA seq
DB search
MAASPRLSLLAAALAAAAMAVGVGAAMDECADEQGRAQRCMPEFVNAAFNVTVVATNTCG
SPPEEYCVQTGATGVTKSCHICDARDPRNQHGAAYLTDYNNQQDATWWQSQTMLAGVQYP
NAINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRSGEGGAWTPYAFYSGSCEKTYGKGN
RGFIRTGEDERRALCTDDFSDISPLTGGNVAFSTLEGRPGAYNFDRSPVLQDWVTATDIR
VTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECAKDGRGRLLCNCKHN
TEGADCQTCRPFYNDRPWRRATADDANECLPCECNGKSSECYFDAELYRATGHGGHCENC
ADNTDGPRCERCLDRHYRRDDGRCLPCACDAVGSESPQCDSRGVCACKAGVTGEKCDRCR
TGFHSLTEAGCRPCSCSPSGSTQECDVGTGRCRCKENVEGFTCDRCKPGFFNMDAGNAEG
CSPCFCFLHSSVCDSAPGFSVHTLRSAFERDDEQWTGQRRDSSGVPVEWSPGAQDISLVS
DDYFPVYFVAPDKFLGDQLLSFGQNLSLSFRVDRLDTRLSAEDLVLEGGGLRVAVPLIAQ
GNAYPSDEKHDYVFRLRDSADFPWRPPVSHSDFQKLLRNLTAIKIRGTYSEKSAGHLDDV
TLVTARRGPGVPARWVEQCTCPQGYEGQHCERCTPGYRRARPELGAFGACEACDCNGHGD
TCDARTGACDCQHDTAGLSCERCRNGFYGDATKGTASDCRPCPCPAGAGCAVVPKSGQVV
CTNCPAGTAGKRCELCDDGFFGDPLGEGGPVRPCRACRCSDNIDPNAVGNCDRETGECLK
CIYNTDGFFCDRCRDGFYGNPLAADKCKACACSPQGTAGAQTSCSAATGQCPCLPDVIQR
DCSACRPGFFNLRSGNGCERCNCDAVGSTNGQCDIDSGQCECQPGVAGPRCERCELNFFG
FGPSGCKPCDCDPEGAQSGQCQEDGLCRCRPGFVGARCDMCEENYFYNRSVPGCQQCPSC
YSLVRDKVNQHRQKIHELQTLIDNLASGQETVSDAAFEDRLKEAERAVLDLLDQARSSKD
VDLGLLERLNVINGTLTTQWNRLQNVRNTVERTGARADRARHRVRQAENLVERARRELDK
ARDAVAKVDIKSPSGDGEPNNMTLLAEEARKLADKHKMDADQIEKIAKDANDTSAKAYNL
LLKTLDGEGKTAQRIDELNGKYKEALELAANLEKQAAKVQAEAEAAGNHALKIFANLTGL
PPFDTRALEEEADKIKKEASDLDRLIDKTEKEYNELRDDLRPKEQEVRKLLETGRSEQQT
ADQLLARADAAKATAEEAAKKAQSTFREAESILDDLRDFDRRVNDNKTAAEDALRRIPAI
EATVAAARAKTRQAEAALGNADADAGHAKAKAEEAERIAANVQKGSAKSKEEAERALRDA
DKLDEEVDGMMDELSAAEDQLKKKKAEADRDMMMAAAASTNAKEAEDNARKAKSAVKTVL
STIAALLEQLGNIEKVDAGKLTQIDESLRRAKDKMADGELDRKLTELNDVARSQEAMIGD
YDRQIREIRADIANLNDIKNTLPDGCFNTPSLEKA
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttctccgcggttgtcactcctggcggccgccctggcggcggcggccatggcg
gtcggcgtcggcgcggccatggacgagtgcgcggacgagcaggggcgcgcgcagcgctgc
atgccggagttcgtgaacgccgccttcaacgtcaccgtggtggccaccaacacgtgcggg
agcccccccgaggagtactgcgtccagacgggggccaccggggtcaccaagtcgtgccac
atctgcgacgcccgcgacccccgcaaccagcacggcgccgcgtacctgacggactacaac
aaccagcaggacgccacctggtggcagagccagaccatgctggcgggggtgcagtatccc
aatgccatcaacctcaccctgcacctcggcaaggcgttcgacatcacctacgtgcgcctc
aagttccacacgagccgtcccgagagcttcgccatctacaagcgcagcggcgagggcggc
gcctggacgccgtacgcgttctacagcggctcgtgcgagaagacgtacggcaagggcaac
cggggcttcatccgcaccggcgaggacgagcggcgggcgctgtgcaccgacgacttcagc
gacatctcgccgctcaccggcggcaacgtggccttctccacgctggaggggcggcccggc
gcctacaacttcgaccgcagccccgtcctgcaggactgggtgacggccacggacatccgc
gtgaccttgaaccggctcaacaccttcggcgacgaagtgttcaacgaccccaaagtgctc
aagtcgtactactacgccatctcggacttcgccgtgggcggaaggtgcaagtgcaacggc
cacgccagcgagtgcgcaaaggacggccgaggtcgtctgctgtgcaactgcaaacacaac
acggagggggccgactgccagacgtgccggcccttctacaacgaccgaccgtggaggcga
gccaccgccgacgacgccaacgagtgtctgccgtgcgagtgcaacgggaagagttccgag
tgctactttgacgccgagctgtaccgggccacgggacacggaggtcactgcgagaactgc
gccgacaacacggacggacccaggtgcgagcgctgcctggaccgccattacagacgcgac
gacggccgctgccttccctgcgcctgcgacgccgtcggttccgaatcccctcagtgcgac
agccgaggcgtgtgcgcgtgcaaagcgggcgtgacgggagaaaagtgcgaccgctgtcgg
acgggatttcacagcctcaccgaggccggatgcaggccgtgttcgtgctcgccttcggga
agcactcaggaatgcgacgtcggcacgggacggtgtcgctgcaaggagaacgtggaggga
ttcacctgcgacaggtgcaagccgggcttcttcaacatggacgccggtaacgccgaaggc
tgctctccgtgtttttgcttccttcactcgtccgtgtgcgacagcgcgcccggcttcagc
gtgcacacgctccgctccgcctttgagagagatgacgagcagtggacggggcagcgtcgc
gactcgtccggcgtgccggtcgagtggtcgcccggcgctcaggacatctcgctggtgtcc
gacgactacttccccgtgtacttcgtggcgccagacaagtttttgggtgatcagctgctg
agcttcggtcagaacctgagtctgagtttccgcgtggatcgcctcgacacccgcttgtcc
gccgaggacctggtcctggagggtggcggtctccgggtggccgtgcccctcatcgcccag
ggcaacgcctaccccagcgacgagaagcacgactacgtcttcagactccgcgacagcgcc
gacttcccgtggcggccgcccgtcagccattcagacttccagaaacttctccgcaacctg
acggccatcaagatccgcggcacctacagcgagaagagtgcgggtcacctggacgacgtg
accctggtgacggcccggaggggccccggggtcccggcccgctgggtggagcagtgcacg
tgccctcaaggctacgagggccagcactgcgagcgctgcacgcccggctaccgtcgggcc
cgcccggaactcggagccttcggtgcctgcgaggcctgcgactgcaacgggcacggcgac
acctgcgacgcccgcacgggcgcttgcgactgccaacacgacacggccggcctgagctgc
gagcgctgccgcaacggtttctacggcgacgccaccaaggggactgcgtcggactgccgg
ccgtgcccgtgtcccgccggcgccggctgcgccgtggtccccaagagcgggcaggtggtc
tgcaccaactgtcccgccggcaccgcaggcaagcggtgcgagctgtgcgacgacggattc
ttcggggaccccctgggcgaggggggtccggtgcgcccgtgccgcgcctgcaggtgcagc
gacaacatcgaccccaacgccgtgggcaactgcgaccgggagacgggcgagtgcctcaag
tgcatctacaacacggacggcttcttctgcgaccgatgccgggacggtttctacggcaac
cccctcgccgccgacaagtgcaaggcctgcgcctgctccccgcaagggacggcgggcgct
cagacgagctgctcggcggcgacgggccagtgcccgtgtttgcccgacgtgatccagcgc
gactgcagcgcctgccggccgggattcttcaacctgcggagtggaaacggctgcgagcgg
tgcaactgcgacgccgtcggctccaccaacggtcagtgcgacatcgacagcgggcagtgc
gagtgccagccgggcgtggccgggcccaggtgcgagcgctgcgagctcaacttcttcggc
ttcggcccgtccggatgcaaaccctgcgactgcgaccccgaaggcgcccagtcgggtcag
tgccaggaggacggactctgccggtgccggccgggcttcgtgggcgcccgctgcgacatg
tgcgaggagaactacttctacaaccgctcggtgcccggatgccagcagtgcccttcctgc
tacagtttggtgcgggacaaggtgaaccagcaccgtcagaagatccacgagctgcagacg
ctcatcgacaacctggcgtccggtcaggagacggtcagcgacgcggccttcgaagaccgc
ctgaaggaggctgagcgcgcggtcctggacctcctggaccaggcccgctccagcaaggac
gtggacctgggcctgctggagcgtctcaacgtcatcaacggcactctgaccacgcagtgg
aaccgtctgcagaacgtgcgcaacacggtggagcggacgggcgcgcgagcggatcgcgcg
cgccaccgcgtccgccaggccgagaacctcgtcgagcgagcccgacgggagctggacaag
gccagagacgccgtcgccaaagtggacatcaagtctccgagcggcgacggcgagcccaac
aacatgacgctgctggccgaggaagcgcgcaagttggccgacaagcacaagatggacgcc
gaccagatcgagaagatcgccaaagacgccaacgacacgtccgccaaggcgtacaacctg
ctcctcaagacgctcgacggcgaagggaagacggctcagcggatagacgagctcaacggg
aagtacaaagaggcgctggagctggctgccaatttggagaagcaggccgccaaagtccaa
gcggaggcggaggcggcgggaaaccacgccctcaagatcttcgccaacctcaccggcctg
ccgccctttgacacgcgcgccctggaggaggaggccgacaagatcaagaaggaggcgtcc
gacttggacagacttatcgacaagacggagaaggagtataacgagctgagggacgacctc
cggcccaaagagcaggaagtgcgcaaacttctggagacgggacgaagtgaacagcagacc
gccgaccagcttctggcccgcgccgacgcggccaaggcgacggcggaggaggccgccaag
aaggctcagtccaccttccgcgaggccgagagcatcctggacgacctgcgagacttcgac
aggcgcgtcaacgacaacaagacggcggccgaggacgccctgaggagaatcccggccatc
gaggccaccgtcgccgccgcccgcgccaagacccgccaggccgaggcggcgctgggaaac
gccgacgccgacgccgggcacgccaaggccaaggcggaggaggcggagcgaatcgccgcc
aacgtgcagaagggttcggccaaatccaaggaggaggcggagagagccctgcgggacgcc
gacaagctggacgaggaggtggacggcatgatggatgagctgagcgccgccgaggaccaa
ctgaagaagaagaaggccgaggccgaccgggacatgatgatggccgccgcggcgtcgact
aacgccaaggaggcggaggacaacgcccgcaaagctaaaagcgcagtcaagacggtcctc
agcaccatcgccgccctgctggagcaacttggaaacatcgagaaagtggacgcgggcaag
ctgacgcaaatcgacgagtcgctacgacgcgccaaggacaagatggccgacggcgagctg
gacaggaagttgacggaactgaacgacgtggcgcgctcgcaggaggccatgatcggcgac
tacgaccgtcagatccgcgaaatccgagcggacatcgccaacctcaacgacatcaagaac
acccttcccgacggctgcttcaacacgccgtccctggaaaaggcctaa
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