Sphingomonas bisphenolicum: SBA_ch1_34970
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Entry
SBA_ch1_34970 CDS
T08354
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sbin
Sphingomonas bisphenolicum
Pathway
sbin00470
D-Amino acid metabolism
sbin00550
Peptidoglycan biosynthesis
sbin01100
Metabolic pathways
sbin01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sbin00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SBA_ch1_34970 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SBA_ch1_34970 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SBA_ch1_34970 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbin01011
]
SBA_ch1_34970 (ddl)
Enzymes [BR:
sbin01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SBA_ch1_34970 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
sbin01011
]
Precursor biosynthesis
Amino acid ligase
SBA_ch1_34970 (ddl)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
BBF71297
LinkDB
All DBs
Position
1:complement(3546426..3547391)
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AA seq
321 aa
AA seq
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MTRGPWHVAVLMGGWSAERPVSLSSGEGVAKALESRGHTVTRIDMDRNVAARLAEARADV
IFNALHGVPGEDGTVQGMMDLMGLTYTHSGLATSVIAIDKQLTKQALVPHGIPMPGGQIV
ESESLFTADPLPRPYVLKPVNEGSSVGVAIVTAEGNYGNPIARGSVGPWQDFPELLAEPY
IRGRELTTAVLGDEALLVTELRPKSGFYDFDAKYTDGMTEHVCPADLPPEITEACKAIAL
RAHQLLGCKGASRADFRWDDTQGIEGLFLLEVNTQPGMTPLSLVPEQAAKLGIDYATLVE
TIVEEALNRAQGPDKAGNGDG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgtggcccctggcatgtcgccgtcctcatgggcggctggtcggcggaacgcccc
gtctctttgtcctccggcgaaggtgtggccaaggcgctggaatcgcgcggccataccgtc
acccgcatcgacatggaccgcaacgtcgccgcccgcctggcggaggccagggcggacgtg
atcttcaacgcgctgcacggcgttccgggcgaagacggcacggtgcagggcatgatggac
ctgatgggcctcacctacacccatagcggccttgccacctcggtgatcgcgatcgacaag
caattgaccaagcaggcgctcgtgccccacggcatccccatgcccggcggccagatcgtg
gaaagcgaaagcctcttcaccgccgatccgctgccgcgcccctatgtgctcaaacccgtc
aacgagggcagctcggtcggcgtcgccatcgtcacggccgagggcaattatggtaacccc
atcgcccgcggcagcgtcggtccatggcaggattttcccgaactgcttgccgaaccctat
attcgcggccgcgaactcaccacggcggttctgggcgatgaggcactgctcgtcaccgaa
ttgcgtcccaagagcggattctacgatttcgacgccaaatataccgacggcatgaccgaa
catgtctgccccgccgacctgccgccggagattaccgaggcctgcaaggcgatcgcgctg
cgcgcccaccagttgctgggctgcaagggcgcatcgcgcgccgatttccgctgggacgac
acgcaggggatcgaagggcttttcctgctggaggtcaatacccagccgggcatgaccccg
ctcagcctcgtccccgaacaggcggcaaagctgggcattgactatgccacgctggtggag
actattgtcgaggaggcgctgaaccgcgcccaagggccagacaaggcaggaaatggtgat
ggctga
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