Shewanella benthica: SHEWBE_0876
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Entry
SHEWBE_0876 CDS
T06707
Name
(GenBank) Type IV pilus biogenesis protein PilQ
KO
K02666
type IV pilus assembly protein PilQ
Organism
sbk
Shewanella benthica
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sbk02044
]
SHEWBE_0876
02035 Bacterial motility proteins [BR:
sbk02035
]
SHEWBE_0876
Secretion system [BR:
sbk02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
SHEWBE_0876
Bacterial motility proteins [BR:
sbk02035
]
Pilus system
Pilus assembly proteins
SHEWBE_0876
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
AMIN
Secretin_N
STN
type_II_gspD_N0
Motif
Other DBs
NCBI-ProteinID:
SQH74845
UniProt:
A0A330LYA1
LinkDB
All DBs
Position
SHEWBE:800702..802747
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AA seq
681 aa
AA seq
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MESSAAIKNVVNKSSLFRVLGAFILIVSASYAAAENRLVDVKFHSVVDHQLELQLIFEHE
VMAPEIELKASPAEIILGFSGSISGLEKQTMPISTVGVESISVHQVDGLMRVTVALNKVK
AYKGKLKGNTYNLTINDEVADRNMTTQNPFINGINNIDFRRTADGGGELLIKLNNSSVAA
NVKQVGSKLELQLYNTDIGSDLLYVMDVQDFATPVRSFETFKEELTARILIDISGQYEYN
YQQEGSLFRLSIKKAEKFAVVKQEKKYNGRSLSLNFQSISVRTVLQIIADYNDFNLVTSD
TVEGDITLRLDDVPWDQALDLILQTKGLDKRIEGNILMIAPREELAIRERQQLENQLEVK
KLAPLYSEYLQINYAKASDIAELLKSEDSSLLTSRGSAAVDERTNTLLVRDTAETLENVH
RLIEVLDIPIRQVLIEARMVTVKDNVSEDLGIQWGITDQQGDYGTSGSLGGAQSIANGII
PALADRLNVALPAPAGSASIAFHVARLADGTILDMELSALEQENRGEIIASPRIVTSNQK
AAYIEQGVQIPYIESSSSGATTVSFKKAVLSLRVTPHITPDNRVILDLEITQDSQGAVVA
TPLGEAVSIDTQRIGTQVLVNHGETIVLGGIYQQNLISRVTKVPILGDIPFLGFLFRSTS
DSNERQELLIFVTPKIISEDL
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggaatcttctgccgcgataaaaaacgttgttaataaatcttctctttttagagttctt
ggtgcttttatactaattgtgagtgcctcttacgctgcggccgaaaaccgcctggtggat
gttaaatttcactcagttgtcgatcatcaactagaactgcaattaatcttcgaacatgaa
gtgatggcacctgaaattgagctcaaggcttcaccggctgaaattattttaggttttagt
ggcagtatctctgggttagagaaacagacaatgccaataagtaccgtcggagttgagagc
atcagtgtgcatcaggttgatggcttgatgcgggtgacggttgcactgaataaggtcaaa
gcctataagggcaagctcaagggtaatacctataacctgacgataaatgatgaggtcgcc
gatcgcaatatgacgacacaaaatccatttattaacgggattaacaatatcgatttcaga
cgaactgcagatggtggcggagaattattgattaagctgaacaatagttcggttgccgca
aacgtgaaacaggtcggttcaaaacttgagctgcagctttataataccgacattggttcc
gatctcctgtatgtgatggatgtacaagattttgccactccagtgcgtagttttgaaacc
tttaaagaagaattaaccgcgcgaattctcatcgatatctcaggccagtatgaatataat
taccagcaggaaggtagtctgtttcgtctcagtattaagaaggctgagaagtttgcggta
gttaaacaggagaaaaagtataatgggcgttcactgtcgctaaacttccaaagtatctcg
gtgagaaccgtattacagattatcgcggattataacgattttaacttagtcaccagtgat
accgtcgaaggtgatattaccctgcgtctggatgatgtcccttgggatcaggctctggat
cttattttgcagactaaagggctggataagcgcatcgaaggtaatattcttatgatcgcg
cctcgtgaagagttagcgattcgtgagaggcagcagttagagaatcagctggaagtaaaa
aagttagcgcctttatattctgaatacttacagataaattacgctaaagcgtcagatatt
gctgaattgttgaagagtgaagattcgagcctgttgacttctcggggaagtgccgccgtt
gatgaacgtaccaatactctgttagtcagagatactgcagagacgttagagaatgtgcac
cggctaatcgaagtactggatatccccattcgccaggttcttatcgaggctcgaatggtg
acggtgaaagataatgtttcggaagatcttggtattcaatggggcatcacagatcagcaa
ggcgactatggtacttcgggaagtttggggggggcccagagcatagcaaatggcatcata
cccgctctggctgaccgactaaacgttgccttacctgcaccggctggctctgcaagtatc
gcgtttcatgtggccaggttggcagatggcaccatactcgacatggaattgagtgcctta
gagcaagagaataggggagaaatcatcgccagtccgcgtatagtgacctcgaaccagaag
gcggcatacatagagcaaggtgtacagataccttatatcgagtctagctccagtggtgca
accacggttagctttaagaaggccgtattgtcattgcgggtgacaccgcacattacgcca
gataatcgagtgattttggatttagagatcacgcaagattctcaaggggcggtggttgct
acgcctctgggtgaagctgtttctatcgatactcagaggatcggcactcaggtgctggtg
aaccatggtgaaaccatagtcttaggtggcatttatcaacaaaatttgatcagccgtgtg
actaaagtaccgatattgggggatatccccttcctaggttttcttttcaggagcacttca
gactctaatgagcgacaagaactgttgatttttgttacgcccaagattatctctgaagac
ctataa
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