Shewanella benthica: SHEWBE_2911
Help
Entry
SHEWBE_2911 CDS
T06707
Symbol
dapE
Name
(GenBank) N-succinyl-diaminopimelate deacylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
sbk
Shewanella benthica
Pathway
sbk00300
Lysine biosynthesis
sbk01100
Metabolic pathways
sbk01120
Microbial metabolism in diverse environments
sbk01230
Biosynthesis of amino acids
Module
sbk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SHEWBE_2911 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbk01002
]
SHEWBE_2911 (dapE)
Enzymes [BR:
sbk01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
SHEWBE_2911 (dapE)
Peptidases and inhibitors [BR:
sbk01002
]
Metallo peptidases
Family M20
SHEWBE_2911 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
SQH76874
UniProt:
A0A330M663
LinkDB
All DBs
Position
SHEWBE:2807177..2808307
Genome browser
AA seq
376 aa
AA seq
DB search
MSQDVLTLAQDLISRPSVTPLDEGCQQLMADRLAKVGFDIEPMVFEDTTNMWARRGTEKP
LFCFAGHTDVVPVGDLNRWHTPPFDPVVIDGYLHGRGAADMKGSLAAMLVATERFVEKNP
DHKGSIAFLITSDEEGPFINGTTRVIDTLEARNEKITWSLVGEPSSTHKLGDIVKNGRRG
SLTGNLTVNGIQGHVAYPHLADNPIHKAMPALDELAKMKWDKGNEYFPPTSFQIANINGG
TGASNVIPGALEVMFNFRYSTEVTAEILIQRVLNILDAHGLEYDISWIFNGLPFLTGDGP
LLDATKAAIKQVTGTDTDPQTTGGTSDGRFIAPTGAQVIELGPVNATIHKVNECVKVDDI
EQLALCYEVILEKLLC
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaggatgtattaacgctggcgcaagatcttatctctcgcccctcagtcacacca
ctggacgaaggctgtcagcagttaatggccgacaggttggctaaggtcggtttcgacatt
gaacctatggtgttcgaagacaccaccaacatgtgggccagacgcggcaccgaaaaaccg
ctattttgcttcgccggtcataccgatgtggtgcctgtgggcgatctcaatcgttggcac
acgccaccattcgaccctgtcgttatcgatggctatctgcacggccgcggcgccgccgat
atgaagggctcgctcgccgccatgttggtggcgacagagcgtttcgtcgagaaaaacccg
gatcataagggctccatcgccttcttgatcaccagtgacgaagagggacctttcatcaac
ggcaccactcgcgtcatagacaccttagaggcccgtaatgagaagatcacctggtctctg
gtcggtgagccctcatcgactcataagctaggtgatatcgtcaagaatggtcgccgcggt
agcctcactggtaacttaactgtcaatggtattcagggccatgtggcctaccctcacctt
gcggataatccaattcataaggcgatgccagccttagatgagttggctaagatgaagtgg
gataagggcaatgaatacttcccccccaccagcttccagatagccaatatcaatggtggc
acaggcgcatctaatgtgatccctggggcattagaagtcatgtttaacttccgctattcc
accgaggtcaccgccgagatccttatccaacgtgtgctcaatatcttagatgcacacgga
ttagaatacgatatcagctggatttttaacggcctgccatttctcaccggtgatggacct
ctgctcgatgcgaccaaagcagccatcaagcaagtcacgggaactgataccgatccacaa
accacaggtggtacatctgatggacgctttatcgcccctactggcgcacaagtgatagag
cttggcccggtcaacgccacgattcacaaagtgaatgagtgcgttaaagtggatgatatc
gaacaactagcgctttgttatgaagttatattggagaaattactttgctaa
DBGET
integrated database retrieval system
