Syngnathoides biaculeatus (alligator pipefish): 133513054
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Entry
133513054 CDS
T09681
Symbol
lrfn5a
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
133513054 (lrfn5a)
Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
133513054 (lrfn5a)
BRITE hierarchy
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_5
LRR_1
ig
Ig_2
LRR_9
fn3
DHU1_N
C2-set_2
Rop
Ig_5
Motif
Other DBs
NCBI-GeneID:
133513054
NCBI-ProteinID:
XP_061699326
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All DBs
Position
15:complement(5359731..5520610)
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AA seq
864 aa
AA seq
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MTEEGLVGQTSVEFCQAVTMERLLLCVMLAVAMAVRAQICPKRCVCQILSPNLATLCAKK
GLLFVPPNIDRHTVELRLADNFVTSVKRKDFANMTRLVDLTLSRNTISYITPHAFTDLEN
LRALHLNSNRLTRIGNDTFSGMSKLHHLILNNNQLVLIHQGAFNDLLALEELDLSYNNLD
SIPWEAIQKMTSLHTLSLDHNMLDFIPEGTFSLLQKLNRLDVTSNKLLKLPPDPLFQRAQ
VLVTSGMLSSSTFALSFGGNPLHCNCELLWLRRLNREDDLETCASPQHLSGRYFWSIPEE
EFLCEPPLITRYSQEMRVLEGQRVSLRCKARGDPEPAIHWISPDGKLVSNSSRTLVYMNG
SLDILISTVKDTGSFTCISSNPAGEAHQTIDLVVIKLPHISNNTNNIQEPDPGSSDISTS
TRTGNNGSNVTGDVKGGADKRVVTAEATSSTALIKFNFQRNIPGIRMFQIQYNGSQDDSL
VYRMIPPSSKSFLVNNLAAGSQYDLCVLAIYDDIMTSLTATRVVGCVQFTTESEYMRCHF
MQSQFLGGTMIIIIGGIIVASVLVFIIILMIRYKVCNPGDSVKGMSLSMTNVHSQTNGQQ
SERCSVTPSTSKHGSIGLEDLSGGSKKRSGAGGGKDAITLSSNSSLPDCSTATSLLTQQW
TTVGAEEQEKACQERAITSISSPTATSSLTRSKRKPAPMKPGSACSNISAALENLSHPPS
SSASSTSSTLPPLDTLNTNRNNSTSLNQAQPAPIATPSPLHCIRYQETPILRRVPRARTS
STAKYQTLPVEEGGKSRTRRRYSLSEGGSKTLSSQRESAAAPKLGRIVRYKRSQSMSGMV
FSKEREGDSDRGRCDSDWILESTV
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggaagggttggttggacaaacaagtgtcgagttctgtcaggcagtgaccatg
gagagactgttgctgtgtgtaatgctagcagttgccatggctgttcgcgcacagatctgc
ccaaagcgctgcgtatgtcagatcctctcacccaatctggcaaccctctgtgccaaaaaa
ggtctactatttgttccaccaaacatcgacagacatacagtcgaactgaggctggctgac
aactttgtcacgagtgtgaagaggaaagactttgcaaacatgacacggcttgtagactta
acgttatccagaaacaccatctcctacattacacctcatgcctttactgatcttgagaac
ctcagagccctccatctcaacagtaatcggctgacaaggatcggcaatgacactttcagt
gggatgtccaagctacaccacctaattctgaacaacaaccagttggtactgatccaccag
ggagcattcaatgacctgcttgcactggaagaactggatctcagttataataacctagat
tccattccatgggaggccatccagaaaatgacaagtctccatacattgagtttggaccac
aacatgttggactttattccagagggaacattttcattgctgcagaaactcaaccggctc
gacgtcacctccaataaactcctaaagctccctccggatcctctttttcagcgagcacag
gttctggtcacatctgggatgctgagctcctcgacctttgcactgtcatttggcggaaac
ccactacattgcaactgtgagctactttggctacgaaggcttaatcgagaggatgactta
gagacatgtgcctcacctcagcacctctctggacgatacttttggtctattcctgaagaa
gagttcctgtgtgaacctccgctcataaccagatattcccaagagatgagggtgctcgaa
gggcagagagtgtcactcagatgtaaggccagaggtgacccagagccagcaatacactgg
atatctcctgatggcaaactcgtttcaaactcatcaagaacactggtttacatgaatgga
agtctggatatcctcatcagtactgtaaaagacacgggctctttcacctgcatctcctcc
aaccctgccggtgaagcccaccagactatagacttggttgtcattaaactcccacatatc
tccaacaacaccaacaacatccaagagcctgatccaggatcctctgacatttccacatcc
acccgaactggaaacaatggaagcaatgttactggcgatgtaaagggtggggcagacaag
agggtggtgactgctgaagctacatcatcaactgcattgatcaagtttaacttccagagg
aatattccaggtattcggatgttccagatacagtataatgggagccaggatgactcactt
gtgtatcgaatgatccctccatcaagcaagagtttcttggtcaacaacctagcagcagga
agccagtacgatctgtgtgtgctcgccatctatgatgacatcatgacctccctgacagca
acccgcgtggtgggatgtgtgcagttcaccaccgaatcagaatatatgaggtgtcatttc
atgcagtcccaattccttggtgggactatgatcatcatcatcggagggattatagtggct
tcagtgctcgttttcatcatcattttgatgatacggtacaaggtgtgtaacccaggagac
agtgttaaaggcatgtcactgtctatgaccaacgttcactctcagacaaatggccagcag
tcggaaaggtgcagtgtaactcccagcacctccaagcacggctcaattggattagaggac
ctctcaggaggttcaaagaagaggagtggagcaggaggaggcaaagatgcgataactctt
tcatccaactcatccctgccggactgctccacagccacctctcttcttacgcagcagtgg
acaacagttggagctgaggaacaggagaaagcgtgtcaggagagagctataaccagtata
tcctcacccactgccaccagctcacttaccaggtcaaagcgtaagcctgctccgatgaaa
cctggttcggcttgctctaacatctcagctgccttggagaatctctctcaccctccttcc
tcatctgcctctagcacctcctctactctccctcctctagataccctcaacaccaaccgt
aacaattccacctcactaaaccaagcccagcccgctcccattgccaccccgagtccactt
cactgcatccgatatcaagaaacacccattctgcgccgggttcctcgtgcccgcacctcc
tccactgcaaaataccagactctccctgtggaggagggagggaagagcaggacaaggaga
aggtactccctcagtgaaggaggctcaaagactctctcatcccagagagaaagtgcagca
gcaccaaaattaggacgtatagtgcggtacaaaaggagtcaatcaatgagtggaatggtt
ttctccaaagaaagagagggagactctgatcgagggcgctgtgattctgactggatcttg
gaaagcacggtttaa
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